| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408599
Identifier: 41408599
GI number: 41408599
Start: 2809390
End: 2809734
Strand: Direct
Name: 41408599
Synonym: MAP2501
Alternate gene names: NA
Gene position: 2809390-2809734 (Clockwise)
Preceding gene: 41408598
Following gene: 41408600
Centisome position: 58.17
GC content: 71.01
Gene sequence:
>345_bases GTGGCAACAATGTTCTCGCGCCGCATCATCACCGTGCTCACCACCGCCGCCGCCATCGGGCTCGCCGCCGTCGGACTGGC CGGACCCGCCGCCGCCCGCACCGTGCAGACCGGCGATGAGATGTTCCTCGCCCAGATGCGAAGCCTCGGCGTCTCTTTCC CGTCGCCGCAGGAGGCCGTGCGGGAGGGCCATCAGGTATGCGCTGAACTGTCCGCCGGCAAGACCCCGACCGCCGTCACC GTCGCCGTCTTCCGGCAGACCAACCTGACTCCTCCGCAGGCGGCCGGCCTGGTCACCGCCGCGACACAGGCCTACTGCCC GCAATTCTCCGGCCAGCCCGGCTAG
Upstream 100 bases:
>100_bases ACGCATCGATAAGCAATCGCGTTCGGTACCAAGAAGTTATTGAGAAGTTTCCAAGGAACAAACGCGACGCTGGGATCGTC CTACTCGATAACTGAAAGGG
Downstream 100 bases:
>100_bases GAGCCTGCTGAATTAATTCCGCGTGGCGGGACGAGTTGTCCTGGGGTTTTGGGGATGATTGTTGGGTGCAGGGTCGCTCT GATGATCAGCGTGAGTTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MATMFSRRIITVLTTAAAIGLAAVGLAGPAAARTVQTGDEMFLAQMRSLGVSFPSPQEAVREGHQVCAELSAGKTPTAVT VAVFRQTNLTPPQAAGLVTAATQAYCPQFSGQPG
Sequences:
>Translated_114_residues MATMFSRRIITVLTTAAAIGLAAVGLAGPAAARTVQTGDEMFLAQMRSLGVSFPSPQEAVREGHQVCAELSAGKTPTAVT VAVFRQTNLTPPQAAGLVTAATQAYCPQFSGQPG >Mature_113_residues ATMFSRRIITVLTTAAAIGLAAVGLAGPAAARTVQTGDEMFLAQMRSLGVSFPSPQEAVREGHQVCAELSAGKTPTAVTV AVFRQTNLTPPQAAGLVTAATQAYCPQFSGQPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv1291c [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007969 [H]
Pfam domain/function: PF05305 DUF732 [H]
EC number: NA
Molecular weight: Translated: 11663; Mature: 11531
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATMFSRRIITVLTTAAAIGLAAVGLAGPAAARTVQTGDEMFLAQMRSLGVSFPSPQEAV CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHH REGHQVCAELSAGKTPTAVTVAVFRQTNLTPPQAAGLVTAATQAYCPQFSGQPG HHHHHHHHHHHCCCCCCHHHHEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure ATMFSRRIITVLTTAAAIGLAAVGLAGPAAARTVQTGDEMFLAQMRSLGVSFPSPQEAV CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHH REGHQVCAELSAGKTPTAVTVAVFRQTNLTPPQAAGLVTAATQAYCPQFSGQPG HHHHHHHHHHHCCCCCCHHHHEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]