| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is cyp130 [H]
Identifier: 41408616
GI number: 41408616
Start: 2829128
End: 2830357
Strand: Direct
Name: cyp130 [H]
Synonym: MAP2518
Alternate gene names: 41408616
Gene position: 2829128-2830357 (Clockwise)
Preceding gene: 41408615
Following gene: 41408617
Centisome position: 58.58
GC content: 70.49
Gene sequence:
>1230_bases GTGTCTCACAACGTGCCGGTGGCGTTCGAGTTGCCCAACGCCGACACCTGGGCCGACCCGTGGCCGATGTACCGCGCGCT GCGTGACCACGACCCGGTGCACCACGTCGTCCCGCCCAAGCGCCCGGAGCACGACTACTACGTGCTGTCCCGGCACGCCG ACGTGTGGGCCGCGGCCCGCGACCACGAAACCTTCTCCTCGGCGAAGGGTTTGACGGTCAACTATGACGACCTGGAACTC ATTGGGCTGCAAGACAATCCGCCGTTCGTGATGCAGGACCCGCCGGTGCACACCGAGTTTCGCAAGCTGGTGTCGCGCAG CTTCACGCCGCGGCAGGTCGAGGCGGTGGAGCCCAAGGTGCGCGACTTCGTGGTCGAGCGCATCGAACGGCTGCGCGCGG CCGGCGGCGGGGACATCGTCGCCGAGCTGTTCAAACCGCTGCCGTCGATGGTCGTCGCCCACTATCTCGGTGTGCCCGAG GAAGATCGGGCACAATTCGACGGCTGGACCGAGGCCATCGTGGCGGCCAACACGGCCGACGGCGGTGTCGCCGGCGCGCT GGGCAGTGCGGGCGATGCGGTCACGTCGATGATGGCCTACTTCACCGGGCTGATCGAGCGGCGCCGGACCGACCCCGAGG ACGACACCATCTCGCATCTGGTGTCCGCCGGGGTGGGCGCCGACGGCGACATCGCCGGCACCCTGTCGGTGCTGGCCTTC ACGTTCACCATGGTCACCGGCGGCAACGACACCACCACCGGAATGCTGGGCGGGTCAATGCCTTTGCTGCACCAGCGGCC CGACCAACGGCAGCGGCTGGTCGACGAGCCGGAGCTGATCCCCGACGCCGTCGAGGAGCTGCTGCGGCTGACCTCGCCGG TGCAGGGGCTGGCCCGCACCACCACCCGGGACGTGACGATCGGCCGGACCACCATCCCGGCCGGGCGCCGGGTGCTGCTG CTGTACGGGTCGGCCAACCGCGACGAACGCCAGTACGGGCCCGACGCCGGCGAACTCGACGTCGCCCGCTGCCCGCGCAA CATCCTCACGTTCAGCCACGGCGCGCACCACTGCCTGGGCGCGGCCGCCGCGCGGATGCAGTCGCGGGTCGCGCTGACCG AGCTGCTGGCCCGCTGCCCCGACTTCGAGGTGGACGAGTCGGGCATCGTGTGGGCGGGCGGCAACTACGTCCGGCGACCG CTGTCGGTGCCGATCCGGGTGAAGTCCTGA
Upstream 100 bases:
>100_bases GTGGCTTCGCCCGCCGAGCGTCACGCCAGCGTGACGGGAGGCCACGACGGGGTTGACACAGCGCCCGTAACTGTCGTACG AATGAGACATAACATCGACT
Downstream 100 bases:
>100_bases TGCCCGGCGCGCGCAGGAGCACCGACTGGCTTTCCGGACACCGCAACGAGGCGGCCGTCGACCGGATCCTCGACGCGGCC CAGGAGCTCTACACCCAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 409; Mature: 408
Protein sequence:
>409_residues MSHNVPVAFELPNADTWADPWPMYRALRDHDPVHHVVPPKRPEHDYYVLSRHADVWAAARDHETFSSAKGLTVNYDDLEL IGLQDNPPFVMQDPPVHTEFRKLVSRSFTPRQVEAVEPKVRDFVVERIERLRAAGGGDIVAELFKPLPSMVVAHYLGVPE EDRAQFDGWTEAIVAANTADGGVAGALGSAGDAVTSMMAYFTGLIERRRTDPEDDTISHLVSAGVGADGDIAGTLSVLAF TFTMVTGGNDTTTGMLGGSMPLLHQRPDQRQRLVDEPELIPDAVEELLRLTSPVQGLARTTTRDVTIGRTTIPAGRRVLL LYGSANRDERQYGPDAGELDVARCPRNILTFSHGAHHCLGAAAARMQSRVALTELLARCPDFEVDESGIVWAGGNYVRRP LSVPIRVKS
Sequences:
>Translated_409_residues MSHNVPVAFELPNADTWADPWPMYRALRDHDPVHHVVPPKRPEHDYYVLSRHADVWAAARDHETFSSAKGLTVNYDDLEL IGLQDNPPFVMQDPPVHTEFRKLVSRSFTPRQVEAVEPKVRDFVVERIERLRAAGGGDIVAELFKPLPSMVVAHYLGVPE EDRAQFDGWTEAIVAANTADGGVAGALGSAGDAVTSMMAYFTGLIERRRTDPEDDTISHLVSAGVGADGDIAGTLSVLAF TFTMVTGGNDTTTGMLGGSMPLLHQRPDQRQRLVDEPELIPDAVEELLRLTSPVQGLARTTTRDVTIGRTTIPAGRRVLL LYGSANRDERQYGPDAGELDVARCPRNILTFSHGAHHCLGAAAARMQSRVALTELLARCPDFEVDESGIVWAGGNYVRRP LSVPIRVKS >Mature_408_residues SHNVPVAFELPNADTWADPWPMYRALRDHDPVHHVVPPKRPEHDYYVLSRHADVWAAARDHETFSSAKGLTVNYDDLELI GLQDNPPFVMQDPPVHTEFRKLVSRSFTPRQVEAVEPKVRDFVVERIERLRAAGGGDIVAELFKPLPSMVVAHYLGVPEE DRAQFDGWTEAIVAANTADGGVAGALGSAGDAVTSMMAYFTGLIERRRTDPEDDTISHLVSAGVGADGDIAGTLSVLAFT FTMVTGGNDTTTGMLGGSMPLLHQRPDQRQRLVDEPELIPDAVEELLRLTSPVQGLARTTTRDVTIGRTTIPAGRRVLLL YGSANRDERQYGPDAGELDVARCPRNILTFSHGAHHCLGAAAARMQSRVALTELLARCPDFEVDESGIVWAGGNYVRRPL SVPIRVKS
Specific function: Unknown
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 44765; Mature: 44634
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHNVPVAFELPNADTWADPWPMYRALRDHDPVHHVVPPKRPEHDYYVLSRHADVWAAAR CCCCCCEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHH DHETFSSAKGLTVNYDDLELIGLQDNPPFVMQDPPVHTEFRKLVSRSFTPRQVEAVEPKV CCHHHHCCCCCEEECCCEEEEEECCCCCEEEECCCCCHHHHHHHHCCCCCCHHHHCCHHH RDFVVERIERLRAAGGGDIVAELFKPLPSMVVAHYLGVPEEDRAQFDGWTEAIVAANTAD HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHEEECCCC GGVAGALGSAGDAVTSMMAYFTGLIERRRTDPEDDTISHLVSAGVGADGDIAGTLSVLAF CCCHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH TFTMVTGGNDTTTGMLGGSMPLLHQRPDQRQRLVDEPELIPDAVEELLRLTSPVQGLART HHHHEECCCCCCCEECCCCCCHHCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH TTRDVTIGRTTIPAGRRVLLLYGSANRDERQYGPDAGELDVARCPRNILTFSHGAHHCLG CCCCEEECCEECCCCCEEEEEECCCCCCHHHCCCCCCCCCHHHCCHHHHHHCCCHHHHHH AAAARMQSRVALTELLARCPDFEVDESGIVWAGGNYVRRPLSVPIRVKS HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHCCCCCCCEEECC >Mature Secondary Structure SHNVPVAFELPNADTWADPWPMYRALRDHDPVHHVVPPKRPEHDYYVLSRHADVWAAAR CCCCCEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHH DHETFSSAKGLTVNYDDLELIGLQDNPPFVMQDPPVHTEFRKLVSRSFTPRQVEAVEPKV CCHHHHCCCCCEEECCCEEEEEECCCCCEEEECCCCCHHHHHHHHCCCCCCHHHHCCHHH RDFVVERIERLRAAGGGDIVAELFKPLPSMVVAHYLGVPEEDRAQFDGWTEAIVAANTAD HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHEEECCCC GGVAGALGSAGDAVTSMMAYFTGLIERRRTDPEDDTISHLVSAGVGADGDIAGTLSVLAF CCCHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH TFTMVTGGNDTTTGMLGGSMPLLHQRPDQRQRLVDEPELIPDAVEELLRLTSPVQGLART HHHHEECCCCCCCEECCCCCCHHCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH TTRDVTIGRTTIPAGRRVLLLYGSANRDERQYGPDAGELDVARCPRNILTFSHGAHHCLG CCCCEEECCEECCCCCEEEEEECCCCCCHHHCCCCCCCCCHHHCCHHHHHHCCCHHHHHH AAAARMQSRVALTELLARCPDFEVDESGIVWAGGNYVRRPLSVPIRVKS HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]