| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409857
Identifier: 41409857
GI number: 41409857
Start: 4197143
End: 4198378
Strand: Reverse
Name: 41409857
Synonym: MAP3759c
Alternate gene names: NA
Gene position: 4198378-4197143 (Counterclockwise)
Preceding gene: 41409858
Following gene: 41409856
Centisome position: 86.93
GC content: 64.0
Gene sequence:
>1236_bases ATGGCCCTGGACCAGTCTGCCTTGCTGGAGGTGCTGGACGCATTACGCAATGCCGATGCCGCTGATCGGATCAAGCAGGC CGCCGAGACGATTTATCAGGCACTCATCGATGCGGAGCTGACGGCGGTGATCGGCGCCGGTCCGCATGAACGGAGCGCAT CACGAACCAACCAGCGCAACGGGTCTCGGCCGCGCACACTGTCGACGATCGCTGGCGATTTGGAGTTGCGGATTCCCAAG CTTCGGTCGGGCTCGTTCTTCCCGGCGCTGCTGGAGCGGCGCCGCCGGGTCGATCAGTGCTTGTTCGCGGTGGTGATGGA GGCCTATTTGCACGGCACCTCCACCCGCAAAGTCGACGATTTGGTCAAAGCCCTCGGCGCGGACGCCGGCATCTCCAAAA GCGAGGTCTCCCGGATTTGCGCCGATCTGGACACCGAGGTAGGCGCCTTTCGGGACCGGCCTCTATCCGAACAGCACTTC CCGTATGTGTTCCTCGACGCCACTTACTGCAAGGCTCGGGTCAACCATCGGGTGGTCTCCCAAGCGGTCGTCATCGCCAC CGGTGTCGCGGCTGACGGACGCCGTGAAGTGCTCGGCTTCGACGTCGGTGACTCCGAGGACGGCGCGTTTTGGACGGCGT TTCTGCGCTCACTGAAAACCCGCGGCCTGTCCGGGGTGCAGCTGGTGATCTCTGATGCCCACACCGGGTTGCGCAGCGCC ATCGAGGCCATCCTCATCGGCGCATCTTGGCAACGATGCCGGGTGCACTTCCTGCGCAACGTGCTCGCCCAGGTGCCCAA GGGATCAGCCGAGATGGTCGCCGCAGCGATCCGCACCATCTTCGCCCAACCCGACGCCGAACATGTGCGAGAGCAACTCG ACACCATCGCCGGCATGCTCGGCCGCCAACTGCCCAAGGTCGAAACGATGCTGCGCGAGGCCGCCGACGACATCACCGCA TTCGCCGATTTCCCTGTCCTGCACTGGAAAAAGATCTGGAGCACCAACCCCCTCGAACGACTCAACAAGGAGATCAAACG CCGCACCGACGTCGTCGGCGTCTTCCCCAACCCCGCCGCGCTGCTACGGCTGGCCGGCTCCGTTCTCGTCGAAGCCCACG ACGAATGGCAAGTCGCCGAAAAGCGCTATCTCTCCGAGACCACCCTGGCCCTATTACATCCCCGCTCCGATTCAGCCGAC CAATCCGTTGCCGTCCCCGCCGCCATCACGGCATAG
Upstream 100 bases:
>100_bases TGGTGTAAATAGTGGCGGCGTGTCGGTACTGATGTAGAGGGCCATCGCGTGAGTCTCTGTGGTGAAACGACCAAGGATCA CTACCGAGAGGAACATCGCG
Downstream 100 bases:
>100_bases TGGAAACTCGCAGAGCCTCAGGCGAAACGCCGATCGGCTTTACACCACTTCACGGGGCACAACCTCCCTGTCACGCTTTC TCGCCGAAGTGGCGCGGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 411; Mature: 410
Protein sequence:
>411_residues MALDQSALLEVLDALRNADAADRIKQAAETIYQALIDAELTAVIGAGPHERSASRTNQRNGSRPRTLSTIAGDLELRIPK LRSGSFFPALLERRRRVDQCLFAVVMEAYLHGTSTRKVDDLVKALGADAGISKSEVSRICADLDTEVGAFRDRPLSEQHF PYVFLDATYCKARVNHRVVSQAVVIATGVAADGRREVLGFDVGDSEDGAFWTAFLRSLKTRGLSGVQLVISDAHTGLRSA IEAILIGASWQRCRVHFLRNVLAQVPKGSAEMVAAAIRTIFAQPDAEHVREQLDTIAGMLGRQLPKVETMLREAADDITA FADFPVLHWKKIWSTNPLERLNKEIKRRTDVVGVFPNPAALLRLAGSVLVEAHDEWQVAEKRYLSETTLALLHPRSDSAD QSVAVPAAITA
Sequences:
