| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is yihR [C]
Identifier: 41409948
GI number: 41409948
Start: 4311408
End: 4312310
Strand: Reverse
Name: yihR [C]
Synonym: MAP3850c
Alternate gene names: 41409948
Gene position: 4312310-4311408 (Counterclockwise)
Preceding gene: 41409949
Following gene: 41409937
Centisome position: 89.29
GC content: 72.2
Gene sequence:
>903_bases ATGGATGTCGTCGCGCTGCGCGATCCCGTGTCGTCGGTCGTCGCCCGCTTCGTCCCGCGGGCGGGCATGATCGGCACGTC GCTGCGCGACGGCGAGGTGGAGCTGCTGGGCCAGCGCCGCGGCCTGGACGCCTACGTCGCCGACGGCAAGACGATGGGCA TCCCGATTCTGTATCCGTGGGCGAACCGGTTGGGCGGCAACACTTATGCCGCCGAGGGCGCGGCGGTGACCCTGACGCCC GGACGCAACGGCGTGCGCGCCGACCCCAACGGGTTGCCGCTGCACGGCGTGCTGGCCGGCTATCCCGGCTGGCGGGTGAC GGCGCAGACGGCGAACGAGCTGACCGCCCAGCTCGATTTCGGCGCCGATCCAAAGCTGTTGGCCGGCTTCCCGTTTCCGC ATCTGCTGCAGGTGGCGGTGCGCCTGGCCGGGCGCACGCTGACGCTGACCACCACGGTCACCGCGACCGGTGACACCGCG GTGCCGGTGTGCTTCGGCTTTCACCCCTACCTGCAGCTGCCTGGCGTGCCGCGCGCCGAGTGGGTCATCGAGACCCCGCC GCTGCGGCATCTGGGGTTGGACGACCACGGGCTGCCCACCGGGGAGTCCGAACTACAGCCGGCACGGCGAGAACCGCTGC GGGACAAGACGTTCGATGATGCCTACGACCGGGTCGACGAGGGCGCGGTGTTCGCGGTGTCCGGCGGCGGGCGCCGGCTC GAGGTATGCTTCGAGCACGGCTATCCCGCCGCGCAGATCTTCACGCCGCCGGCCAAACCCGGCGAGGAGGCGGTCATCTG CTTCGAGCCGATGACCGCGCCGACCGACGCCCTGCGCCGCGGCGGCTACCGCCGCGCACACCCCGGCCGGCGGGCGGCTA CCCGGTTCTCGATCCGGGTGTGA
Upstream 100 bases:
>100_bases GGCGGGCCCAGGATGGTCGCCGCCACCAAGGCCGCGCTGATCGCCAAAGGCGCTGCAGCCCAACGTATTCAGCATGACCC CTTGTCGAGGTGAGCTAGCC
Downstream 100 bases:
>100_bases TCGCCCCGGCCGATGGGGCGCGCGCGGCGCGACTGGAGAACAGCGAGCGCGGCGCGACCCGTGCCGACACGTCGGGCCCG ACCCGGTTCATGGCGCCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: Aldose 1-Epimerase Subfamily Protein
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MDVVALRDPVSSVVARFVPRAGMIGTSLRDGEVELLGQRRGLDAYVADGKTMGIPILYPWANRLGGNTYAAEGAAVTLTP GRNGVRADPNGLPLHGVLAGYPGWRVTAQTANELTAQLDFGADPKLLAGFPFPHLLQVAVRLAGRTLTLTTTVTATGDTA VPVCFGFHPYLQLPGVPRAEWVIETPPLRHLGLDDHGLPTGESELQPARREPLRDKTFDDAYDRVDEGAVFAVSGGGRRL EVCFEHGYPAAQIFTPPAKPGEEAVICFEPMTAPTDALRRGGYRRAHPGRRAATRFSIRV
Sequences:
>Translated_300_residues MDVVALRDPVSSVVARFVPRAGMIGTSLRDGEVELLGQRRGLDAYVADGKTMGIPILYPWANRLGGNTYAAEGAAVTLTP GRNGVRADPNGLPLHGVLAGYPGWRVTAQTANELTAQLDFGADPKLLAGFPFPHLLQVAVRLAGRTLTLTTTVTATGDTA VPVCFGFHPYLQLPGVPRAEWVIETPPLRHLGLDDHGLPTGESELQPARREPLRDKTFDDAYDRVDEGAVFAVSGGGRRL EVCFEHGYPAAQIFTPPAKPGEEAVICFEPMTAPTDALRRGGYRRAHPGRRAATRFSIRV >Mature_300_residues MDVVALRDPVSSVVARFVPRAGMIGTSLRDGEVELLGQRRGLDAYVADGKTMGIPILYPWANRLGGNTYAAEGAAVTLTP GRNGVRADPNGLPLHGVLAGYPGWRVTAQTANELTAQLDFGADPKLLAGFPFPHLLQVAVRLAGRTLTLTTTVTATGDTA VPVCFGFHPYLQLPGVPRAEWVIETPPLRHLGLDDHGLPTGESELQPARREPLRDKTFDDAYDRVDEGAVFAVSGGGRRL EVCFEHGYPAAQIFTPPAKPGEEAVICFEPMTAPTDALRRGGYRRAHPGRRAATRFSIRV
Specific function: Unknown
COG id: COG2017
COG function: function code G; Galactose mutarotase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32252; Mature: 32252
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVVALRDPVSSVVARFVPRAGMIGTSLRDGEVELLGQRRGLDAYVADGKTMGIPILYPW CCEEECCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCEEEECC ANRLGGNTYAAEGAAVTLTPGRNGVRADPNGLPLHGVLAGYPGWRVTAQTANELTAQLDF HHHCCCCEEECCCEEEEECCCCCCCCCCCCCCCEEHHEECCCCCEEEECCCCCEEEEECC GADPKLLAGFPFPHLLQVAVRLAGRTLTLTTTVTATGDTAVPVCFGFHPYLQLPGVPRAE CCCCCEEECCCCHHHHHHHHHHCCCEEEEEEEEEECCCCCEEEEECCCCCEECCCCCCCC WVIETPPLRHLGLDDHGLPTGESELQPARREPLRDKTFDDAYDRVDEGAVFAVSGGGRRL EEEECCCCCCCCCCCCCCCCCHHHCCCHHHCCCCCCCCHHHHHHHCCCEEEEEECCCCEE EVCFEHGYPAAQIFTPPAKPGEEAVICFEPMTAPTDALRRGGYRRAHPGRRAATRFSIRV EEEEECCCCEEEEECCCCCCCCCEEEEECCCCCCHHHHHHCCCCCCCCCCCCCEEEEEEC >Mature Secondary Structure MDVVALRDPVSSVVARFVPRAGMIGTSLRDGEVELLGQRRGLDAYVADGKTMGIPILYPW CCEEECCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCEEEECC ANRLGGNTYAAEGAAVTLTPGRNGVRADPNGLPLHGVLAGYPGWRVTAQTANELTAQLDF HHHCCCCEEECCCEEEEECCCCCCCCCCCCCCCEEHHEECCCCCEEEECCCCCEEEEECC GADPKLLAGFPFPHLLQVAVRLAGRTLTLTTTVTATGDTAVPVCFGFHPYLQLPGVPRAE CCCCCEEECCCCHHHHHHHHHHCCCEEEEEEEEEECCCCCEEEEECCCCCEECCCCCCCC WVIETPPLRHLGLDDHGLPTGESELQPARREPLRDKTFDDAYDRVDEGAVFAVSGGGRRL EEEECCCCCCCCCCCCCCCCCHHHCCCHHHCCCCCCCCHHHHHHHCCCEEEEEECCCCEE EVCFEHGYPAAQIFTPPAKPGEEAVICFEPMTAPTDALRRGGYRRAHPGRRAATRFSIRV EEEEECCCCEEEEECCCCCCCCCEEEEECCCCCCHHHHHHCCCCCCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA