| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408574
Identifier: 41408574
GI number: 41408574
Start: 2780795
End: 2781283
Strand: Direct
Name: 41408574
Synonym: MAP2476
Alternate gene names: NA
Gene position: 2780795-2781283 (Clockwise)
Preceding gene: 41408573
Following gene: 41408576
Centisome position: 57.58
GC content: 65.64
Gene sequence:
>489_bases CTGAACGGCCGAGCCGTTGCGCGGCAACGGGATTGCCACCACCGAACGCTCGCCTTGCTGACGGCGCCGCTCGACGGGCA TGAATGCGTTTGCGCCGTTTGCGCCGTTCCGCGCGCAACCCGGCGTCATAGCCCGCATACTGAGCCGGTTGCACCCCACC GAAAGAAGGAGCCACGCATCATGTCTGTTTGCGGGCTACGCATGTTATGCATTCCGGCCGTCGTTGCTGCGGCATTGACC GTAGGTAGCGGGATCGCCGTCGCCGACGACGACGGGTACCTCGCCCAACTGAAGAAGATCGGCGTCGCCTGGCAGCCGGG CGGCGACACCACGCTGATTCAGCTGGGCCACGCAATCTGCTCCGACCGCGCCGCGGGCAAAACCCCGGACGAGCTGGCCG CCGATGTGCATTCCGGCCTGAACAGTTCCTTCAACTACGCAGACGCCACGGCCATCGTCAGCGCCGCGGAATCCAACTAC TGCCCCTGA
Upstream 100 bases:
>100_bases CCGACCACTACGACCATGTCCACATCGCCACCGACGGCGGCGGTTACCCGAGCGGGCACGAGACCTATTACATCGCGTCG ATGACCCCGACGCCGCCGGA
Downstream 100 bases:
>100_bases TCCGTCACGGGCGCGCCGGTTGATTCCGGGCGCAACAGGAACAGGCCGTACGCGGCGATCGACTGCGCGTCGGCGATGAC GCCCGTCCGGATCATCTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MNGRAVARQRDCHHRTLALLTAPLDGHECVCAVCAVPRATRRHSPHTEPVAPHRKKEPRIMSVCGLRMLCIPAVVAAALT VGSGIAVADDDGYLAQLKKIGVAWQPGGDTTLIQLGHAICSDRAAGKTPDELAADVHSGLNSSFNYADATAIVSAAESNY CP
Sequences:
>Translated_162_residues MNGRAVARQRDCHHRTLALLTAPLDGHECVCAVCAVPRATRRHSPHTEPVAPHRKKEPRIMSVCGLRMLCIPAVVAAALT VGSGIAVADDDGYLAQLKKIGVAWQPGGDTTLIQLGHAICSDRAAGKTPDELAADVHSGLNSSFNYADATAIVSAAESNY CP >Mature_162_residues MNGRAVARQRDCHHRTLALLTAPLDGHECVCAVCAVPRATRRHSPHTEPVAPHRKKEPRIMSVCGLRMLCIPAVVAAALT VGSGIAVADDDGYLAQLKKIGVAWQPGGDTTLIQLGHAICSDRAAGKTPDELAADVHSGLNSSFNYADATAIVSAAESNY CP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17031; Mature: 17031
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGRAVARQRDCHHRTLALLTAPLDGHECVCAVCAVPRATRRHSPHTEPVAPHRKKEPRI CCCCCCCHHHHHHHHEEHEEECCCCCHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCHH MSVCGLRMLCIPAVVAAALTVGSGIAVADDDGYLAQLKKIGVAWQPGGDTTLIQLGHAIC HHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCEECCCCCCHHHHHHHHHH SDRAAGKTPDELAADVHSGLNSSFNYADATAIVSAAESNYCP CCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure MNGRAVARQRDCHHRTLALLTAPLDGHECVCAVCAVPRATRRHSPHTEPVAPHRKKEPRI CCCCCCCHHHHHHHHEEHEEECCCCCHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCHH MSVCGLRMLCIPAVVAAALTVGSGIAVADDDGYLAQLKKIGVAWQPGGDTTLIQLGHAIC HHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCEECCCCCCHHHHHHHHHH SDRAAGKTPDELAADVHSGLNSSFNYADATAIVSAAESNYCP CCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA