Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41408593

Identifier: 41408593

GI number: 41408593

Start: 2802309

End: 2803727

Strand: Direct

Name: 41408593

Synonym: MAP2495

Alternate gene names: NA

Gene position: 2802309-2803727 (Clockwise)

Preceding gene: 41408589

Following gene: 41408594

Centisome position: 58.02

GC content: 68.57

Gene sequence:

>1419_bases
ATGAGTTCGGGCGGCATCATCGATCGGGACGCGATCAGCGCGGCCTTCGATGCGCTCGATGCCGCGCTCGACGGCGTGGC
GGCGCTCGGTTTCGACGGCTTGACCCCGCGGGAATGCCTGGCGCTATTGGGGCGCTGCGAAAAAGCCCGCCGGCGCCTGC
CCGTCGCCGAACACCAGCTGATCAACGCGCTGGCCCGCGACGCCACCCCGGCGGAGTTGGGGGGCCGGCTTTCGCATGCG
ATCGCCGAGGCCACGCTGATCAGCCGCGCCGAGGCCGCCCGGCGGGTGCACACCGCCGCTGATTTGGGCCCCCGCGTCGG
GTTGACCGGCGAACCGTTGCCACCGTTGCTGGCGGCCACCGCCGCGCGGCAACGGGAGGGGTCGTTGGGTCTCGAGCAGG
TGGCGGTGATCCGTAAGTTCTGCCACCAGTTGCCGGGCTGGATCGACCAGGCAACCCGGGAACGCGCCGAAGCCGACCTG
GCCAGGGAAGCCACCCGGTATCGGCCCGAACAGCTCGCCGCGTTGGCGGGCACGCTGGCCGATTGCCTCAACCCCGACGG
CCTCTACCGCGACGAAGACCGCGCCCGCCGCCGCAGCCTCACCCTGGGCAACCAACAGGCCGACGGCATGTCCGAACTCC
GCGGCTGGCTATCCCCCGAGCTGCGCGCCACCCTCGAGGCGGTGCTGGCCAAACTCGCCGCCCCCGGCATGTGCAACCCA
CTCGATGAGAGTCCGTGCGTGGAAGGCACTCCGAGTCAACACGCCATCGACGGTGATGCCCGCTCGGCGGCCCAGCGCAA
CCACGATGGGCTGCTGGCCGGGCTGCGCGCCCTGCTCGCCTCAGGAAACCTCGGCCAACACAACGGGCTCCCGGCCTCCA
TCATCGTCACCACCACCCTGGCCGACCTCGAAACCGCCGCCGGACGGCGTCTGACCGGCGGCGGCACCCTGCTACCCATG
TCCGATGTGATCCGGCTATCCCGGCACGCCCACCACTACCTCGCGATTTTCGACCAGGGCAAAGCCCTGGCCCTGTATCA
CACCAAACGCCTGGCCTCACCCGCACAGCGCATCGTGTTATACGCCAAAGACCGCGGCTGCACCGCCCCCGGCTGCACCA
TCCCCGGCTACTACAGCGAAGTGCATCACTGCACCGACTACGCCACCTGCCACACCACCGACATCAACGATCTGACCTTC
GCCTGCGGACCCCACCACCGCCTGCTACAACCCGGCGCCTGGACCACCCACAAAAACGCCAAAGGGGAAACCGAATGGAT
TCCACCACCCCACCTAGACCGAAACCAACCCCGCACCAACACCTTCCACCACCCCGAAAAACTCCTACAGGGTGAGGACG
ACGACGGCGAAGTTGACGGCGAACAAGAAGCCGACCAGGGTGACGACCACGCGGCCTGA

Upstream 100 bases:

>100_bases
GGCACGCTCGGGGGCGCCCGACTAAATCTCTTATGTCACTTTCGTTTCTGTGGTCACATTGCGGGGTTTTCTGTCGGTGG
GCTGCCCTAGTTTCGGGGGC

Downstream 100 bases:

>100_bases
TCGACCCTGCCGCCGTCTAATCTGATTGGCCGTGACCGGCCGACGCACCCTGCTGTTGATGCGGCACGCGAAGTCGGACT
ACCCCGACGGCGTCGCCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 472; Mature: 471

Protein sequence:

>472_residues
MSSGGIIDRDAISAAFDALDAALDGVAALGFDGLTPRECLALLGRCEKARRRLPVAEHQLINALARDATPAELGGRLSHA
IAEATLISRAEAARRVHTAADLGPRVGLTGEPLPPLLAATAARQREGSLGLEQVAVIRKFCHQLPGWIDQATRERAEADL
AREATRYRPEQLAALAGTLADCLNPDGLYRDEDRARRRSLTLGNQQADGMSELRGWLSPELRATLEAVLAKLAAPGMCNP
LDESPCVEGTPSQHAIDGDARSAAQRNHDGLLAGLRALLASGNLGQHNGLPASIIVTTTLADLETAAGRRLTGGGTLLPM
SDVIRLSRHAHHYLAIFDQGKALALYHTKRLASPAQRIVLYAKDRGCTAPGCTIPGYYSEVHHCTDYATCHTTDINDLTF
ACGPHHRLLQPGAWTTHKNAKGETEWIPPPHLDRNQPRTNTFHHPEKLLQGEDDDGEVDGEQEADQGDDHAA

Sequences:

>Translated_472_residues
MSSGGIIDRDAISAAFDALDAALDGVAALGFDGLTPRECLALLGRCEKARRRLPVAEHQLINALARDATPAELGGRLSHA
IAEATLISRAEAARRVHTAADLGPRVGLTGEPLPPLLAATAARQREGSLGLEQVAVIRKFCHQLPGWIDQATRERAEADL
AREATRYRPEQLAALAGTLADCLNPDGLYRDEDRARRRSLTLGNQQADGMSELRGWLSPELRATLEAVLAKLAAPGMCNP
LDESPCVEGTPSQHAIDGDARSAAQRNHDGLLAGLRALLASGNLGQHNGLPASIIVTTTLADLETAAGRRLTGGGTLLPM
SDVIRLSRHAHHYLAIFDQGKALALYHTKRLASPAQRIVLYAKDRGCTAPGCTIPGYYSEVHHCTDYATCHTTDINDLTF
ACGPHHRLLQPGAWTTHKNAKGETEWIPPPHLDRNQPRTNTFHHPEKLLQGEDDDGEVDGEQEADQGDDHAA
>Mature_471_residues
SSGGIIDRDAISAAFDALDAALDGVAALGFDGLTPRECLALLGRCEKARRRLPVAEHQLINALARDATPAELGGRLSHAI
AEATLISRAEAARRVHTAADLGPRVGLTGEPLPPLLAATAARQREGSLGLEQVAVIRKFCHQLPGWIDQATRERAEADLA
REATRYRPEQLAALAGTLADCLNPDGLYRDEDRARRRSLTLGNQQADGMSELRGWLSPELRATLEAVLAKLAAPGMCNPL
DESPCVEGTPSQHAIDGDARSAAQRNHDGLLAGLRALLASGNLGQHNGLPASIIVTTTLADLETAAGRRLTGGGTLLPMS
DVIRLSRHAHHYLAIFDQGKALALYHTKRLASPAQRIVLYAKDRGCTAPGCTIPGYYSEVHHCTDYATCHTTDINDLTFA
CGPHHRLLQPGAWTTHKNAKGETEWIPPPHLDRNQPRTNTFHHPEKLLQGEDDDGEVDGEQEADQGDDHAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Rv1128c/1148c/1588c/1702c/1945/3466 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003870
- InterPro:   IPR003615 [H]

Pfam domain/function: PF02720 DUF222 [H]

EC number: NA

Molecular weight: Translated: 50679; Mature: 50548

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSGGIIDRDAISAAFDALDAALDGVAALGFDGLTPRECLALLGRCEKARRRLPVAEHQL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHH
INALARDATPAELGGRLSHAIAEATLISRAEAARRVHTAADLGPRVGLTGEPLPPLLAAT
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
AARQREGSLGLEQVAVIRKFCHQLPGWIDQATRERAEADLAREATRYRPEQLAALAGTLA
HHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
DCLNPDGLYRDEDRARRRSLTLGNQQADGMSELRGWLSPELRATLEAVLAKLAAPGMCNP
HHCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCC
LDESPCVEGTPSQHAIDGDARSAAQRNHDGLLAGLRALLASGNLGQHNGLPASIIVTTTL
CCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHH
ADLETAAGRRLTGGGTLLPMSDVIRLSRHAHHYLAIFDQGKALALYHTKRLASPAQRIVL
HHHHHHCCCEECCCCCCCCHHHHHHHHHHCCEEEEEECCCCEEEEEHHHHHCCHHHEEEE
YAKDRGCTAPGCTIPGYYSEVHHCTDYATCHTTDINDLTFACGPHHRLLQPGAWTTHKNA
EECCCCCCCCCCCCCCHHHHHHHHHCCCEEECCCCCCCEEECCCCHHHCCCCCCCCCCCC
KGETEWIPPPHLDRNQPRTNTFHHPEKLLQGEDDDGEVDGEQEADQGDDHAA
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SSGGIIDRDAISAAFDALDAALDGVAALGFDGLTPRECLALLGRCEKARRRLPVAEHQL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHH
INALARDATPAELGGRLSHAIAEATLISRAEAARRVHTAADLGPRVGLTGEPLPPLLAAT
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
AARQREGSLGLEQVAVIRKFCHQLPGWIDQATRERAEADLAREATRYRPEQLAALAGTLA
HHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
DCLNPDGLYRDEDRARRRSLTLGNQQADGMSELRGWLSPELRATLEAVLAKLAAPGMCNP
HHCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCC
LDESPCVEGTPSQHAIDGDARSAAQRNHDGLLAGLRALLASGNLGQHNGLPASIIVTTTL
CCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHH
ADLETAAGRRLTGGGTLLPMSDVIRLSRHAHHYLAIFDQGKALALYHTKRLASPAQRIVL
HHHHHHCCCEECCCCCCCCHHHHHHHHHHCCEEEEEECCCCEEEEEHHHHHCCHHHEEEE
YAKDRGCTAPGCTIPGYYSEVHHCTDYATCHTTDINDLTFACGPHHRLLQPGAWTTHKNA
EECCCCCCCCCCCCCCHHHHHHHHHCCCEEECCCCCCCEEECCCCHHHCCCCCCCCCCCC
KGETEWIPPPHLDRNQPRTNTFHHPEKLLQGEDDDGEVDGEQEADQGDDHAA
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]