| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is cyp142 [H]
Identifier: 41408682
GI number: 41408682
Start: 2908388
End: 2909584
Strand: Direct
Name: cyp142 [H]
Synonym: MAP2584
Alternate gene names: 41408682
Gene position: 2908388-2909584 (Clockwise)
Preceding gene: 41408676
Following gene: 41408683
Centisome position: 60.22
GC content: 67.67
Gene sequence:
>1197_bases GTGCAGACTCATCCGCCGCTGCGCTCGCCGAGCTTCCCGCTGCATTCCCCGGACTTCTACGCGGGTAACCCGTATCCCGC CTACCGGGAGCTGCGCGCGACGGCGCCGGTGTGCTGGAACGACGTCACCAACTTCTGGGCGCTGCTGAAATACGAGGACA TCCGGTTCGTGTCGAGCAATCCGGCTCTGTTCACCTCGACCCGGGGCATCACGATCCCGGATCCGCAGCTGCCCAACCCG GTGCAGCAGGGCAGCCTGATCTTCACCGATCCGCCGCGGCACCGGCAGCTGCGCAAGCTGATCAACTCCGGATTCACCCG GCGGCGTGTTTCGGTGCTGGAACCGAAGATCCGCAAGATCGTGCGCGGCATTCTCGACGGCATCGAACGCGGCGCCGTGC ACGAGTTCGCCGAACAGATCGCCGCTCCCCTGCCCACCCGGATGATCGCCGAATTGATCGGGGCCCCGCCCGACGACTGG GAGCAATTCCGGGCGTGGTCGGATGCGGCCACCGGGACGGCCGACCCGGAGATCGAGCTGGACCCGGCGGTGGCGGCCGG GCAACTCTACGAGTACTTCCAGCGGCTGATCGCGGCACGCCGCGCGCGACCGCGCGCCGACCTGCTCTCGGTGCTGGCCG AGGCCGAGATCGACGAGCACCGGTTGACCGACGAAGACCTGCTCAACTTCGCCTTTCTGCTGCTGGTGGCCGGCAACGAA ACCACCCGCAACCTGATCGCGCTGGGGACGCTGGCCCTGATCGCGCATCCCGACCAATACCGCCTGCTCGTCGAGGAGCC CGCCCGCATCCCGCTTGCGGTCGAGGAGATGTTGCGGTGGAACAGTCCCGTGGTACACATGGCCCGCACCGCGACCGCCG ACGTCGAGATCCGCGGACAGCGGATCCGCGCCGGCGAGGTGGTGGTGATGCTCTACGGGTCGGCCAACCGGGACGAGGAC GTATTCGGCCCGGACTCCGAGGAATTCGATGTGACCCGCCACCCGAACCCGCACATCGCCTTCGGCTGCGGTGAACATTC TTGTGTGGGCGCACAATTGGCGCGACTGGAGGCGACGGTGTTCTTCGAGGAGCTGCTGCGCCGGTATCCCCGCATCGAGC TGGTGGGCGAGGTGGACCGAATGCGGGCCACCATGGTGCCCGGGGTGAAACGCATGCCGGTGCGAATGGGGGCCTGA
Upstream 100 bases:
>100_bases TGGCACCGTGTTGACAGCACGCGGCGGCGCAGAGTAGACACAGTCGGCAGACAGATTGAACCAATCTGTCGGATCGGGTG TCCTGCGAGAGGGGCTTGCC
Downstream 100 bases:
>100_bases GCCGATGGATCTGGAATACACGCCGGAGCAACAGCAGCTGCGCGCCGAGATCCGTGCGACGCTTCAGACCGTGATGACGC CCGAACGCGTCGCCGCGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 398; Mature: 398
Protein sequence:
>398_residues MQTHPPLRSPSFPLHSPDFYAGNPYPAYRELRATAPVCWNDVTNFWALLKYEDIRFVSSNPALFTSTRGITIPDPQLPNP VQQGSLIFTDPPRHRQLRKLINSGFTRRRVSVLEPKIRKIVRGILDGIERGAVHEFAEQIAAPLPTRMIAELIGAPPDDW EQFRAWSDAATGTADPEIELDPAVAAGQLYEYFQRLIAARRARPRADLLSVLAEAEIDEHRLTDEDLLNFAFLLLVAGNE TTRNLIALGTLALIAHPDQYRLLVEEPARIPLAVEEMLRWNSPVVHMARTATADVEIRGQRIRAGEVVVMLYGSANRDED VFGPDSEEFDVTRHPNPHIAFGCGEHSCVGAQLARLEATVFFEELLRRYPRIELVGEVDRMRATMVPGVKRMPVRMGA
Sequences:
>Translated_398_residues MQTHPPLRSPSFPLHSPDFYAGNPYPAYRELRATAPVCWNDVTNFWALLKYEDIRFVSSNPALFTSTRGITIPDPQLPNP VQQGSLIFTDPPRHRQLRKLINSGFTRRRVSVLEPKIRKIVRGILDGIERGAVHEFAEQIAAPLPTRMIAELIGAPPDDW EQFRAWSDAATGTADPEIELDPAVAAGQLYEYFQRLIAARRARPRADLLSVLAEAEIDEHRLTDEDLLNFAFLLLVAGNE TTRNLIALGTLALIAHPDQYRLLVEEPARIPLAVEEMLRWNSPVVHMARTATADVEIRGQRIRAGEVVVMLYGSANRDED VFGPDSEEFDVTRHPNPHIAFGCGEHSCVGAQLARLEATVFFEELLRRYPRIELVGEVDRMRATMVPGVKRMPVRMGA >Mature_398_residues MQTHPPLRSPSFPLHSPDFYAGNPYPAYRELRATAPVCWNDVTNFWALLKYEDIRFVSSNPALFTSTRGITIPDPQLPNP VQQGSLIFTDPPRHRQLRKLINSGFTRRRVSVLEPKIRKIVRGILDGIERGAVHEFAEQIAAPLPTRMIAELIGAPPDDW EQFRAWSDAATGTADPEIELDPAVAAGQLYEYFQRLIAARRARPRADLLSVLAEAEIDEHRLTDEDLLNFAFLLLVAGNE TTRNLIALGTLALIAHPDQYRLLVEEPARIPLAVEEMLRWNSPVVHMARTATADVEIRGQRIRAGEVVVMLYGSANRDED VFGPDSEEFDVTRHPNPHIAFGCGEHSCVGAQLARLEATVFFEELLRRYPRIELVGEVDRMRATMVPGVKRMPVRMGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
Organism=Homo sapiens, GI261278370, Length=176, Percent_Identity=29.5454545454545, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI195972896, Length=176, Percent_Identity=29.5454545454545, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI195972898, Length=176, Percent_Identity=29.5454545454545, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI261278372, Length=176, Percent_Identity=29.5454545454545, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI17933518, Length=192, Percent_Identity=31.25, Blast_Score=68, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 44748; Mature: 44748
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTHPPLRSPSFPLHSPDFYAGNPYPAYRELRATAPVCWNDVTNFWALLKYEDIRFVSSN CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHEECCEEEECCC PALFTSTRGITIPDPQLPNPVQQGSLIFTDPPRHRQLRKLINSGFTRRRVSVLEPKIRKI CCEEECCCCCCCCCCCCCCHHHCCCEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH VRGILDGIERGAVHEFAEQIAAPLPTRMIAELIGAPPDDWEQFRAWSDAATGTADPEIEL HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCEEE DPAVAAGQLYEYFQRLIAARRARPRADLLSVLAEAEIDEHRLTDEDLLNFAFLLLVAGNE CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHCCCCC TTRNLIALGTLALIAHPDQYRLLVEEPARIPLAVEEMLRWNSPVVHMARTATADVEIRGQ HHHHHHHHHHHHHEECCCHHEEEECCCCCCCHHHHHHHHCCCCCEEHHHHCCCCEEECCC RIRAGEVVVMLYGSANRDEDVFGPDSEEFDVTRHPNPHIAFGCGEHSCVGAQLARLEATV EEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHH FFEELLRRYPRIELVGEVDRMRATMVPGVKRMPVRMGA HHHHHHHHCCCEEEEHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MQTHPPLRSPSFPLHSPDFYAGNPYPAYRELRATAPVCWNDVTNFWALLKYEDIRFVSSN CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHEECCEEEECCC PALFTSTRGITIPDPQLPNPVQQGSLIFTDPPRHRQLRKLINSGFTRRRVSVLEPKIRKI CCEEECCCCCCCCCCCCCCHHHCCCEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH VRGILDGIERGAVHEFAEQIAAPLPTRMIAELIGAPPDDWEQFRAWSDAATGTADPEIEL HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCEEE DPAVAAGQLYEYFQRLIAARRARPRADLLSVLAEAEIDEHRLTDEDLLNFAFLLLVAGNE CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHCCCCC TTRNLIALGTLALIAHPDQYRLLVEEPARIPLAVEEMLRWNSPVVHMARTATADVEIRGQ HHHHHHHHHHHHHEECCCHHEEEECCCCCCCHHHHHHHHCCCCCEEHHHHCCCCEEECCC RIRAGEVVVMLYGSANRDEDVFGPDSEEFDVTRHPNPHIAFGCGEHSCVGAQLARLEATV EEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHH FFEELLRRYPRIELVGEVDRMRATMVPGVKRMPVRMGA HHHHHHHHCCCEEEEHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]