Click here to switch to the map view.

The map label for this gene is 41408600

Identifier: 41408600

GI number: 41408600

Start: 2809770

End: 2811443

Strand: Direct

Name: 41408600

Synonym: MAP2502

Alternate gene names: NA

Gene position: 2809770-2811443 (Clockwise)

Preceding gene: 41408599

Following gene: 41408601

Centisome position: 58.18

GC content: 65.41

Gene sequence:

>1674_bases
TTGTCCTGGGGTTTTGGGGATGATTGTTGGGTGCAGGGTCGCTCTGATGATCAGCGTGAGTTGTTGGATGCGGAGTCGGT
TGCCGGGCATCTTCTGAAGGCCGACAGCATGTTTGCGTTCCTGGCGGCGCACCGCAGCCAGTTGTTTCCCGAGGAGATGT
TCGCGGACTTGTTCCCGTCGCAGCGGGGCCGGCCCAGCGTGCCGGCTGAGGTGATGGCCTCGGTGATCACCTTGCAGGCC
CTGCACGGTTTTTCGGATAACGAGACCGTGGATGCGGTGACTTTCGATCTGCGCTGGAAAGCAGCGTGCGGGTTGCCGAT
CACGGCGGGCGCGTTTCATTCGACGACGTTGACGTATTGGCGGCGTCGGTTGGCGGCTTCGGATCGGCCCAACCGGATCT
TCGAGGCGGTCAAGACGGTGGTGGCCGAGACCGGGGTGTTGGCGGGCAAGACACGGCGGGCCTTGGATTCCACGGTGCTC
GACGATGCGGTGGCCACGCAGGACACCGTGACGCAGTTGATCGCCGCGATCCGACGAGTGCGCCGCGAAGTCCCTGGCGC
TGCAGCGGTGATCGAAGCCCACTGCAGCGCCCATGATTACGACGATCCGGGGAAACCCGCGATTGCGTGGGAGGATAAGG
CCGCTCGGGATCGGCTGGTGGATGGTTTGGTCGGTGATGCTCACCGGGTGCTGGGCTATCTGCCTGACCAGGAACTCGCG
CCGCGGGCTGCTGAGGCGGTGGCGTTGTTGGCGTTGATCGCCGGTCAAGACGTTGAACCGGTCGAGGGCTCTGATGGCAC
CGACGGGCACTGGCGCATCGCGCAGCAGGTCAGTGGGGATCGCGTGATCTCCACCGTCGATGCCGACACGCGGCACGCTC
ACAAGACGGTGCACCGCCGCCAGGACGGCTTCAAAGCCCACCTTGCCGTCGAGCCCGACACCGGAATCATCACCGATTGC
GCGTTGACCAAGGCCAGCGGCGCGGACAACCACGAGGCCGTCGTCGGGCTGAGCCTGCTCGAGGGTGAACACACCCCCGG
TGCGGGTCCTGGGCGATTCGGCGTATGGCACCGGGGCCGCCCGGGCGGCACTGGCCGACGCCGGCCATGTCGCGGTGATC
AAACCGCTACCGCTACGCCCGCCGGTTCCGGGTGGCTTCACCAGCGACGATTTCCTCATCGATTTCGACGCCCGCATCGT
GACCTGCCCGGCTGGACACGGAATGCCGATCCGTCCCAGTGGCGGAGTCACCTTCGAAAGATACTGTCGCTCATGCCCGT
TGGCGTCCCGGTGCACGACCGCCACGCGCGGACGCAAACTCACCCTTCATATCCACGAGCAATTATTGCGCGCTGCTCGC
GTCGCGGCCCGCGACCCCGATTGGCAAGCCGAATACCGCCAACACCGGCCCATGGTGGAACGCTCAATGGCCTGGCTCAC
TCGCGGCAACCGCAAGGTCCGCTACCGAGGAACCGCCAAAAACAACCATTGGCTGCACCACCGCGCCGCAGCACTGAACC
TACGTCGGCTGCTCACCATGGGCCTGACCCGCACCGACACCACCTGGGCCATCGCCTAACACGCCCTCACACCAAGGCCT
TGCCTCAGCCGCCGACCGCTGCCACGCTCAACAACGGCGGGGCGATCTCTTTTCTGTCGACCCACAGGGTCTGA