>Translated_411_residues MALDQSALLEVLDALRNADAADRIKQAAETIYQALIDAELTAVIGAGPHERSASRTNQRNGSRPRTLSTIAGDLELRIPK LRSGSFFPALLERRRRVDQCLFAVVMEAYLHGTSTRKVDDLVKALGADAGISKSEVSRICADLDTEVGAFRDRPLSEQHF PYVFLDATYCKARVNHRVVSQAVVIATGVAADGRREVLGFDVGDSEDGAFWTAFLRSLKTRGLSGVQLVISDAHTGLRSA IEAILIGASWQRCRVHFLRNVLAQVPKGSAEMVAAAIRTIFAQPDAEHVREQLDTIAGMLGRQLPKVETMLREAADDITA FADFPVLHWKKIWSTNPLERLNKEIKRRTDVVGVFPNPAALLRLAGSVLVEAHDEWQVAEKRYLSETTLALLHPRSDSAD QSVAVPAAITA >Mature_410_residues ALDQSALLEVLDALRNADAADRIKQAAETIYQALIDAELTAVIGAGPHERSASRTNQRNGSRPRTLSTIAGDLELRIPKL RSGSFFPALLERRRRVDQCLFAVVMEAYLHGTSTRKVDDLVKALGADAGISKSEVSRICADLDTEVGAFRDRPLSEQHFP YVFLDATYCKARVNHRVVSQAVVIATGVAADGRREVLGFDVGDSEDGAFWTAFLRSLKTRGLSGVQLVISDAHTGLRSAI EAILIGASWQRCRVHFLRNVLAQVPKGSAEMVAAAIRTIFAQPDAEHVREQLDTIAGMLGRQLPKVETMLREAADDITAF ADFPVLHWKKIWSTNPLERLNKEIKRRTDVVGVFPNPAALLRLAGSVLVEAHDEWQVAEKRYLSETTLALLHPRSDSADQ SVAVPAAITA
Specific function: Required for the transposition of the insertion element [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase mutator family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001207 [H]
Pfam domain/function: PF00872 Transposase_mut [H]
EC number: NA
Molecular weight: Translated: 45016; Mature: 44885
Theoretical pI: Translated: 7.33; Mature: 7.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALDQSALLEVLDALRNADAADRIKQAAETIYQALIDAELTAVIGAGPHERSASRTNQRN CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCC GSRPRTLSTIAGDLELRIPKLRSGSFFPALLERRRRVDQCLFAVVMEAYLHGTSTRKVDD CCCCCCHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH LVKALGADAGISKSEVSRICADLDTEVGAFRDRPLSEQHFPYVFLDATYCKARVNHRVVS HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHH QAVVIATGVAADGRREVLGFDVGDSEDGAFWTAFLRSLKTRGLSGVQLVISDAHTGLRSA HHHHHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHH IEAILIGASWQRCRVHFLRNVLAQVPKGSAEMVAAAIRTIFAQPDAEHVREQLDTIAGML HHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH GRQLPKVETMLREAADDITAFADFPVLHWKKIWSTNPLERLNKEIKRRTDVVGVFPNPAA HCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHCEEEECCCHHH LLRLAGSVLVEAHDEWQVAEKRYLSETTLALLHPRSDSADQSVAVPAAITA HHHHHHHHHEECCHHHHHHHHHHHHHHHHHEEECCCCCCCCCEECCCCCCC >Mature Secondary Structure ALDQSALLEVLDALRNADAADRIKQAAETIYQALIDAELTAVIGAGPHERSASRTNQRN CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCC GSRPRTLSTIAGDLELRIPKLRSGSFFPALLERRRRVDQCLFAVVMEAYLHGTSTRKVDD CCCCCCHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH LVKALGADAGISKSEVSRICADLDTEVGAFRDRPLSEQHFPYVFLDATYCKARVNHRVVS HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHH QAVVIATGVAADGRREVLGFDVGDSEDGAFWTAFLRSLKTRGLSGVQLVISDAHTGLRSA HHHHHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHH IEAILIGASWQRCRVHFLRNVLAQVPKGSAEMVAAAIRTIFAQPDAEHVREQLDTIAGML HHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH GRQLPKVETMLREAADDITAFADFPVLHWKKIWSTNPLERLNKEIKRRTDVVGVFPNPAA HCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHCEEEECCCHHH LLRLAGSVLVEAHDEWQVAEKRYLSETTLALLHPRSDSADQSVAVPAAITA HHHHHHHHHEECCHHHHHHHHHHHHHHHHHEEECCCCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1663885; 12788972 [H]