| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408573
Identifier: 41408573
GI number: 41408573
Start: 2780097
End: 2780798
Strand: Direct
Name: 41408573
Synonym: MAP2475
Alternate gene names: NA
Gene position: 2780097-2780798 (Clockwise)
Preceding gene: 41408571
Following gene: 41408574
Centisome position: 57.56
GC content: 70.66
Gene sequence:
>702_bases GTGGGCGTGCGGGTGGTCACGAAGGGCGCCGGCCGATGGCTGGCGGTCGCGGCCTCCCTCGTCATCTCCGCCGCCATGAT CCACGCCCAGGGCACCAAGCCGCGCTGCTGCCCCGCGCCGCCGGCGGCGGCGCCCACCCCCAACGCCACCGCCTCCAGCG CCGCCGCGAACCCCCCGCCGGCCGGCGCACCGCGCACCGCCAGTCCTGCCGAGGTGGAATCGCTGACGGCCCTGGCACCA CCCGCCCCGTCCGCGGGGCAGCAATTCCAGCTCGCACTGCCGCACAGCGTGGGCTCCGAGGACCGGCTGCAAGTCAAGAC CATCTGGGCGGCCCGCGCCATCAGCGTGCTGTTCCCCCAGATCACGACCATCTACGGGTATCGGGAAGACCCGTTGCCGT GGCACCCCAACGGGCTGGCGATCGACGTGATGATCCCGAACTACCACACCCCCGAAGGCATCGAGCTCGGCAACCAGATC GCCGGCTACGCCCTGGCGAACGCCAAACGCTGGGGAATCAATCACGTGATCTGGCGGCAGAAGATCTATCCGGGCGTCGG CGGGGGCAACTGGATGGCGGACCTGGGCTCCGAAACCGCCGACCACTACGACCATGTCCACATCGCCACCGACGGCGGCG GTTACCCGAGCGGGCACGAGACCTATTACATCGCGTCGATGACCCCGACGCCGCCGGACTGA
Upstream 100 bases:
>100_bases TGTGACTCGCCGGACGGCGCCGAGGGGCGTTTTGGCCCGACCGGGGCGTGCTGTCGAAAAATGAGCCACAGGCGTCACAG GCGGCGTTAAGCTGCTGGTC
Downstream 100 bases:
>100_bases ACGGCCGAGCCGTTGCGCGGCAACGGGATTGCCACCACCGAACGCTCGCCTTGCTGACGGCGCCGCTCGACGGGCATGAA TGCGTTTGCGCCGTTTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MGVRVVTKGAGRWLAVAASLVISAAMIHAQGTKPRCCPAPPAAAPTPNATASSAAANPPPAGAPRTASPAEVESLTALAP PAPSAGQQFQLALPHSVGSEDRLQVKTIWAARAISVLFPQITTIYGYREDPLPWHPNGLAIDVMIPNYHTPEGIELGNQI AGYALANAKRWGINHVIWRQKIYPGVGGGNWMADLGSETADHYDHVHIATDGGGYPSGHETYYIASMTPTPPD
Sequences:
>Translated_233_residues MGVRVVTKGAGRWLAVAASLVISAAMIHAQGTKPRCCPAPPAAAPTPNATASSAAANPPPAGAPRTASPAEVESLTALAP PAPSAGQQFQLALPHSVGSEDRLQVKTIWAARAISVLFPQITTIYGYREDPLPWHPNGLAIDVMIPNYHTPEGIELGNQI AGYALANAKRWGINHVIWRQKIYPGVGGGNWMADLGSETADHYDHVHIATDGGGYPSGHETYYIASMTPTPPD >Mature_232_residues GVRVVTKGAGRWLAVAASLVISAAMIHAQGTKPRCCPAPPAAAPTPNATASSAAANPPPAGAPRTASPAEVESLTALAPP APSAGQQFQLALPHSVGSEDRLQVKTIWAARAISVLFPQITTIYGYREDPLPWHPNGLAIDVMIPNYHTPEGIELGNQIA GYALANAKRWGINHVIWRQKIYPGVGGGNWMADLGSETADHYDHVHIATDGGGYPSGHETYYIASMTPTPPD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24449; Mature: 24318
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVRVVTKGAGRWLAVAASLVISAAMIHAQGTKPRCCPAPPAAAPTPNATASSAAANPPP CCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AGAPRTASPAEVESLTALAPPAPSAGQQFQLALPHSVGSEDRLQVKTIWAARAISVLFPQ CCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHH ITTIYGYREDPLPWHPNGLAIDVMIPNYHTPEGIELGNQIAGYALANAKRWGINHVIWRQ HHHEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHCEEECCCCCCCCHHEEEHH KIYPGVGGGNWMADLGSETADHYDHVHIATDGGGYPSGHETYYIASMTPTPPD HHCCCCCCCCHHHHHCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCC >Mature Secondary Structure GVRVVTKGAGRWLAVAASLVISAAMIHAQGTKPRCCPAPPAAAPTPNATASSAAANPPP CEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AGAPRTASPAEVESLTALAPPAPSAGQQFQLALPHSVGSEDRLQVKTIWAARAISVLFPQ CCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHH ITTIYGYREDPLPWHPNGLAIDVMIPNYHTPEGIELGNQIAGYALANAKRWGINHVIWRQ HHHEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHCEEECCCCCCCCHHEEEHH KIYPGVGGGNWMADLGSETADHYDHVHIATDGGGYPSGHETYYIASMTPTPPD HHCCCCCCCCHHHHHCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA