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The map label for this gene is fadE26_2

Identifier: 41408683

GI number: 41408683

Start: 2909589

End: 2910773

Strand: Direct

Name: fadE26_2

Synonym: MAP2585

Alternate gene names: 41408683

Gene position: 2909589-2910773 (Clockwise)

Preceding gene: 41408682

Following gene: 41408684

Centisome position: 60.24

GC content: 67.76

Gene sequence:

>1185_bases
ATGGATCTGGAATACACGCCGGAGCAACAGCAGCTGCGCGCCGAGATCCGTGCGACGCTTCAGACCGTGATGACGCCCGA
ACGCGTCGCCGCGGTCAGCGAGCAGATGGACGGCGGTCCCGCGGTGCGCGAATGCGTCCGCGCCCTGGCGGCGGCCAACC
TGCTGGGTGTCGGATGGCCCAAAGAGTATGGTGGACGAGGGTTTTCGGCCATCGAGCAGTTCATCTTCGCCGAGGAGGCG
CGCCGGGTGAGCGCACCCATCCCGCTGGTGACGCTCAACACCGCCGGCCCGACGTTGATGCACTACGGCACCGACGAGCA
GAAGCGGCGGTTTCTGCCGGCGATCCTGGACGGCACCGTGGAATTCGCCATCGGCTACTCCGAGCCGGGGGCGGGCAGCG
ACCTGGCCTCGGTGCACACGACGGCCGTGCGTGTCGGTGACGAGTATGTGATCAACGGTCAAAAGATGTTCACCAGCGGC
GCCGCCTACGCCGACTACATCTGGCTGGCCGTGCGCACCGATCCGGATGCCAAGAAGCACAAGGGCATTTCCATCCTCAT
CGTGCCGACCTCCTCGCCCGGATTCTCCTGGCAACCGCTGCACACCATGCCGGGCATCTCGACCTTCTACACGTTCTACG
ACGACGTGCGGGTGCCGGTCAGCGCGCTGGTGGGGGCCGAGAACCAGGGCTGGCAGCTGATCACCACGCAGTTGAACTTC
GAGCGCGCCGCCCTGGGCAACCTGGGCGCGCTCGAGCCGCTGTTCGACAAGACGCTGGACTGGGCGCTGTCCACCGAACT
CGACGGCGGCCGGGTCATCGACCAGCCCTGGGTGCGATCGGCGCTGGCCCGGGTCGAAGCGCAGGTGGCCGCCTACAAGC
TCGTCAACCTGCGGGTGAACGCGGCGATGACGAAGGGTGCGCTCAACATGGGAGAAGCCTCGGCCGCGAAGGTGTTCGGC
ACCGAGCTCACGCAGCAGGTCGCCCGGGAGCTGCTCGAGGTGCTCGACGGCAACGGGGTGCGGCGCGGCGCCGAGGCTCC
GCTGCGTGGCGCGCTGGAATCCGCCTACCGTCAGGCCGTCATCAACACCTTCGGGGGCGGCGCCAACGAGATTCAACGTG
ACATCATCGCCATGGCCGCGTTGGGCATGCCCCGCGCACCCCGCGACCTTCGGGCCGCGAATTAG

Upstream 100 bases:

>100_bases
CGGTATCCCCGCATCGAGCTGGTGGGCGAGGTGGACCGAATGCGGGCCACCATGGTGCCCGGGGTGAAACGCATGCCGGT
GCGAATGGGGGCCTGAGCCG

Downstream 100 bases:

>100_bases
CAAGGAGGACAGGACCGAAGTGACCGACTCAGAAACCGTCAGCGCCAAGGTGCGGGCCCTGGTCGGCCAGCCGACCGGCG
GCACCGGAAAACCCTCGCTG

Product: FadE26_2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MDLEYTPEQQQLRAEIRATLQTVMTPERVAAVSEQMDGGPAVRECVRALAAANLLGVGWPKEYGGRGFSAIEQFIFAEEA
RRVSAPIPLVTLNTAGPTLMHYGTDEQKRRFLPAILDGTVEFAIGYSEPGAGSDLASVHTTAVRVGDEYVINGQKMFTSG
AAYADYIWLAVRTDPDAKKHKGISILIVPTSSPGFSWQPLHTMPGISTFYTFYDDVRVPVSALVGAENQGWQLITTQLNF
ERAALGNLGALEPLFDKTLDWALSTELDGGRVIDQPWVRSALARVEAQVAAYKLVNLRVNAAMTKGALNMGEASAAKVFG
TELTQQVARELLEVLDGNGVRRGAEAPLRGALESAYRQAVINTFGGGANEIQRDIIAMAALGMPRAPRDLRAAN

Sequences:

>Translated_394_residues
MDLEYTPEQQQLRAEIRATLQTVMTPERVAAVSEQMDGGPAVRECVRALAAANLLGVGWPKEYGGRGFSAIEQFIFAEEA
RRVSAPIPLVTLNTAGPTLMHYGTDEQKRRFLPAILDGTVEFAIGYSEPGAGSDLASVHTTAVRVGDEYVINGQKMFTSG
AAYADYIWLAVRTDPDAKKHKGISILIVPTSSPGFSWQPLHTMPGISTFYTFYDDVRVPVSALVGAENQGWQLITTQLNF
ERAALGNLGALEPLFDKTLDWALSTELDGGRVIDQPWVRSALARVEAQVAAYKLVNLRVNAAMTKGALNMGEASAAKVFG
TELTQQVARELLEVLDGNGVRRGAEAPLRGALESAYRQAVINTFGGGANEIQRDIIAMAALGMPRAPRDLRAAN
>Mature_394_residues
MDLEYTPEQQQLRAEIRATLQTVMTPERVAAVSEQMDGGPAVRECVRALAAANLLGVGWPKEYGGRGFSAIEQFIFAEEA
RRVSAPIPLVTLNTAGPTLMHYGTDEQKRRFLPAILDGTVEFAIGYSEPGAGSDLASVHTTAVRVGDEYVINGQKMFTSG
AAYADYIWLAVRTDPDAKKHKGISILIVPTSSPGFSWQPLHTMPGISTFYTFYDDVRVPVSALVGAENQGWQLITTQLNF
ERAALGNLGALEPLFDKTLDWALSTELDGGRVIDQPWVRSALARVEAQVAAYKLVNLRVNAAMTKGALNMGEASAAKVFG
TELTQQVARELLEVLDGNGVRRGAEAPLRGALESAYRQAVINTFGGGANEIQRDIIAMAALGMPRAPRDLRAAN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI226958412, Length=383, Percent_Identity=26.8929503916449, Blast_Score=139, Evalue=3e-33,
Organism=Homo sapiens, GI4501857, Length=381, Percent_Identity=27.5590551181102, Blast_Score=135, Evalue=8e-32,
Organism=Homo sapiens, GI226958414, Length=342, Percent_Identity=26.9005847953216, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI4501859, Length=383, Percent_Identity=28.1984334203655, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI187960098, Length=386, Percent_Identity=26.9430051813472, Blast_Score=122, Evalue=4e-28,
Organism=Homo sapiens, GI4557231, Length=386, Percent_Identity=26.9430051813472, Blast_Score=122, Evalue=4e-28,
Organism=Homo sapiens, GI4557233, Length=343, Percent_Identity=27.9883381924198, Blast_Score=105, Evalue=5e-23,
Organism=Homo sapiens, GI7656849, Length=348, Percent_Identity=27.0114942528736, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI76496475, Length=295, Percent_Identity=28.4745762711864, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI4557235, Length=295, Percent_Identity=28.4745762711864, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI21361497, Length=357, Percent_Identity=26.3305322128852, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI38505218, Length=172, Percent_Identity=28.4883720930233, Blast_Score=72, Evalue=9e-13,
Organism=Escherichia coli, GI87081958, Length=379, Percent_Identity=28.2321899736148, Blast_Score=117, Evalue=9e-28,
Organism=Escherichia coli, GI1786223, Length=394, Percent_Identity=24.3654822335025, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI87081702, Length=205, Percent_Identity=29.2682926829268, Blast_Score=66, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17538396, Length=380, Percent_Identity=28.1578947368421, Blast_Score=138, Evalue=4e-33,
Organism=Caenorhabditis elegans, GI17506239, Length=335, Percent_Identity=32.2388059701493, Blast_Score=137, Evalue=9e-33,
Organism=Caenorhabditis elegans, GI17508101, Length=382, Percent_Identity=29.8429319371728, Blast_Score=135, Evalue=3e-32,
Organism=Caenorhabditis elegans, GI17570075, Length=391, Percent_Identity=27.3657289002558, Blast_Score=127, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI71990804, Length=279, Percent_Identity=32.6164874551971, Blast_Score=124, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI17505929, Length=354, Percent_Identity=28.2485875706215, Blast_Score=122, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI17569725, Length=351, Percent_Identity=27.3504273504274, Blast_Score=120, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI17551932, Length=345, Percent_Identity=28.695652173913, Blast_Score=119, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI32563615, Length=229, Percent_Identity=34.061135371179, Blast_Score=113, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17534899, Length=388, Percent_Identity=24.7422680412371, Blast_Score=107, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI71982178, Length=230, Percent_Identity=27.8260869565217, Blast_Score=88, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI71985184, Length=390, Percent_Identity=24.6153846153846, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17533517, Length=330, Percent_Identity=25.7575757575758, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI71985192, Length=317, Percent_Identity=23.9747634069401, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17562446, Length=278, Percent_Identity=26.978417266187, Blast_Score=75, Evalue=7e-14,
Organism=Drosophila melanogaster, GI21355753, Length=381, Percent_Identity=28.6089238845144, Blast_Score=126, Evalue=3e-29,
Organism=Drosophila melanogaster, GI24646207, Length=345, Percent_Identity=28.695652173913, Blast_Score=107, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24660351, Length=390, Percent_Identity=27.6923076923077, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI21356377, Length=345, Percent_Identity=26.6666666666667, Blast_Score=105, Evalue=4e-23,
Organism=Drosophila melanogaster, GI24666513, Length=389, Percent_Identity=25.9640102827763, Blast_Score=105, Evalue=5e-23,
Organism=Drosophila melanogaster, GI281363737, Length=342, Percent_Identity=24.2690058479532, Blast_Score=91, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 42565; Mature: 42565

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLEYTPEQQQLRAEIRATLQTVMTPERVAAVSEQMDGGPAVRECVRALAAANLLGVGWP
CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCC
KEYGGRGFSAIEQFIFAEEARRVSAPIPLVTLNTAGPTLMHYGTDEQKRRFLPAILDGTV
HHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCHHHHHHHHHHHCCCE
EFAIGYSEPGAGSDLASVHTTAVRVGDEYVINGQKMFTSGAAYADYIWLAVRTDPDAKKH
EEEEECCCCCCCCCHHHHHHHHEEECCEEEECCCHHCCCCCCEEEEEEEEEECCCCHHHH
KGISILIVPTSSPGFSWQPLHTMPGISTFYTFYDDVRVPVSALVGAENQGWQLITTQLNF
CCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHCCCCCCCEEEEEEECC
ERAALGNLGALEPLFDKTLDWALSTELDGGRVIDQPWVRSALARVEAQVAAYKLVNLRVN
HHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHEEEEEE
AAMTKGALNMGEASAAKVFGTELTQQVARELLEVLDGNGVRRGAEAPLRGALESAYRQAV
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
INTFGGGANEIQRDIIAMAALGMPRAPRDLRAAN
HHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MDLEYTPEQQQLRAEIRATLQTVMTPERVAAVSEQMDGGPAVRECVRALAAANLLGVGWP
CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCC
KEYGGRGFSAIEQFIFAEEARRVSAPIPLVTLNTAGPTLMHYGTDEQKRRFLPAILDGTV
HHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCHHHHHHHHHHHCCCE
EFAIGYSEPGAGSDLASVHTTAVRVGDEYVINGQKMFTSGAAYADYIWLAVRTDPDAKKH
EEEEECCCCCCCCCHHHHHHHHEEECCEEEECCCHHCCCCCCEEEEEEEEEECCCCHHHH
KGISILIVPTSSPGFSWQPLHTMPGISTFYTFYDDVRVPVSALVGAENQGWQLITTQLNF
CCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHCCCCCCCEEEEEEECC
ERAALGNLGALEPLFDKTLDWALSTELDGGRVIDQPWVRSALARVEAQVAAYKLVNLRVN
HHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHEEEEEE
AAMTKGALNMGEASAAKVFGTELTQQVARELLEVLDGNGVRRGAEAPLRGALESAYRQAV
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
INTFGGGANEIQRDIIAMAALGMPRAPRDLRAAN
HHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]