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The map label for this gene is 41409811

Identifier: 41409811

GI number: 41409811

Start: 4130192

End: 4131472

Strand: Reverse

Name: 41409811

Synonym: MAP3713c

Alternate gene names: NA

Gene position: 4131472-4130192 (Counterclockwise)

Preceding gene: 41409814

Following gene: 41409809

Centisome position: 85.54

GC content: 71.82

Gene sequence:

>1281_bases
ATGAACCACATGACCCGTCCGGTTTCGCTGGAGGTGGCCGGGCGGCGGGTCACCATCACCCATCCGGACAAGGTGGTGTT
CCCCCGCGCCGGCGGCGGCGAAACCACCGGTTCTGCTGCCGGCCCGCACACCAAACTCGACCTGGTCCGCTATTACCTGT
CCGTGGCCGACGGCGCACTGCGCGGTGTGGCCGGGCGCCCGATGATCCTGAAGCGCTTCGTCAAGGGCATCACGCAAGAG
GCGGTGTTCCAGAAACGCGCGCCGGCGAACCGGCCGGACTGGGTCGACGTCGCCGAATTACGTTATGCGCGAGGCACTTC
CGCCGCCGAAGCGGTCATTCACGACGCCGCCGGGCTGGCCTGGCTGATCAACCTGGGCTGTGTCGACCTGAACCCGCATC
CGGTGCTGGCCGACGACCTCGACCACCCCGACGAGCTGCGCGTCGACCTGGATCCGATGCCCGGGGTGTCCTGGCGACGG
ATCGTGGACGTCGCGCTGGTCGCCCGCGAGGTGCTCGAGGACTACGGCCTGACCCCGTGGCCGAAGACGTCCGGGTCGCG
CGGCTTCCCCATCTATGCCCGCATCGCCCGGCGCTGGGAGTTCCGCCAGGTGCGGCTGGCCGCGCAGACCGTGGCCCGCG
AGGTGGAGCGGCGCGCGCCCGAGGCGGCGACCAGCCGCTGGTGGAAGGAGGAGCGCGAGGGGGTGTTCGTCGACTTCAAC
CAGAACGCCAAGGACCGCACCGTCGCGTCGGCCTACTCGGTGCGGGCGACCCCGGACGCCCGGGTGTCGACGCCGTTGCG
CTGGGACGAGGTGGCCGGCTGCCGGCCCGAGGCGTTCACTATCGACACCGTGCCTGCCCGGTTGGCCGAGATCGGCGACC
CGTGGGCGGGCATGGACGACGCTGTCGGCGACCTCGACCGGCTGCTGGTGCTGGCCGAGGAGCTGGGTCCGCCGGAGCGG
GCGCCGAAGGGCGCCGGGACACGATCCGGCGGCCGGCGCCGGTCCTCGATGCCGCTGATCGAGGTGGCTCGCACCAAGAC
GAGGGACGAGGCGATGGCGGCGCTGGACGTCTGGCGCGACCGCCATCCGGAGGCCGCCGCCCGGCTGCAGCCGGCCGACG
TCCTGGTCGACGGGATGCGCGGGCCCAGCTCGATCTGGTACCGGATCCGGATCAACCTGCAGCACATCCCCGAGGACCAG
CGCCCACCGCAGGAGGAGCTGATCGCCGACTACTCCCCCTGGCAGGGATACGGCGGCCGGCAGAAACCGTCCTGGGGCTA
G

Upstream 100 bases:

>100_bases
CCGCTTTGGTGGCCTGACCGGGCAGGCCAAGGAGGTTAGGCATGGAATCCACCATATGTGACGTCCGTCTCAGTACGGCC
AGAAATTCTGGCGAATTAGC

Downstream 100 bases:

>100_bases
ATGCCGACCCGGGTGATCGCGTTGTGCTTGCGCAGGTAGCAGTACCAGGTGACGGCCAGCAAGCCCAGGAAGAACACCAC
ATAGAAGCGCAGCGCGGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MNHMTRPVSLEVAGRRVTITHPDKVVFPRAGGGETTGSAAGPHTKLDLVRYYLSVADGALRGVAGRPMILKRFVKGITQE
AVFQKRAPANRPDWVDVAELRYARGTSAAEAVIHDAAGLAWLINLGCVDLNPHPVLADDLDHPDELRVDLDPMPGVSWRR
IVDVALVAREVLEDYGLTPWPKTSGSRGFPIYARIARRWEFRQVRLAAQTVAREVERRAPEAATSRWWKEEREGVFVDFN
QNAKDRTVASAYSVRATPDARVSTPLRWDEVAGCRPEAFTIDTVPARLAEIGDPWAGMDDAVGDLDRLLVLAEELGPPER
APKGAGTRSGGRRRSSMPLIEVARTKTRDEAMAALDVWRDRHPEAAARLQPADVLVDGMRGPSSIWYRIRINLQHIPEDQ
RPPQEELIADYSPWQGYGGRQKPSWG

Sequences:

>Translated_426_residues
MNHMTRPVSLEVAGRRVTITHPDKVVFPRAGGGETTGSAAGPHTKLDLVRYYLSVADGALRGVAGRPMILKRFVKGITQE
AVFQKRAPANRPDWVDVAELRYARGTSAAEAVIHDAAGLAWLINLGCVDLNPHPVLADDLDHPDELRVDLDPMPGVSWRR
IVDVALVAREVLEDYGLTPWPKTSGSRGFPIYARIARRWEFRQVRLAAQTVAREVERRAPEAATSRWWKEEREGVFVDFN
QNAKDRTVASAYSVRATPDARVSTPLRWDEVAGCRPEAFTIDTVPARLAEIGDPWAGMDDAVGDLDRLLVLAEELGPPER
APKGAGTRSGGRRRSSMPLIEVARTKTRDEAMAALDVWRDRHPEAAARLQPADVLVDGMRGPSSIWYRIRINLQHIPEDQ
RPPQEELIADYSPWQGYGGRQKPSWG
>Mature_426_residues
MNHMTRPVSLEVAGRRVTITHPDKVVFPRAGGGETTGSAAGPHTKLDLVRYYLSVADGALRGVAGRPMILKRFVKGITQE
AVFQKRAPANRPDWVDVAELRYARGTSAAEAVIHDAAGLAWLINLGCVDLNPHPVLADDLDHPDELRVDLDPMPGVSWRR
IVDVALVAREVLEDYGLTPWPKTSGSRGFPIYARIARRWEFRQVRLAAQTVAREVERRAPEAATSRWWKEEREGVFVDFN
QNAKDRTVASAYSVRATPDARVSTPLRWDEVAGCRPEAFTIDTVPARLAEIGDPWAGMDDAVGDLDRLLVLAEELGPPER
APKGAGTRSGGRRRSSMPLIEVARTKTRDEAMAALDVWRDRHPEAAARLQPADVLVDGMRGPSSIWYRIRINLQHIPEDQ
RPPQEELIADYSPWQGYGGRQKPSWG

Specific function: Unknown

COG id: COG3285

COG function: function code L; Predicted eukaryotic-type DNA primase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATP-dependent DNA ligase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012309
- InterPro:   IPR012310
- InterPro:   IPR014146
- InterPro:   IPR002755
- InterPro:   IPR014144
- InterPro:   IPR014145
- InterPro:   IPR012340
- InterPro:   IPR016027 [H]

Pfam domain/function: PF04679 DNA_ligase_A_C; PF01068 DNA_ligase_A_M; PF01896 DNA_primase_S [H]

EC number: NA

Molecular weight: Translated: 47351; Mature: 47351

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHMTRPVSLEVAGRRVTITHPDKVVFPRAGGGETTGSAAGPHTKLDLVRYYLSVADGAL
CCCCCCCEEEEECCCEEEEECCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
RGVAGRPMILKRFVKGITQEAVFQKRAPANRPDWVDVAELRYARGTSAAEAVIHDAAGLA
HCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHE
WLINLGCVDLNPHPVLADDLDHPDELRVDLDPMPGVSWRRIVDVALVAREVLEDYGLTPW
EHEECCEECCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
PKTSGSRGFPIYARIARRWEFRQVRLAAQTVAREVERRAPEAATSRWWKEEREGVFVDFN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEC
QNAKDRTVASAYSVRATPDARVSTPLRWDEVAGCRPEAFTIDTVPARLAEIGDPWAGMDD
CCCCHHHHHHHEEEECCCCCCCCCCCCHHHHCCCCCCCEEECCHHHHHHHCCCCCCCCCH
AVGDLDRLLVLAEELGPPERAPKGAGTRSGGRRRSSMPLIEVARTKTRDEAMAALDVWRD
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RHPEAAARLQPADVLVDGMRGPSSIWYRIRINLQHIPEDQRPPQEELIADYSPWQGYGGR
CCCHHHHHCCHHHHHHCCCCCCCEEEEEEEEEEEECCCCCCCCHHHHHCCCCCCCCCCCC
QKPSWG
CCCCCC
>Mature Secondary Structure
MNHMTRPVSLEVAGRRVTITHPDKVVFPRAGGGETTGSAAGPHTKLDLVRYYLSVADGAL
CCCCCCCEEEEECCCEEEEECCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
RGVAGRPMILKRFVKGITQEAVFQKRAPANRPDWVDVAELRYARGTSAAEAVIHDAAGLA
HCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHE
WLINLGCVDLNPHPVLADDLDHPDELRVDLDPMPGVSWRRIVDVALVAREVLEDYGLTPW
EHEECCEECCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
PKTSGSRGFPIYARIARRWEFRQVRLAAQTVAREVERRAPEAATSRWWKEEREGVFVDFN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEC
QNAKDRTVASAYSVRATPDARVSTPLRWDEVAGCRPEAFTIDTVPARLAEIGDPWAGMDD
CCCCHHHHHHHEEEECCCCCCCCCCCCHHHHCCCCCCCEEECCHHHHHHHCCCCCCCCCH
AVGDLDRLLVLAEELGPPERAPKGAGTRSGGRRRSSMPLIEVARTKTRDEAMAALDVWRD
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RHPEAAARLQPADVLVDGMRGPSSIWYRIRINLQHIPEDQRPPQEELIADYSPWQGYGGR
CCCHHHHHCCHHHHHHCCCCCCCEEEEEEEEEEEECCCCCCCCHHHHHCCCCCCCCCCCC
QKPSWG
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]