| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408593
Identifier: 41408593
GI number: 41408593
Start: 2802309
End: 2803727
Strand: Direct
Name: 41408593
Synonym: MAP2495
Alternate gene names: NA
Gene position: 2802309-2803727 (Clockwise)
Preceding gene: 41408589
Following gene: 41408594
Centisome position: 58.02
GC content: 68.57
Gene sequence:
>1419_bases ATGAGTTCGGGCGGCATCATCGATCGGGACGCGATCAGCGCGGCCTTCGATGCGCTCGATGCCGCGCTCGACGGCGTGGC GGCGCTCGGTTTCGACGGCTTGACCCCGCGGGAATGCCTGGCGCTATTGGGGCGCTGCGAAAAAGCCCGCCGGCGCCTGC CCGTCGCCGAACACCAGCTGATCAACGCGCTGGCCCGCGACGCCACCCCGGCGGAGTTGGGGGGCCGGCTTTCGCATGCG ATCGCCGAGGCCACGCTGATCAGCCGCGCCGAGGCCGCCCGGCGGGTGCACACCGCCGCTGATTTGGGCCCCCGCGTCGG GTTGACCGGCGAACCGTTGCCACCGTTGCTGGCGGCCACCGCCGCGCGGCAACGGGAGGGGTCGTTGGGTCTCGAGCAGG TGGCGGTGATCCGTAAGTTCTGCCACCAGTTGCCGGGCTGGATCGACCAGGCAACCCGGGAACGCGCCGAAGCCGACCTG GCCAGGGAAGCCACCCGGTATCGGCCCGAACAGCTCGCCGCGTTGGCGGGCACGCTGGCCGATTGCCTCAACCCCGACGG CCTCTACCGCGACGAAGACCGCGCCCGCCGCCGCAGCCTCACCCTGGGCAACCAACAGGCCGACGGCATGTCCGAACTCC GCGGCTGGCTATCCCCCGAGCTGCGCGCCACCCTCGAGGCGGTGCTGGCCAAACTCGCCGCCCCCGGCATGTGCAACCCA CTCGATGAGAGTCCGTGCGTGGAAGGCACTCCGAGTCAACACGCCATCGACGGTGATGCCCGCTCGGCGGCCCAGCGCAA CCACGATGGGCTGCTGGCCGGGCTGCGCGCCCTGCTCGCCTCAGGAAACCTCGGCCAACACAACGGGCTCCCGGCCTCCA TCATCGTCACCACCACCCTGGCCGACCTCGAAACCGCCGCCGGACGGCGTCTGACCGGCGGCGGCACCCTGCTACCCATG TCCGATGTGATCCGGCTATCCCGGCACGCCCACCACTACCTCGCGATTTTCGACCAGGGCAAAGCCCTGGCCCTGTATCA CACCAAACGCCTGGCCTCACCCGCACAGCGCATCGTGTTATACGCCAAAGACCGCGGCTGCACCGCCCCCGGCTGCACCA TCCCCGGCTACTACAGCGAAGTGCATCACTGCACCGACTACGCCACCTGCCACACCACCGACATCAACGATCTGACCTTC GCCTGCGGACCCCACCACCGCCTGCTACAACCCGGCGCCTGGACCACCCACAAAAACGCCAAAGGGGAAACCGAATGGAT TCCACCACCCCACCTAGACCGAAACCAACCCCGCACCAACACCTTCCACCACCCCGAAAAACTCCTACAGGGTGAGGACG ACGACGGCGAAGTTGACGGCGAACAAGAAGCCGACCAGGGTGACGACCACGCGGCCTGA
Upstream 100 bases:
>100_bases GGCACGCTCGGGGGCGCCCGACTAAATCTCTTATGTCACTTTCGTTTCTGTGGTCACATTGCGGGGTTTTCTGTCGGTGG GCTGCCCTAGTTTCGGGGGC
Downstream 100 bases:
>100_bases TCGACCCTGCCGCCGTCTAATCTGATTGGCCGTGACCGGCCGACGCACCCTGCTGTTGATGCGGCACGCGAAGTCGGACT ACCCCGACGGCGTCGCCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 472; Mature: 471
Protein sequence:
>472_residues MSSGGIIDRDAISAAFDALDAALDGVAALGFDGLTPRECLALLGRCEKARRRLPVAEHQLINALARDATPAELGGRLSHA IAEATLISRAEAARRVHTAADLGPRVGLTGEPLPPLLAATAARQREGSLGLEQVAVIRKFCHQLPGWIDQATRERAEADL AREATRYRPEQLAALAGTLADCLNPDGLYRDEDRARRRSLTLGNQQADGMSELRGWLSPELRATLEAVLAKLAAPGMCNP LDESPCVEGTPSQHAIDGDARSAAQRNHDGLLAGLRALLASGNLGQHNGLPASIIVTTTLADLETAAGRRLTGGGTLLPM SDVIRLSRHAHHYLAIFDQGKALALYHTKRLASPAQRIVLYAKDRGCTAPGCTIPGYYSEVHHCTDYATCHTTDINDLTF ACGPHHRLLQPGAWTTHKNAKGETEWIPPPHLDRNQPRTNTFHHPEKLLQGEDDDGEVDGEQEADQGDDHAA
Sequences:
