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The map label for this gene is fadE6

Identifier: 41409814

GI number: 41409814

Start: 4134577

End: 4136778

Strand: Reverse

Name: fadE6

Synonym: MAP3716c

Alternate gene names: 41409814

Gene position: 4136778-4134577 (Counterclockwise)

Preceding gene: 41409815

Following gene: 41409811

Centisome position: 85.65

GC content: 69.48

Gene sequence:

>2202_bases
ATGCCGATCGCGATAAATCCCGAGCATCAAGAACTGGCCGATTCCGTGCGAGCGCTGGTGGCGCGCATCGCCCCGTCCGA
GACGCTGCACGAGGCGATGGAGACGGAGGTCGGCAACCCGCCGCCGTACTGGCAGGCCGCGGCCGAGCAGGGCCTGCAGG
GCGTTCATCTGGCGGAATCCGTCGGCGGGCAGGGCTTCGGCGTTCTCGAGTTGGCCATTGTGCTCGCGGAATTCGGCTAC
GGGGCGGTGCCGGGCCCCTTCGTGCCGTCCGCGATCGCCAGCGCGTTGATCTCCGCGCACGACCCGGACGCCAAGGCGCT
CGCCGGGCTGGCATCCGGCGCCGAGATCGCCGCCTACGGCCTGAATTGCTGCGCGCTGACCGCCACCCGGCAGGGCAGTT
CTCTGGTGATCCGCGGCGAGCTCCGCGCGGTCCCCGCCGCCGCGCAGGCGTCGCTGCTGGTGCTGCCCGTCGCGATCGAC
AGCGGCGAGGCGTGGGTGGTGCTGCGCGCCGACCAGCTCGAGATCGAGCCGGTGAAAAGCCTGGACCCGTTGCGGCCCAT
CGCCGACGTGCGGGCCAACGCCGTGGAGGTCGGCGACGACGTCGTCTTGACGAACCTGAGCATGGGCACCGCGCACGCGC
TGATGACGACCCTGCTGTCCGCCGAAGCCATCGGCGTGGCGCGCTGGGCGACCGACACCGCGTCGAGCTACGCCAAGATC
CGCGAGCAGTTCGGCAGGCCGATCGGCCAATTCCAGGCCATCAAGCACAAGTGCGCCGAGATGATCGCCGACACCGAGCG
GGCCACCGCTGCGGTGTGGGACGCCGCCCGCGCGATCGACGAGGCCCGCGAAAACCGTTGGGACACCGCGGGTTCCCACG
TCGAGTTCGCCGCCGCCGTGGCGGCGACGCTGGCGCCGGCGGCCGCTCAACGGTGCGCGCAGGATTGCATCCAGGTGCAC
GGCGGGATCGGCTTCACGTGGGAGCACGACACGAACGTGTACTACCGCCGGGCGCTGATGTTGGCCGCCTCCTTCGGCCG
CAGCTCGGACTACCCGCAAAAGGTGGTCGACACCGCGACCACCACCGGGATGCGCGCGGTCGACATCGACCTCGATCCCG
AGACCGAGAAGCTGCGGGCGGAGATCCGGGCCGAAGTGGCGGCGCTCAAGGAGATCGAGCGCGAGCAACGCAAGGTCGCC
ATCGCCGAGGGCGGCTGGGTGCTGCCGTACCTGCCCAAGCCGTGGGGCCGGGCGGCCGGGCCGGTGGAACAGATCATCAT
CGCGCAGGAGTTCGCCTCCGGGCGGGTCAAGCGGCCCCAGACCGGCATCGCCACCTGGATCGTCCCGTCGATCGTGGCGT
TCGGCACCGAGGAGCAAAAGCAGCGGTTCCTGCCGCCGACCTTCCGCGGCGAGATGATCTGGTGTCAGCTGTTTTCCGAG
CCCGGCGCGGGTTCGGATCTGGCCGGCCTGTCCACGAAGGCCACCCGGACCGACGGAGGGTGGCGCATCACCGGCCAGAA
GATCTGGACGACCGCCGCGCAGTTCTCGCAGTGGGGTGCGCTGCTCGCACGGACCGACCCCAGCGCGCCGAAACACAGCG
GCATCACGTACTTCCTGCTGGACATGAAGAGCGAGGGCGTCGACGTCAAGCCGCTGCGCGAGCTCACCGGCAACGCGATG
TTCAACACCGTCTACATCGACGACGTGTTCGTGCCCGACGAGTGCGTGCTCGGTGAGGTGAACCGGGGCTGGGAGGTCAG
CCGCAACACGCTGACCGCGGAGCGGGTGTCGATCGGCAGCAGCGAGGCGAACTTCCTGGCCACGCTGTCGCAGTTCGTCG
AGTTCGTTCGTGACGGGCAGTTCGATCAGGTCGCGCAGCACCGCGCCGGTCAGCTGATTGCCGAGGGCCATGCGGCCAAG
GTGCTGAACCTGCGTTCCACGCTGCTGACGCTGGCGGGCGGGGACGCGATGCCGTCGGCGGCGATCTCCAAGTTGTTGTC
GATGCGCACCGGCCAGGGTTACGCCGAATTCGCGGTCTCGTCCTTCGGGACCGACGCCGCGATCGGCGACACCGACCAAC
TGCCCGGCAAATGGGGCGAGTACCTGCTGGCCAGCCGGGCGACCACCATCTACGGCGGGACGTCCGAGGTGCAGCTGAAC
ATCATCGCCGAACGGTTGTTGGGCCTGCCGCGCGATCCCTAA

Upstream 100 bases:

>100_bases
GCAAGCGGTGGCGGTAGGTGATGTCGTCAACCAACCGACTGGTTGTTAGCTTGGAAGGTACTTGGCCGAGACGGCGTCCT
GCAGCAACGGAAGGCGACCA

Downstream 100 bases:

>100_bases
CCGGGCGCAGAAATGGGCCATGCCGGCCTGACTGAGTCAAGCCGGCATGGTTCCCCCCATACACGGGCCGTCCATCCCGA
GGGTTGGCGTGTCGGTGATG

Product: FadE6

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 733; Mature: 732

Protein sequence:

>733_residues
MPIAINPEHQELADSVRALVARIAPSETLHEAMETEVGNPPPYWQAAAEQGLQGVHLAESVGGQGFGVLELAIVLAEFGY
GAVPGPFVPSAIASALISAHDPDAKALAGLASGAEIAAYGLNCCALTATRQGSSLVIRGELRAVPAAAQASLLVLPVAID
SGEAWVVLRADQLEIEPVKSLDPLRPIADVRANAVEVGDDVVLTNLSMGTAHALMTTLLSAEAIGVARWATDTASSYAKI
REQFGRPIGQFQAIKHKCAEMIADTERATAAVWDAARAIDEARENRWDTAGSHVEFAAAVAATLAPAAAQRCAQDCIQVH
GGIGFTWEHDTNVYYRRALMLAASFGRSSDYPQKVVDTATTTGMRAVDIDLDPETEKLRAEIRAEVAALKEIEREQRKVA
IAEGGWVLPYLPKPWGRAAGPVEQIIIAQEFASGRVKRPQTGIATWIVPSIVAFGTEEQKQRFLPPTFRGEMIWCQLFSE
PGAGSDLAGLSTKATRTDGGWRITGQKIWTTAAQFSQWGALLARTDPSAPKHSGITYFLLDMKSEGVDVKPLRELTGNAM
FNTVYIDDVFVPDECVLGEVNRGWEVSRNTLTAERVSIGSSEANFLATLSQFVEFVRDGQFDQVAQHRAGQLIAEGHAAK
VLNLRSTLLTLAGGDAMPSAAISKLLSMRTGQGYAEFAVSSFGTDAAIGDTDQLPGKWGEYLLASRATTIYGGTSEVQLN
IIAERLLGLPRDP

Sequences:

>Translated_733_residues
MPIAINPEHQELADSVRALVARIAPSETLHEAMETEVGNPPPYWQAAAEQGLQGVHLAESVGGQGFGVLELAIVLAEFGY
GAVPGPFVPSAIASALISAHDPDAKALAGLASGAEIAAYGLNCCALTATRQGSSLVIRGELRAVPAAAQASLLVLPVAID
SGEAWVVLRADQLEIEPVKSLDPLRPIADVRANAVEVGDDVVLTNLSMGTAHALMTTLLSAEAIGVARWATDTASSYAKI
REQFGRPIGQFQAIKHKCAEMIADTERATAAVWDAARAIDEARENRWDTAGSHVEFAAAVAATLAPAAAQRCAQDCIQVH
GGIGFTWEHDTNVYYRRALMLAASFGRSSDYPQKVVDTATTTGMRAVDIDLDPETEKLRAEIRAEVAALKEIEREQRKVA
IAEGGWVLPYLPKPWGRAAGPVEQIIIAQEFASGRVKRPQTGIATWIVPSIVAFGTEEQKQRFLPPTFRGEMIWCQLFSE
PGAGSDLAGLSTKATRTDGGWRITGQKIWTTAAQFSQWGALLARTDPSAPKHSGITYFLLDMKSEGVDVKPLRELTGNAM
FNTVYIDDVFVPDECVLGEVNRGWEVSRNTLTAERVSIGSSEANFLATLSQFVEFVRDGQFDQVAQHRAGQLIAEGHAAK
VLNLRSTLLTLAGGDAMPSAAISKLLSMRTGQGYAEFAVSSFGTDAAIGDTDQLPGKWGEYLLASRATTIYGGTSEVQLN
IIAERLLGLPRDP
>Mature_732_residues
PIAINPEHQELADSVRALVARIAPSETLHEAMETEVGNPPPYWQAAAEQGLQGVHLAESVGGQGFGVLELAIVLAEFGYG
AVPGPFVPSAIASALISAHDPDAKALAGLASGAEIAAYGLNCCALTATRQGSSLVIRGELRAVPAAAQASLLVLPVAIDS
GEAWVVLRADQLEIEPVKSLDPLRPIADVRANAVEVGDDVVLTNLSMGTAHALMTTLLSAEAIGVARWATDTASSYAKIR
EQFGRPIGQFQAIKHKCAEMIADTERATAAVWDAARAIDEARENRWDTAGSHVEFAAAVAATLAPAAAQRCAQDCIQVHG
GIGFTWEHDTNVYYRRALMLAASFGRSSDYPQKVVDTATTTGMRAVDIDLDPETEKLRAEIRAEVAALKEIEREQRKVAI
AEGGWVLPYLPKPWGRAAGPVEQIIIAQEFASGRVKRPQTGIATWIVPSIVAFGTEEQKQRFLPPTFRGEMIWCQLFSEP
GAGSDLAGLSTKATRTDGGWRITGQKIWTTAAQFSQWGALLARTDPSAPKHSGITYFLLDMKSEGVDVKPLRELTGNAMF
NTVYIDDVFVPDECVLGEVNRGWEVSRNTLTAERVSIGSSEANFLATLSQFVEFVRDGQFDQVAQHRAGQLIAEGHAAKV
LNLRSTLLTLAGGDAMPSAAISKLLSMRTGQGYAEFAVSSFGTDAAIGDTDQLPGKWGEYLLASRATTIYGGTSEVQLNI
IAERLLGLPRDP

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=288, Percent_Identity=28.4722222222222, Blast_Score=100, Evalue=4e-21,
Organism=Homo sapiens, GI4501859, Length=292, Percent_Identity=28.0821917808219, Blast_Score=96, Evalue=1e-19,
Organism=Homo sapiens, GI4501857, Length=322, Percent_Identity=28.2608695652174, Blast_Score=94, Evalue=6e-19,
Organism=Homo sapiens, GI187960098, Length=205, Percent_Identity=30.2439024390244, Blast_Score=83, Evalue=1e-15,
Organism=Homo sapiens, GI4557231, Length=205, Percent_Identity=30.2439024390244, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI226958414, Length=321, Percent_Identity=24.9221183800623, Blast_Score=82, Evalue=3e-15,
Organism=Homo sapiens, GI226958412, Length=321, Percent_Identity=24.9221183800623, Blast_Score=82, Evalue=3e-15,
Organism=Homo sapiens, GI21361497, Length=170, Percent_Identity=32.9411764705882, Blast_Score=78, Evalue=3e-14,
Organism=Homo sapiens, GI4557235, Length=161, Percent_Identity=30.4347826086957, Blast_Score=74, Evalue=6e-13,
Organism=Homo sapiens, GI76496475, Length=161, Percent_Identity=30.4347826086957, Blast_Score=74, Evalue=7e-13,
Organism=Escherichia coli, GI87081958, Length=297, Percent_Identity=27.2727272727273, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1786223, Length=146, Percent_Identity=28.7671232876712, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17508101, Length=290, Percent_Identity=32.7586206896552, Blast_Score=118, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI17506239, Length=338, Percent_Identity=28.698224852071, Blast_Score=102, Evalue=8e-22,
Organism=Caenorhabditis elegans, GI17570075, Length=403, Percent_Identity=26.302729528536, Blast_Score=95, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17569725, Length=342, Percent_Identity=25.7309941520468, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI71990804, Length=233, Percent_Identity=28.3261802575107, Blast_Score=86, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI32563615, Length=159, Percent_Identity=34.5911949685535, Blast_Score=84, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17551932, Length=287, Percent_Identity=26.1324041811847, Blast_Score=84, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17534899, Length=289, Percent_Identity=26.2975778546713, Blast_Score=84, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17505929, Length=183, Percent_Identity=28.4153005464481, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17538396, Length=192, Percent_Identity=26.5625, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24646207, Length=297, Percent_Identity=28.6195286195286, Blast_Score=100, Evalue=7e-21,
Organism=Drosophila melanogaster, GI24666513, Length=290, Percent_Identity=26.8965517241379, Blast_Score=85, Evalue=2e-16,
Organism=Drosophila melanogaster, GI21356377, Length=288, Percent_Identity=26.7361111111111, Blast_Score=83, Evalue=6e-16,
Organism=Drosophila melanogaster, GI24660351, Length=317, Percent_Identity=26.4984227129338, Blast_Score=80, Evalue=4e-15,
Organism=Drosophila melanogaster, GI21355753, Length=335, Percent_Identity=26.5671641791045, Blast_Score=79, Evalue=2e-14,
Organism=Drosophila melanogaster, GI281363737, Length=159, Percent_Identity=28.9308176100629, Blast_Score=72, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 78361; Mature: 78230

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIAINPEHQELADSVRALVARIAPSETLHEAMETEVGNPPPYWQAAAEQGLQGVHLAES
CCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHCCCCCEEHHHH
VGGQGFGVLELAIVLAEFGYGAVPGPFVPSAIASALISAHDPDAKALAGLASGAEIAAYG
CCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHCC
LNCCALTATRQGSSLVIRGELRAVPAAAQASLLVLPVAIDSGEAWVVLRADQLEIEPVKS
CCEEEEEEECCCCEEEEEECCCCCCCHHCCEEEEEEEEECCCCEEEEEECCCCCCCCCCC
LDPLRPIADVRANAVEVGDDVVLTNLSMGTAHALMTTLLSAEAIGVARWATDTASSYAKI
CCCCCHHHHHCCCCEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
REQFGRPIGQFQAIKHKCAEMIADTERATAAVWDAARAIDEARENRWDTAGSHVEFAAAV
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
AATLAPAAAQRCAQDCIQVHGGIGFTWEHDTNVYYRRALMLAASFGRSSDYPQKVVDTAT
HHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHH
TTGMRAVDIDLDPETEKLRAEIRAEVAALKEIEREQRKVAIAEGGWVLPYLPKPWGRAAG
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEECCCCCCCCCCCC
PVEQIIIAQEFASGRVKRPQTGIATWIVPSIVAFGTEEQKQRFLPPTFRGEMIWCQLFSE
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCCCCCEEEEEEECC
PGAGSDLAGLSTKATRTDGGWRITGQKIWTTAAQFSQWGALLARTDPSAPKHSGITYFLL
CCCCCCCCCCCCCCEECCCCEEEECHHHHHHHHHHHHHHHEEECCCCCCCCCCCCEEEEE
DMKSEGVDVKPLRELTGNAMFNTVYIDDVFVPDECVLGEVNRGWEVSRNTLTAERVSIGS
EECCCCCCCHHHHHHCCCCEEEEEEEEEEECCCHHHCCCCCCCCCCCCCCEEHHHHCCCC
SEANFLATLSQFVEFVRDGQFDQVAQHRAGQLIAEGHAAKVLNLRSTLLTLAGGDAMPSA
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHCCCCCCCHH
AISKLLSMRTGQGYAEFAVSSFGTDAAIGDTDQLPGKWGEYLLASRATTIYGGTSEVQLN
HHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCEEEECCCCCEEHH
IIAERLLGLPRDP
HHHHHHHCCCCCC
>Mature Secondary Structure 
PIAINPEHQELADSVRALVARIAPSETLHEAMETEVGNPPPYWQAAAEQGLQGVHLAES
CCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHCCCCCEEHHHH
VGGQGFGVLELAIVLAEFGYGAVPGPFVPSAIASALISAHDPDAKALAGLASGAEIAAYG
CCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHCC
LNCCALTATRQGSSLVIRGELRAVPAAAQASLLVLPVAIDSGEAWVVLRADQLEIEPVKS
CCEEEEEEECCCCEEEEEECCCCCCCHHCCEEEEEEEEECCCCEEEEEECCCCCCCCCCC
LDPLRPIADVRANAVEVGDDVVLTNLSMGTAHALMTTLLSAEAIGVARWATDTASSYAKI
CCCCCHHHHHCCCCEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
REQFGRPIGQFQAIKHKCAEMIADTERATAAVWDAARAIDEARENRWDTAGSHVEFAAAV
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
AATLAPAAAQRCAQDCIQVHGGIGFTWEHDTNVYYRRALMLAASFGRSSDYPQKVVDTAT
HHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHH
TTGMRAVDIDLDPETEKLRAEIRAEVAALKEIEREQRKVAIAEGGWVLPYLPKPWGRAAG
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEECCCCCCCCCCCC
PVEQIIIAQEFASGRVKRPQTGIATWIVPSIVAFGTEEQKQRFLPPTFRGEMIWCQLFSE
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCCCCCEEEEEEECC
PGAGSDLAGLSTKATRTDGGWRITGQKIWTTAAQFSQWGALLARTDPSAPKHSGITYFLL
CCCCCCCCCCCCCCEECCCCEEEECHHHHHHHHHHHHHHHEEECCCCCCCCCCCCEEEEE
DMKSEGVDVKPLRELTGNAMFNTVYIDDVFVPDECVLGEVNRGWEVSRNTLTAERVSIGS
EECCCCCCCHHHHHHCCCCEEEEEEEEEEECCCHHHCCCCCCCCCCCCCCEEHHHHCCCC
SEANFLATLSQFVEFVRDGQFDQVAQHRAGQLIAEGHAAKVLNLRSTLLTLAGGDAMPSA
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHCCCCCCCHH
AISKLLSMRTGQGYAEFAVSSFGTDAAIGDTDQLPGKWGEYLLASRATTIYGGTSEVQLN
HHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCEEEECCCCCEEHH
IIAERLLGLPRDP
HHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]