Upstream 100 bases:

>100_bases
CGGCCGGCCTGGTCACCGCCGCGACACAGGCCTACTGCCCGCAATTCTCCGGCCAGCCCGGCTAGGAGCCTGCTGAATTA
ATTCCGCGTGGCGGGACGAG

Downstream 100 bases:

>100_bases
CTACAACACGCCGCTAGACGGTTCGAGACGCCCCGCCCCAAAAAATCCCCTAATTCAGCAGGCTCCTAGCCGGTCGCGCG
CGGGCCCTTCGGATTCGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: IS4 Family Transposase; Transposase; IS Transposase

Number of amino acids: Translated: 557; Mature: 556

Protein sequence:

>557_residues
MSWGFGDDCWVQGRSDDQRELLDAESVAGHLLKADSMFAFLAAHRSQLFPEEMFADLFPSQRGRPSVPAEVMASVITLQA
LHGFSDNETVDAVTFDLRWKAACGLPITAGAFHSTTLTYWRRRLAASDRPNRIFEAVKTVVAETGVLAGKTRRALDSTVL
DDAVATQDTVTQLIAAIRRVRREVPGAAAVIEAHCSAHDYDDPGKPAIAWEDKAARDRLVDGLVGDAHRVLGYLPDQELA
PRAAEAVALLALIAGQDVEPVEGSDGTDGHWRIAQQVSGDRVISTVDADTRHAHKTVHRRQDGFKAHLAVEPDTGIITDC
ALTKASGADNHEAVVGLSLLEGEHTPGAGPGRFGVWHRGRPGGTGRRRPCRGDQTATATPAGSGWLHQRRFPHRFRRPHR
DLPGWTRNADPSQWRSHLRKILSLMPVGVPVHDRHARTQTHPSYPRAIIARCSRRGPRPRLASRIPPTPAHGGTLNGLAH
SRQPQGPLPRNRQKQPLAAPPRRSTEPTSAAHHGPDPHRHHLGHRLTRPHTKALPQPPTAATLNNGGAISFLSTHRV

Sequences:

>Translated_557_residues
MSWGFGDDCWVQGRSDDQRELLDAESVAGHLLKADSMFAFLAAHRSQLFPEEMFADLFPSQRGRPSVPAEVMASVITLQA
LHGFSDNETVDAVTFDLRWKAACGLPITAGAFHSTTLTYWRRRLAASDRPNRIFEAVKTVVAETGVLAGKTRRALDSTVL
DDAVATQDTVTQLIAAIRRVRREVPGAAAVIEAHCSAHDYDDPGKPAIAWEDKAARDRLVDGLVGDAHRVLGYLPDQELA
PRAAEAVALLALIAGQDVEPVEGSDGTDGHWRIAQQVSGDRVISTVDADTRHAHKTVHRRQDGFKAHLAVEPDTGIITDC
ALTKASGADNHEAVVGLSLLEGEHTPGAGPGRFGVWHRGRPGGTGRRRPCRGDQTATATPAGSGWLHQRRFPHRFRRPHR
DLPGWTRNADPSQWRSHLRKILSLMPVGVPVHDRHARTQTHPSYPRAIIARCSRRGPRPRLASRIPPTPAHGGTLNGLAH
SRQPQGPLPRNRQKQPLAAPPRRSTEPTSAAHHGPDPHRHHLGHRLTRPHTKALPQPPTAATLNNGGAISFLSTHRV
>Mature_556_residues
SWGFGDDCWVQGRSDDQRELLDAESVAGHLLKADSMFAFLAAHRSQLFPEEMFADLFPSQRGRPSVPAEVMASVITLQAL
HGFSDNETVDAVTFDLRWKAACGLPITAGAFHSTTLTYWRRRLAASDRPNRIFEAVKTVVAETGVLAGKTRRALDSTVLD
DAVATQDTVTQLIAAIRRVRREVPGAAAVIEAHCSAHDYDDPGKPAIAWEDKAARDRLVDGLVGDAHRVLGYLPDQELAP
RAAEAVALLALIAGQDVEPVEGSDGTDGHWRIAQQVSGDRVISTVDADTRHAHKTVHRRQDGFKAHLAVEPDTGIITDCA
LTKASGADNHEAVVGLSLLEGEHTPGAGPGRFGVWHRGRPGGTGRRRPCRGDQTATATPAGSGWLHQRRFPHRFRRPHRD
LPGWTRNADPSQWRSHLRKILSLMPVGVPVHDRHARTQTHPSYPRAIIARCSRRGPRPRLASRIPPTPAHGGTLNGLAHS
RQPQGPLPRNRQKQPLAAPPRRSTEPTSAAHHGPDPHRHHLGHRLTRPHTKALPQPPTAATLNNGGAISFLSTHRV

Specific function: Unknown

COG id: COG3666

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60743; Mature: 60612

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWGFGDDCWVQGRSDDQRELLDAESVAGHLLKADSMFAFLAAHRSQLFPEEMFADLFPS
CCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC
QRGRPSVPAEVMASVITLQALHGFSDNETVDAVTFDLRWKAACGLPITAGAFHSTTLTYW
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEECCCCCCCCCHHHHHHHHH
RRRLAASDRPNRIFEAVKTVVAETGVLAGKTRRALDSTVLDDAVATQDTVTQLIAAIRRV
HHHHHCCCCHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RREVPGAAAVIEAHCSAHDYDDPGKPAIAWEDKAARDRLVDGLVGDAHRVLGYLPDQELA
HHHCCCHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHC
PRAAEAVALLALIAGQDVEPVEGSDGTDGHWRIAQQVSGDRVISTVDADTRHAHKTVHRR
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHCCCCCEEEECCCHHHHHHHHHHHH
QDGFKAHLAVEPDTGIITDCALTKASGADNHEAVVGLSLLEGEHTPGAGPGRFGVWHRGR
CCCCEEEEEECCCCCCEEHHHHHCCCCCCCCCCEEEEHHHCCCCCCCCCCCCCCCCCCCC
PGGTGRRRPCRGDQTATATPAGSGWLHQRRFPHRFRRPHRDLPGWTRNADPSQWRSHLRK
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHH
ILSLMPVGVPVHDRHARTQTHPSYPRAIIARCSRRGPRPRLASRIPPTPAHGGTLNGLAH
HHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCHHC
SRQPQGPLPRNRQKQPLAAPPRRSTEPTSAAHHGPDPHRHHLGHRLTRPHTKALPQPPTA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHCCCCCCCC
ATLNNGGAISFLSTHRV
EEECCCCEEEEECCCCC
>Mature Secondary Structure 
SWGFGDDCWVQGRSDDQRELLDAESVAGHLLKADSMFAFLAAHRSQLFPEEMFADLFPS
CCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC
QRGRPSVPAEVMASVITLQALHGFSDNETVDAVTFDLRWKAACGLPITAGAFHSTTLTYW
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEECCCCCCCCCHHHHHHHHH
RRRLAASDRPNRIFEAVKTVVAETGVLAGKTRRALDSTVLDDAVATQDTVTQLIAAIRRV
HHHHHCCCCHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RREVPGAAAVIEAHCSAHDYDDPGKPAIAWEDKAARDRLVDGLVGDAHRVLGYLPDQELA
HHHCCCHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHC
PRAAEAVALLALIAGQDVEPVEGSDGTDGHWRIAQQVSGDRVISTVDADTRHAHKTVHRR
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHCCCCCEEEECCCHHHHHHHHHHHH
QDGFKAHLAVEPDTGIITDCALTKASGADNHEAVVGLSLLEGEHTPGAGPGRFGVWHRGR
CCCCEEEEEECCCCCCEEHHHHHCCCCCCCCCCEEEEHHHCCCCCCCCCCCCCCCCCCCC
PGGTGRRRPCRGDQTATATPAGSGWLHQRRFPHRFRRPHRDLPGWTRNADPSQWRSHLRK
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHH
ILSLMPVGVPVHDRHARTQTHPSYPRAIIARCSRRGPRPRLASRIPPTPAHGGTLNGLAH
HHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCHHC
SRQPQGPLPRNRQKQPLAAPPRRSTEPTSAAHHGPDPHRHHLGHRLTRPHTKALPQPPTA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHCCCCCCCC
ATLNNGGAISFLSTHRV
EEECCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA