Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
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Accession | NC_002944 |
Length | 4,829,781 |
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The map label for this gene is dmpP [H]
Identifier: 41409949
GI number: 41409949
Start: 4312318
End: 4313499
Strand: Reverse
Name: dmpP [H]
Synonym: MAP3851c
Alternate gene names: 41409949
Gene position: 4313499-4312318 (Counterclockwise)
Preceding gene: 41409950
Following gene: 41409948
Centisome position: 89.31
GC content: 70.98
Gene sequence:
>1182_bases GTGAGCCTCGAGGACGCCGAAGCGCTGCGGGTGCTGCGCGACGCCTTCGCGCCCTGCGATGCGGGCCGCCCGGGCGATTC CGGTGATCTGGTGCACCGCTTCTATACGCATTGGTTCGCCCTCGACCCCTCGGTGCGCGATCTGTTCCCGCCCGAAATGG GCGCCCAGCGCGTGGCTTTCGGCCACGCGCTGCACTGGGTGTACGGCGAGCTGGTGGCGCGGCGGGCGCAGGAGCCGGTG GCGTTTCTGGCCCAACTCGGGCGGGATCATCGCAAATACGGTGTGCTGCCCCGGCATTACCAAACCCTGAGTCGCGCGCT GCTGGCCACGCTGCGCTCGCATCTGGACGCGGCCTGGACCGACGCCGTCGAGGACGCGGCCCGCACATCGCTCAACCTGA TCACCGGGGTGATGAGCGGGGCCGCGGACGCCGACGAGGGGCCGGCCTGGTGGGACGGCACCGTCATCGAGCACCTGCGG GTGTCCCGGGATCTGGCGGTGGTCCGGCTGCGGCTCGATCAGCCGATGCCCTATCACCCCGGCCAGTACGTCAACGTCCA GGTGCCGCAATGCCCGCGCCGCTGGCGGTATCTGAGCCCGGCCATTCCGGCCGACCCGGGCTGCGGGATCGAGTTTCACG TCCGCCTGGTCCCCGGCGGCCTGGTCAGCACCGCGATCGTCAACGAAACCCGGCCCGGCGACCGCTGGCGGCTGTCCAGT CCGCACGGCGGCCTGCGGGTCGACCGCGACGGCGGCGACGTGTTGATGGTCGCCGGCAGCACCGGCCTGGCGCCGCTGCG GGCGCTGATCATGGACCTGTCCCGGTTTGCGGTGAACCCGCGGGTGCACCTGTTCTTCGGTGCGCGCTACCGCTGCGAGC TCTACGACCTGCCGACCTTGTGGCAGATCGCATCCCACAATCCGTGGCTGTCGGTGTCGCCGGTGTCGGAGTACCGGGCC GACCCGCCGTGGGCCGCCGACTATCCCGACGTCACACCGCCGCGGGGGCTGCACGTGCACCAGACCGGACGGCTACCCGA GGTGGTGACCAAGTACGGGGGCTGGGGCGACCGGCAGGTCCTGATCTGCGGCGGGCCCAGGATGGTCGCCGCCACCAAGG CCGCGCTGATCGCCAAAGGCGCTGCAGCCCAACGTATTCAGCATGACCCCTTGTCGAGGTGA
Upstream 100 bases:
>100_bases TTGTGTACCACTGGGGTTCACCCAAGGTCGTCAACGCCGGTTCCGGCAACGTCGTTCGACAGGGCTGAGCCGGCGGTTCG CGAGCCTAGAATCGGGCCCC
Downstream 100 bases:
>100_bases GCTAGCCATGGATGTCGTCGCGCTGCGCGATCCCGTGTCGTCGGTCGTCGCCCGCTTCGTCCCGCGGGCGGGCATGATCG GCACGTCGCTGCGCGACGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Phenol 2-monooxygenase P5 component [H]
Number of amino acids: Translated: 393; Mature: 392
Protein sequence:
>393_residues MSLEDAEALRVLRDAFAPCDAGRPGDSGDLVHRFYTHWFALDPSVRDLFPPEMGAQRVAFGHALHWVYGELVARRAQEPV AFLAQLGRDHRKYGVLPRHYQTLSRALLATLRSHLDAAWTDAVEDAARTSLNLITGVMSGAADADEGPAWWDGTVIEHLR VSRDLAVVRLRLDQPMPYHPGQYVNVQVPQCPRRWRYLSPAIPADPGCGIEFHVRLVPGGLVSTAIVNETRPGDRWRLSS PHGGLRVDRDGGDVLMVAGSTGLAPLRALIMDLSRFAVNPRVHLFFGARYRCELYDLPTLWQIASHNPWLSVSPVSEYRA DPPWAADYPDVTPPRGLHVHQTGRLPEVVTKYGGWGDRQVLICGGPRMVAATKAALIAKGAAAQRIQHDPLSR
Sequences:
>Translated_393_residues MSLEDAEALRVLRDAFAPCDAGRPGDSGDLVHRFYTHWFALDPSVRDLFPPEMGAQRVAFGHALHWVYGELVARRAQEPV AFLAQLGRDHRKYGVLPRHYQTLSRALLATLRSHLDAAWTDAVEDAARTSLNLITGVMSGAADADEGPAWWDGTVIEHLR VSRDLAVVRLRLDQPMPYHPGQYVNVQVPQCPRRWRYLSPAIPADPGCGIEFHVRLVPGGLVSTAIVNETRPGDRWRLSS PHGGLRVDRDGGDVLMVAGSTGLAPLRALIMDLSRFAVNPRVHLFFGARYRCELYDLPTLWQIASHNPWLSVSPVSEYRA DPPWAADYPDVTPPRGLHVHQTGRLPEVVTKYGGWGDRQVLICGGPRMVAATKAALIAKGAAAQRIQHDPLSR >Mature_392_residues SLEDAEALRVLRDAFAPCDAGRPGDSGDLVHRFYTHWFALDPSVRDLFPPEMGAQRVAFGHALHWVYGELVARRAQEPVA FLAQLGRDHRKYGVLPRHYQTLSRALLATLRSHLDAAWTDAVEDAARTSLNLITGVMSGAADADEGPAWWDGTVIEHLRV SRDLAVVRLRLDQPMPYHPGQYVNVQVPQCPRRWRYLSPAIPADPGCGIEFHVRLVPGGLVSTAIVNETRPGDRWRLSSP HGGLRVDRDGGDVLMVAGSTGLAPLRALIMDLSRFAVNPRVHLFFGARYRCELYDLPTLWQIASHNPWLSVSPVSEYRAD PPWAADYPDVTPPRGLHVHQTGRLPEVVTKYGGWGDRQVLICGGPRMVAATKAALIAKGAAAQRIQHDPLSR
Specific function: Probable electron transfer from NADPH, via FAD and the 2Fe-2S center, to the oxygenase activity site of the enzyme [H]
COG id: COG0543
COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding FR-type domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006058 - InterPro: IPR012675 - InterPro: IPR017927 - InterPro: IPR001041 - InterPro: IPR008333 - InterPro: IPR001433 - InterPro: IPR001221 - InterPro: IPR017938 [H]
Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]
EC number: =1.14.13.7 [H]
Molecular weight: Translated: 43481; Mature: 43350
Theoretical pI: Translated: 8.25; Mature: 8.25
Prosite motif: PS01033 GLOBIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLEDAEALRVLRDAFAPCDAGRPGDSGDLVHRFYTHWFALDPSVRDLFPPEMGAQRVAF CCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHEECCCHHHCCCCCCCCHHHHH GHALHWVYGELVARRAQEPVAFLAQLGRDHRKYGVLPRHYQTLSRALLATLRSHLDAAWT HHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH DAVEDAARTSLNLITGVMSGAADADEGPAWWDGTVIEHLRVSRDLAVVRLRLDQPMPYHP HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCEEEEEEEECCCCCCCC GQYVNVQVPQCPRRWRYLSPAIPADPGCGIEFHVRLVPGGLVSTAIVNETRPGDRWRLSS CCEEEEECCCCCCHHCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHCCCCCCCCEEECC PHGGLRVDRDGGDVLMVAGSTGLAPLRALIMDLSRFAVNPRVHLFFGARYRCELYDLPTL CCCCEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEEECCCHH WQIASHNPWLSVSPVSEYRADPPWAADYPDVTPPRGLHVHQTGRLPEVVTKYGGWGDRQV HHHHCCCCCEEECCHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHCCCCCCEE LICGGPRMVAATKAALIAKGAAAQRIQHDPLSR EEECCCCEEHHHHHHHHHCCHHHHHHCCCCCCC >Mature Secondary Structure SLEDAEALRVLRDAFAPCDAGRPGDSGDLVHRFYTHWFALDPSVRDLFPPEMGAQRVAF CCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHEECCCHHHCCCCCCCCHHHHH GHALHWVYGELVARRAQEPVAFLAQLGRDHRKYGVLPRHYQTLSRALLATLRSHLDAAWT HHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH DAVEDAARTSLNLITGVMSGAADADEGPAWWDGTVIEHLRVSRDLAVVRLRLDQPMPYHP HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCEEEEEEEECCCCCCCC GQYVNVQVPQCPRRWRYLSPAIPADPGCGIEFHVRLVPGGLVSTAIVNETRPGDRWRLSS CCEEEEECCCCCCHHCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHCCCCCCCCEEECC PHGGLRVDRDGGDVLMVAGSTGLAPLRALIMDLSRFAVNPRVHLFFGARYRCELYDLPTL CCCCEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEEECCCHH WQIASHNPWLSVSPVSEYRADPPWAADYPDVTPPRGLHVHQTGRLPEVVTKYGGWGDRQV HHHHCCCCCEEECCHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHCCCCCCEE LICGGPRMVAATKAALIAKGAAAQRIQHDPLSR EEECCCCEEHHHHHHHHHCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2254258; 2254259 [H]