Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is yihR [C]

Identifier: 41409948

GI number: 41409948

Start: 4311408

End: 4312310

Strand: Reverse

Name: yihR [C]

Synonym: MAP3850c

Alternate gene names: 41409948

Gene position: 4312310-4311408 (Counterclockwise)

Preceding gene: 41409949

Following gene: 41409937

Centisome position: 89.29

GC content: 72.2

Gene sequence:

>903_bases
ATGGATGTCGTCGCGCTGCGCGATCCCGTGTCGTCGGTCGTCGCCCGCTTCGTCCCGCGGGCGGGCATGATCGGCACGTC
GCTGCGCGACGGCGAGGTGGAGCTGCTGGGCCAGCGCCGCGGCCTGGACGCCTACGTCGCCGACGGCAAGACGATGGGCA
TCCCGATTCTGTATCCGTGGGCGAACCGGTTGGGCGGCAACACTTATGCCGCCGAGGGCGCGGCGGTGACCCTGACGCCC
GGACGCAACGGCGTGCGCGCCGACCCCAACGGGTTGCCGCTGCACGGCGTGCTGGCCGGCTATCCCGGCTGGCGGGTGAC
GGCGCAGACGGCGAACGAGCTGACCGCCCAGCTCGATTTCGGCGCCGATCCAAAGCTGTTGGCCGGCTTCCCGTTTCCGC
ATCTGCTGCAGGTGGCGGTGCGCCTGGCCGGGCGCACGCTGACGCTGACCACCACGGTCACCGCGACCGGTGACACCGCG
GTGCCGGTGTGCTTCGGCTTTCACCCCTACCTGCAGCTGCCTGGCGTGCCGCGCGCCGAGTGGGTCATCGAGACCCCGCC
GCTGCGGCATCTGGGGTTGGACGACCACGGGCTGCCCACCGGGGAGTCCGAACTACAGCCGGCACGGCGAGAACCGCTGC
GGGACAAGACGTTCGATGATGCCTACGACCGGGTCGACGAGGGCGCGGTGTTCGCGGTGTCCGGCGGCGGGCGCCGGCTC
GAGGTATGCTTCGAGCACGGCTATCCCGCCGCGCAGATCTTCACGCCGCCGGCCAAACCCGGCGAGGAGGCGGTCATCTG
CTTCGAGCCGATGACCGCGCCGACCGACGCCCTGCGCCGCGGCGGCTACCGCCGCGCACACCCCGGCCGGCGGGCGGCTA
CCCGGTTCTCGATCCGGGTGTGA

Upstream 100 bases:

>100_bases
GGCGGGCCCAGGATGGTCGCCGCCACCAAGGCCGCGCTGATCGCCAAAGGCGCTGCAGCCCAACGTATTCAGCATGACCC
CTTGTCGAGGTGAGCTAGCC

Downstream 100 bases:

>100_bases
TCGCCCCGGCCGATGGGGCGCGCGCGGCGCGACTGGAGAACAGCGAGCGCGGCGCGACCCGTGCCGACACGTCGGGCCCG
ACCCGGTTCATGGCGCCCAG

Product: hypothetical protein

Products: NA

Alternate protein names: Aldose 1-Epimerase Subfamily Protein

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MDVVALRDPVSSVVARFVPRAGMIGTSLRDGEVELLGQRRGLDAYVADGKTMGIPILYPWANRLGGNTYAAEGAAVTLTP
GRNGVRADPNGLPLHGVLAGYPGWRVTAQTANELTAQLDFGADPKLLAGFPFPHLLQVAVRLAGRTLTLTTTVTATGDTA
VPVCFGFHPYLQLPGVPRAEWVIETPPLRHLGLDDHGLPTGESELQPARREPLRDKTFDDAYDRVDEGAVFAVSGGGRRL
EVCFEHGYPAAQIFTPPAKPGEEAVICFEPMTAPTDALRRGGYRRAHPGRRAATRFSIRV

Sequences:

