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The map label for this gene is 41408617

Identifier: 41408617

GI number: 41408617

Start: 2830357

End: 2830950

Strand: Direct

Name: 41408617

Synonym: MAP2519

Alternate gene names: NA

Gene position: 2830357-2830950 (Clockwise)

Preceding gene: 41408616

Following gene: 41408620

Centisome position: 58.6

GC content: 70.2

Gene sequence:

>594_bases
ATGCCCGGCGCGCGCAGGAGCACCGACTGGCTTTCCGGACACCGCAACGAGGCGGCCGTCGACCGGATCCTCGACGCGGC
CCAGGAGCTCTACACCCAGCGCGATTCGGAATCCATCGGCATGAACGAAATCGCCAGGGCCGCAGGGTGTTCCCGCGCCA
CACTGTACCGGTACTTCGAGAACCGGGAGGCGCTGCGCACCGCGTATGTGCACCGCGAGGCCAACCGGCTGGGCCGGGCG
ATCATGGAACAGATCGACGGCATCGACGAGCCCCGCCAGCGGCTGACCGCGAGCATCACCACCACCTTGCGGATGGTCCG
CGGCAACCCCGCGCTGGCGTCGTGGTTCGCCGTCACCCGCCCGCCCATCGCCGGTGAGCTGGCCGAACACTCCGAGGTGA
TCACCGCCCTGGCCGCCGCGTTCGTCGGCTCGCTGGGCCCGGAAGAGCCCGCCGTCGTCGAGCGCCGGGCACGCTGGGTG
GTCCGGGTGATCACGTCGCTGCTGCTGTTTCCCGGACACGACGAGGCCGACGAGCGGGCGATGATCGAAGAGTTCGTCGT
CCCGATCGTGACGCCGGTGTCCGCCCGCGGCTAA

Upstream 100 bases:

>100_bases
CCCGCTGCCCCGACTTCGAGGTGGACGAGTCGGGCATCGTGTGGGCGGGCGGCAACTACGTCCGGCGACCGCTGTCGGTG
CCGATCCGGGTGAAGTCCTG

Downstream 100 bases:

>100_bases
GCCCGCAGGTCGCGGCGGGCCGGCCCGCAGCCGGTGTTCGAAGTGCCCGCCTCTGAGCGACAACCTGTTGGTGCGCTCGC
ACCCGTAACCGAGTTGTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MPGARRSTDWLSGHRNEAAVDRILDAAQELYTQRDSESIGMNEIARAAGCSRATLYRYFENREALRTAYVHREANRLGRA
IMEQIDGIDEPRQRLTASITTTLRMVRGNPALASWFAVTRPPIAGELAEHSEVITALAAAFVGSLGPEEPAVVERRARWV
VRVITSLLLFPGHDEADERAMIEEFVVPIVTPVSARG

Sequences:

>Translated_197_residues
MPGARRSTDWLSGHRNEAAVDRILDAAQELYTQRDSESIGMNEIARAAGCSRATLYRYFENREALRTAYVHREANRLGRA
IMEQIDGIDEPRQRLTASITTTLRMVRGNPALASWFAVTRPPIAGELAEHSEVITALAAAFVGSLGPEEPAVVERRARWV
VRVITSLLLFPGHDEADERAMIEEFVVPIVTPVSARG
>Mature_196_residues
PGARRSTDWLSGHRNEAAVDRILDAAQELYTQRDSESIGMNEIARAAGCSRATLYRYFENREALRTAYVHREANRLGRAI
MEQIDGIDEPRQRLTASITTTLRMVRGNPALASWFAVTRPPIAGELAEHSEVITALAAAFVGSLGPEEPAVVERRARWVV
RVITSLLLFPGHDEADERAMIEEFVVPIVTPVSARG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 21838; Mature: 21707

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGARRSTDWLSGHRNEAAVDRILDAAQELYTQRDSESIGMNEIARAAGCSRATLYRYFE
CCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHH
NREALRTAYVHREANRLGRAIMEQIDGIDEPRQRLTASITTTLRMVRGNPALASWFAVTR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC
PPIAGELAEHSEVITALAAAFVGSLGPEEPAVVERRARWVVRVITSLLLFPGHDEADERA
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
MIEEFVVPIVTPVSARG
HHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PGARRSTDWLSGHRNEAAVDRILDAAQELYTQRDSESIGMNEIARAAGCSRATLYRYFE
CCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHH
NREALRTAYVHREANRLGRAIMEQIDGIDEPRQRLTASITTTLRMVRGNPALASWFAVTR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC
PPIAGELAEHSEVITALAAAFVGSLGPEEPAVVERRARWVVRVITSLLLFPGHDEADERA
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
MIEEFVVPIVTPVSARG
HHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]