>Translated_472_residues MSSGGIIDRDAISAAFDALDAALDGVAALGFDGLTPRECLALLGRCEKARRRLPVAEHQLINALARDATPAELGGRLSHA IAEATLISRAEAARRVHTAADLGPRVGLTGEPLPPLLAATAARQREGSLGLEQVAVIRKFCHQLPGWIDQATRERAEADL AREATRYRPEQLAALAGTLADCLNPDGLYRDEDRARRRSLTLGNQQADGMSELRGWLSPELRATLEAVLAKLAAPGMCNP LDESPCVEGTPSQHAIDGDARSAAQRNHDGLLAGLRALLASGNLGQHNGLPASIIVTTTLADLETAAGRRLTGGGTLLPM SDVIRLSRHAHHYLAIFDQGKALALYHTKRLASPAQRIVLYAKDRGCTAPGCTIPGYYSEVHHCTDYATCHTTDINDLTF ACGPHHRLLQPGAWTTHKNAKGETEWIPPPHLDRNQPRTNTFHHPEKLLQGEDDDGEVDGEQEADQGDDHAA >Mature_471_residues SSGGIIDRDAISAAFDALDAALDGVAALGFDGLTPRECLALLGRCEKARRRLPVAEHQLINALARDATPAELGGRLSHAI AEATLISRAEAARRVHTAADLGPRVGLTGEPLPPLLAATAARQREGSLGLEQVAVIRKFCHQLPGWIDQATRERAEADLA REATRYRPEQLAALAGTLADCLNPDGLYRDEDRARRRSLTLGNQQADGMSELRGWLSPELRATLEAVLAKLAAPGMCNPL DESPCVEGTPSQHAIDGDARSAAQRNHDGLLAGLRALLASGNLGQHNGLPASIIVTTTLADLETAAGRRLTGGGTLLPMS DVIRLSRHAHHYLAIFDQGKALALYHTKRLASPAQRIVLYAKDRGCTAPGCTIPGYYSEVHHCTDYATCHTTDINDLTFA CGPHHRLLQPGAWTTHKNAKGETEWIPPPHLDRNQPRTNTFHHPEKLLQGEDDDGEVDGEQEADQGDDHAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Rv1128c/1148c/1588c/1702c/1945/3466 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003870 - InterPro: IPR003615 [H]
Pfam domain/function: PF02720 DUF222 [H]
EC number: NA
Molecular weight: Translated: 50679; Mature: 50548
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSGGIIDRDAISAAFDALDAALDGVAALGFDGLTPRECLALLGRCEKARRRLPVAEHQL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHH INALARDATPAELGGRLSHAIAEATLISRAEAARRVHTAADLGPRVGLTGEPLPPLLAAT HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH AARQREGSLGLEQVAVIRKFCHQLPGWIDQATRERAEADLAREATRYRPEQLAALAGTLA HHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH DCLNPDGLYRDEDRARRRSLTLGNQQADGMSELRGWLSPELRATLEAVLAKLAAPGMCNP HHCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCC LDESPCVEGTPSQHAIDGDARSAAQRNHDGLLAGLRALLASGNLGQHNGLPASIIVTTTL CCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHH ADLETAAGRRLTGGGTLLPMSDVIRLSRHAHHYLAIFDQGKALALYHTKRLASPAQRIVL HHHHHHCCCEECCCCCCCCHHHHHHHHHHCCEEEEEECCCCEEEEEHHHHHCCHHHEEEE YAKDRGCTAPGCTIPGYYSEVHHCTDYATCHTTDINDLTFACGPHHRLLQPGAWTTHKNA EECCCCCCCCCCCCCCHHHHHHHHHCCCEEECCCCCCCEEECCCCHHHCCCCCCCCCCCC KGETEWIPPPHLDRNQPRTNTFHHPEKLLQGEDDDGEVDGEQEADQGDDHAA CCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SSGGIIDRDAISAAFDALDAALDGVAALGFDGLTPRECLALLGRCEKARRRLPVAEHQL CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHH INALARDATPAELGGRLSHAIAEATLISRAEAARRVHTAADLGPRVGLTGEPLPPLLAAT HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH AARQREGSLGLEQVAVIRKFCHQLPGWIDQATRERAEADLAREATRYRPEQLAALAGTLA HHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH DCLNPDGLYRDEDRARRRSLTLGNQQADGMSELRGWLSPELRATLEAVLAKLAAPGMCNP HHCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCC LDESPCVEGTPSQHAIDGDARSAAQRNHDGLLAGLRALLASGNLGQHNGLPASIIVTTTL CCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHH ADLETAAGRRLTGGGTLLPMSDVIRLSRHAHHYLAIFDQGKALALYHTKRLASPAQRIVL HHHHHHCCCEECCCCCCCCHHHHHHHHHHCCEEEEEECCCCEEEEEHHHHHCCHHHEEEE YAKDRGCTAPGCTIPGYYSEVHHCTDYATCHTTDINDLTFACGPHHRLLQPGAWTTHKNA EECCCCCCCCCCCCCCHHHHHHHHHCCCEEECCCCCCCEEECCCCHHHCCCCCCCCCCCC KGETEWIPPPHLDRNQPRTNTFHHPEKLLQGEDDDGEVDGEQEADQGDDHAA CCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]