| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408594
Identifier: 41408594
GI number: 41408594
Start: 2803786
End: 2804262
Strand: Direct
Name: 41408594
Synonym: MAP2496
Alternate gene names: NA
Gene position: 2803786-2804262 (Clockwise)
Preceding gene: 41408593
Following gene: 41408597
Centisome position: 58.05
GC content: 71.91
Gene sequence:
>477_bases ATGCGGCACGCGAAGTCGGACTACCCCGACGGCGTCGCCGACCATGATCGGCCGCTGGCGCCGCGCGGCATCCGGCAGGC CGGCCTGGCCGGCGACTGGCTGCGCGCCGGCGCGCCCGCCATCGATGCCGTGCTGTGCTCCACCGCGACGCGCACCCGGG AGACGCTGCGCAACACCCGCATCGAGGCGCCGGTGCGATATAGCGAGCGGCTCTACGCCAGCACCCCGGGCATCGTCATC GACGAGATCAACACGGTGGGCGACGACGTCAGCACGCTGCTCGTCATCGGACACGAGCCGACGATGTCGGCCCTTGCGCT CGGCCTGGGCGGCGGCAGTGGCGCCAATCCCGCTGCGGCCGAACGCATCTCGAACAAGTTTCCGACGTCGGCGATCGCGG TGCTCGCGGTGCCGTGCCGGTGGACGGAGCTGGAACTCGGGGCGGCGACGCTGACCGACTTCGTCGTTGCGCGCTGA
Upstream 100 bases:
>100_bases GGCGAACAAGAAGCCGACCAGGGTGACGACCACGCGGCCTGATCGACCCTGCCGCCGTCTAATCTGATTGGCCGTGACCG GCCGACGCACCCTGCTGTTG
Downstream 100 bases:
>100_bases GGCTCATCGGCCGAGCCAAGGTGAAGCTAGGAATTGGTCGCCAGCGTCAGCTCCATCAGCTTGATGGCCTGGCCGCAGGC GTCGATGCCGGGCGCCTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MRHAKSDYPDGVADHDRPLAPRGIRQAGLAGDWLRAGAPAIDAVLCSTATRTRETLRNTRIEAPVRYSERLYASTPGIVI DEINTVGDDVSTLLVIGHEPTMSALALGLGGGSGANPAAAERISNKFPTSAIAVLAVPCRWTELELGAATLTDFVVAR
Sequences:
>Translated_158_residues MRHAKSDYPDGVADHDRPLAPRGIRQAGLAGDWLRAGAPAIDAVLCSTATRTRETLRNTRIEAPVRYSERLYASTPGIVI DEINTVGDDVSTLLVIGHEPTMSALALGLGGGSGANPAAAERISNKFPTSAIAVLAVPCRWTELELGAATLTDFVVAR >Mature_158_residues MRHAKSDYPDGVADHDRPLAPRGIRQAGLAGDWLRAGAPAIDAVLCSTATRTRETLRNTRIEAPVRYSERLYASTPGIVI DEINTVGDDVSTLLVIGHEPTMSALALGLGGGSGANPAAAERISNKFPTSAIAVLAVPCRWTELELGAATLTDFVVAR
Specific function: Unknown
COG id: COG2062
COG function: function code T; Phosphohistidine phosphatase SixA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sixA phosphatase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: NA
Molecular weight: Translated: 16646; Mature: 16646
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHAKSDYPDGVADHDRPLAPRGIRQAGLAGDWLRAGAPAIDAVLCSTATRTRETLRNTR CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCC IEAPVRYSERLYASTPGIVIDEINTVGDDVSTLLVIGHEPTMSALALGLGGGSGANPAAA CCCCCCHHHHHHCCCCCEEEECCCCCCCCCEEEEEECCCCCHHHHEEECCCCCCCCHHHH ERISNKFPTSAIAVLAVPCRWTELELGAATLTDFVVAR HHHHCCCCCCEEEEEECCCCCCEEECCHHHHHHHHHCC >Mature Secondary Structure MRHAKSDYPDGVADHDRPLAPRGIRQAGLAGDWLRAGAPAIDAVLCSTATRTRETLRNTR CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCC IEAPVRYSERLYASTPGIVIDEINTVGDDVSTLLVIGHEPTMSALALGLGGGSGANPAAA CCCCCCHHHHHHCCCCCEEEECCCCCCCCCEEEEEECCCCCHHHHEEECCCCCCCCHHHH ERISNKFPTSAIAVLAVPCRWTELELGAATLTDFVVAR HHHHCCCCCCEEEEEECCCCCCEEECCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]