>Translated_300_residues
MDVVALRDPVSSVVARFVPRAGMIGTSLRDGEVELLGQRRGLDAYVADGKTMGIPILYPWANRLGGNTYAAEGAAVTLTP
GRNGVRADPNGLPLHGVLAGYPGWRVTAQTANELTAQLDFGADPKLLAGFPFPHLLQVAVRLAGRTLTLTTTVTATGDTA
VPVCFGFHPYLQLPGVPRAEWVIETPPLRHLGLDDHGLPTGESELQPARREPLRDKTFDDAYDRVDEGAVFAVSGGGRRL
EVCFEHGYPAAQIFTPPAKPGEEAVICFEPMTAPTDALRRGGYRRAHPGRRAATRFSIRV
>Mature_300_residues
MDVVALRDPVSSVVARFVPRAGMIGTSLRDGEVELLGQRRGLDAYVADGKTMGIPILYPWANRLGGNTYAAEGAAVTLTP
GRNGVRADPNGLPLHGVLAGYPGWRVTAQTANELTAQLDFGADPKLLAGFPFPHLLQVAVRLAGRTLTLTTTVTATGDTA
VPVCFGFHPYLQLPGVPRAEWVIETPPLRHLGLDDHGLPTGESELQPARREPLRDKTFDDAYDRVDEGAVFAVSGGGRRL
EVCFEHGYPAAQIFTPPAKPGEEAVICFEPMTAPTDALRRGGYRRAHPGRRAATRFSIRV

Specific function: Unknown

COG id: COG2017

COG function: function code G; Galactose mutarotase and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32252; Mature: 32252

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVVALRDPVSSVVARFVPRAGMIGTSLRDGEVELLGQRRGLDAYVADGKTMGIPILYPW
CCEEECCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCEEEECC
ANRLGGNTYAAEGAAVTLTPGRNGVRADPNGLPLHGVLAGYPGWRVTAQTANELTAQLDF
HHHCCCCEEECCCEEEEECCCCCCCCCCCCCCCEEHHEECCCCCEEEECCCCCEEEEECC
GADPKLLAGFPFPHLLQVAVRLAGRTLTLTTTVTATGDTAVPVCFGFHPYLQLPGVPRAE
CCCCCEEECCCCHHHHHHHHHHCCCEEEEEEEEEECCCCCEEEEECCCCCEECCCCCCCC
WVIETPPLRHLGLDDHGLPTGESELQPARREPLRDKTFDDAYDRVDEGAVFAVSGGGRRL
EEEECCCCCCCCCCCCCCCCCHHHCCCHHHCCCCCCCCHHHHHHHCCCEEEEEECCCCEE
EVCFEHGYPAAQIFTPPAKPGEEAVICFEPMTAPTDALRRGGYRRAHPGRRAATRFSIRV
EEEEECCCCEEEEECCCCCCCCCEEEEECCCCCCHHHHHHCCCCCCCCCCCCCEEEEEEC
>Mature Secondary Structure
MDVVALRDPVSSVVARFVPRAGMIGTSLRDGEVELLGQRRGLDAYVADGKTMGIPILYPW
CCEEECCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCEEEECC
ANRLGGNTYAAEGAAVTLTPGRNGVRADPNGLPLHGVLAGYPGWRVTAQTANELTAQLDF
HHHCCCCEEECCCEEEEECCCCCCCCCCCCCCCEEHHEECCCCCEEEECCCCCEEEEECC
GADPKLLAGFPFPHLLQVAVRLAGRTLTLTTTVTATGDTAVPVCFGFHPYLQLPGVPRAE
CCCCCEEECCCCHHHHHHHHHHCCCEEEEEEEEEECCCCCEEEEECCCCCEECCCCCCCC
WVIETPPLRHLGLDDHGLPTGESELQPARREPLRDKTFDDAYDRVDEGAVFAVSGGGRRL
EEEECCCCCCCCCCCCCCCCCHHHCCCHHHCCCCCCCCHHHHHHHCCCEEEEEECCCCEE
EVCFEHGYPAAQIFTPPAKPGEEAVICFEPMTAPTDALRRGGYRRAHPGRRAATRFSIRV
EEEEECCCCEEEEECCCCCCCCCEEEEECCCCCCHHHHHHCCCCCCCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA