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The map label for this gene is 41409856

Identifier: 41409856

GI number: 41409856

Start: 4196147

End: 4196905

Strand: Reverse

Name: 41409856

Synonym: MAP3758c

Alternate gene names: NA

Gene position: 4196905-4196147 (Counterclockwise)

Preceding gene: 41409857

Following gene: 41409855

Centisome position: 86.9

GC content: 64.03

Gene sequence:

>759_bases
GTGAGCGTGATGGTCGGGTATTTGGAGTGTCGACCTTTGGGTGCGCTCGCGCCGTATGTGGACTGTGGCTGGGTGCGCTC
GAATACCGCGGGTGGGGCGCTGCGGGTGATGCCGGACGGTTGCGTCGATCTGTTCGTCACCGCCGAGGGCGCAGTCATGG
TTTCTGGTCCGGCCACAACCTTTTACGACCAATGTGCGGGCACCGAAGGTGCGATGATCGGTCTGCGGTTACGACCGGGT
GCTGCCGCCGCGGTGCTGGGCCATCCTGTCAGCGAGTTAAGAGATACCCAGATCCGGGTTGACTCGGTGTTCGGGACATC
CGCGTCCGGATTGGCTGAGGATGTGCTGGAGGCCAACGCTTTTCGGCAACGGGTCGCATTATTGGCGGCGGTGCTGGCGC
GGTATGTGGTCAAGATCGATCCCGTGGTCGATCAGCCAGTGGCGCACTCAATCGAGATGCTGCGTGTCCACCCGGCCCGC
TCTGTTTCGGATGTCGCCTCCTCTGTTGGGTTGAGCGAGCGGCAGCTTCGCCGTCGGTTCGACGCCGCGGTCGGCTTCGG
CCCCAAGCGGCTTGGCCGGATTTTCCGGTTCCAGCGGCTGCTGGATTTGATCCATGCCGGTGATCACCGAATCCGGTGGG
CCGATCTAGCGATCGAGGCGGGTTACGCCGATCAGTCCCACCTGATCAGCGAATGCCTGGCACTGGCTGGAGCGGCTCCC
ACAGAACTTCCCGGTGCGGCTCGCCCACGGCACGCGTGA

Upstream 100 bases:

>100_bases
ACGGTTCACGAGTATTGCCGCCTGGGAGTCTGCGCTGACCGGGCGGCTTCGAAGGATTGCGGCCCAATTTGTTGCGGAGC
GACGTAGGACCTGGCTGAAT

Downstream 100 bases:

>100_bases
GATGTCCGTTTTCTCCAATATCTGCAGCCGCGAGCGGTCATAACTTGGCCGTGTGAAGCGACACACGCGACCGGTGACCG
AGCTATGGCCGCTATGGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MSVMVGYLECRPLGALAPYVDCGWVRSNTAGGALRVMPDGCVDLFVTAEGAVMVSGPATTFYDQCAGTEGAMIGLRLRPG
AAAAVLGHPVSELRDTQIRVDSVFGTSASGLAEDVLEANAFRQRVALLAAVLARYVVKIDPVVDQPVAHSIEMLRVHPAR
SVSDVASSVGLSERQLRRRFDAAVGFGPKRLGRIFRFQRLLDLIHAGDHRIRWADLAIEAGYADQSHLISECLALAGAAP
TELPGAARPRHA

Sequences:

>Translated_252_residues
MSVMVGYLECRPLGALAPYVDCGWVRSNTAGGALRVMPDGCVDLFVTAEGAVMVSGPATTFYDQCAGTEGAMIGLRLRPG
AAAAVLGHPVSELRDTQIRVDSVFGTSASGLAEDVLEANAFRQRVALLAAVLARYVVKIDPVVDQPVAHSIEMLRVHPAR
SVSDVASSVGLSERQLRRRFDAAVGFGPKRLGRIFRFQRLLDLIHAGDHRIRWADLAIEAGYADQSHLISECLALAGAAP
TELPGAARPRHA
>Mature_251_residues
SVMVGYLECRPLGALAPYVDCGWVRSNTAGGALRVMPDGCVDLFVTAEGAVMVSGPATTFYDQCAGTEGAMIGLRLRPGA
AAAVLGHPVSELRDTQIRVDSVFGTSASGLAEDVLEANAFRQRVALLAAVLARYVVKIDPVVDQPVAHSIEMLRVHPARS
VSDVASSVGLSERQLRRRFDAAVGFGPKRLGRIFRFQRLLDLIHAGDHRIRWADLAIEAGYADQSHLISECLALAGAAPT
ELPGAARPRHA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018062
- InterPro:   IPR018060 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26852; Mature: 26721

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVMVGYLECRPLGALAPYVDCGWVRSNTAGGALRVMPDGCVDLFVTAEGAVMVSGPATT
CCEEEEEEECCCCCCCCCCCCCCCEECCCCCCEEEECCCCCEEEEEECCCEEEECCCCHH
FYDQCAGTEGAMIGLRLRPGAAAAVLGHPVSELRDTQIRVDSVFGTSASGLAEDVLEANA
HHHHHCCCCCCEEEEEECCCCHHHHHCCCHHHHHHCCEEEEHCCCCCHHHHHHHHHHHHH
FRQRVALLAAVLARYVVKIDPVVDQPVAHSIEMLRVHPARSVSDVASSVGLSERQLRRRF
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEECCCCHHHHHHHHCCCCHHHHHHHH
DAAVGFGPKRLGRIFRFQRLLDLIHAGDHRIRWADLAIEAGYADQSHLISECLALAGAAP
HHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCHHHHHHHHHHHCCCCC
TELPGAARPRHA
CCCCCCCCCCCC
>Mature Secondary Structure 
SVMVGYLECRPLGALAPYVDCGWVRSNTAGGALRVMPDGCVDLFVTAEGAVMVSGPATT
CEEEEEEECCCCCCCCCCCCCCCEECCCCCCEEEECCCCCEEEEEECCCEEEECCCCHH
FYDQCAGTEGAMIGLRLRPGAAAAVLGHPVSELRDTQIRVDSVFGTSASGLAEDVLEANA
HHHHHCCCCCCEEEEEECCCCHHHHHCCCHHHHHHCCEEEEHCCCCCHHHHHHHHHHHHH
FRQRVALLAAVLARYVVKIDPVVDQPVAHSIEMLRVHPARSVSDVASSVGLSERQLRRRF
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEECCCCHHHHHHHHCCCCHHHHHHHH
DAAVGFGPKRLGRIFRFQRLLDLIHAGDHRIRWADLAIEAGYADQSHLISECLALAGAAP
HHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCHHHHHHHHHHHCCCCC
TELPGAARPRHA
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7517396 [H]