| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is fadD19_2
Identifier: 41408478
GI number: 41408478
Start: 2674275
End: 2675927
Strand: Direct
Name: fadD19_2
Synonym: MAP2380
Alternate gene names: 41408478
Gene position: 2674275-2675927 (Clockwise)
Preceding gene: 41408477
Following gene: 41408479
Centisome position: 55.37
GC content: 68.48
Gene sequence:
>1653_bases ATGTCCGACACCACAACAGCATTCACGGTACCGGCGGTCGCGAAGGCCGTCGCGGCCGCGATCCCCGACCGCGAGCTGAT CATCCAGGGCGACCGTCGCTACACCTACCGGCAGGTGATCGAACGGTCGAACCGGCTCGCCGCGTATCTGCACTCCCGAG GTCTGGGATGCCACACCGAGCGCGAGGCGCTGGCCGGCCACGAGGTGGGCCAGGACCTGCTCGGCCTCTACGCGTACAAC GGAAGCGAATTCGTCGAAGCGCTGCTGGGCGCCTTCGCTGCGCGCGTCGCCCCGTTCAACGTCAACTTCCGCTACGTCAA AAGCGAACTGCACTACCTGCTCGCGGACTCCGAGGCGACCGCGCTGATCTACCACGCGGCGTTCGCGCCCCGGGTGGCCG AGATCCTGCCCGAGCTGCCGCGGCTACGGGTGCTTATCCAGATCGCCGACGAGTCGGGCAACGAATTACTCGACGGCGCA GTGGATTACGAGGACGCGCTGGCGTCGGTGTCCGCGGAGCCACCACCGGTGCGGCACTGTCCGGACGACCTGTACGTGCT GTACACCGGCGGCACCACGGGAATGCCCAAGGGCGTGTTGTGGCGTCAGCACGACATCTTCATGACGTCCTTCGGGGGGC GCAACCTGATGACCGGCGAGCCCTCGTCGTCGATCGACGAGATCGTGCAGCGCGCCGCGTCTGGCCCGGGGACCAAGCTG ATGATCCTGCCGCCGCTGATCCACGGCGCGGCCCAGTGGAGCGTGATGACGGCGATCACGACCGGCCAGACGGTCGTCTT CCCCACTGTCGTCGACCATTTGGACGCCGAGGACGTGGTGCGCACCATCGAGCGGGAAAAGGTCATGGTGGTGACGGTGG TGGGTGACGCGATGGCCCGCCCGTTGGTCGCGGCCATCGAGAAGGGGATCGCCGACGTGTCGTCGCTGGCCGTGGTGGCC AACGGCGGCGCGTTGCTGACCCCGTTCGTCAAGCAGCGCTTGATCGAAGTACTGCCGAACGCGGTGGTCGTCGACGGCGT CGGGTCGTCGGAGACCGGGGCGCAGATGCACCACATGTCGACGCCCGGGGCGGTGGCGACCGGCACCTTCAACGCCGGCC CGGACACCTTCGTGGCGGCCGAGGACCTGTCGGCGATCCTGCCGCCCGGGCACGAGGGGATGGGCTGGTTGGCCCAGCGC GGCTATGTCCCGCTCGGGTACAAGGGCGATGCCGCCAAGACCGCCAAGACCTTTCCGGTCATCGACGGGGTGCGCTACGC GGTGCCGGGCGACCGGGCACGCCACCACGCCGACGGCCATATCGAGCTGCTGGGCCGCGACTCCGTGTGCATCAATTCCG GCGGCGAGAAGATTTTCGTCGAGGAGGTCGAGACGGCCATCGCGTCGCATCCCGCGGTGGCCGACGTGGTGGTGGCCGGA CGGCCGAGTGAACGGTGGGGCCAGGAAGTCGTCGCCGTGGTCGCGCTGTCCGACGGCGCCGCCGTCGACGCCGGAGAATT GATCGCCCACGCATCGAATTCGCTGGCGCGCTACAAGCTTCCCAAGGCGATCGTGTTCCGTCCGGTGATCGAGCGCAGCC CGTCGGGCAAGGCCGATTACCGGTGGGCGCGCGAGCAGGCGGTGAACGGATGA
Upstream 100 bases:
>100_bases CTTCATCTCCGCTAGCATGACGGCGGCCGACGGCACGCTGCTCAGTGAGGCCACCGGCCTGATGGTCCGCCTGCTACCCC ACCAGCCGTGAGAGGCGAAA
Downstream 100 bases:
>100_bases AACCCGCTGGGGCCGAGTGCTTTTAGGCTAGGAGCACACCGATGAAGTACCAAGGGCGGGTCGTGGTGGTCACAGGCGCC GGCTCGGGCATCGGCCGGGC
Product: acyl-CoA synthetase
Products: (2,3-Dihydroxybenzoyl)adenylate; Diphosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 550; Mature: 549
Protein sequence:
>550_residues MSDTTTAFTVPAVAKAVAAAIPDRELIIQGDRRYTYRQVIERSNRLAAYLHSRGLGCHTEREALAGHEVGQDLLGLYAYN GSEFVEALLGAFAARVAPFNVNFRYVKSELHYLLADSEATALIYHAAFAPRVAEILPELPRLRVLIQIADESGNELLDGA VDYEDALASVSAEPPPVRHCPDDLYVLYTGGTTGMPKGVLWRQHDIFMTSFGGRNLMTGEPSSSIDEIVQRAASGPGTKL MILPPLIHGAAQWSVMTAITTGQTVVFPTVVDHLDAEDVVRTIEREKVMVVTVVGDAMARPLVAAIEKGIADVSSLAVVA NGGALLTPFVKQRLIEVLPNAVVVDGVGSSETGAQMHHMSTPGAVATGTFNAGPDTFVAAEDLSAILPPGHEGMGWLAQR GYVPLGYKGDAAKTAKTFPVIDGVRYAVPGDRARHHADGHIELLGRDSVCINSGGEKIFVEEVETAIASHPAVADVVVAG RPSERWGQEVVAVVALSDGAAVDAGELIAHASNSLARYKLPKAIVFRPVIERSPSGKADYRWAREQAVNG
Sequences:
>Translated_550_residues MSDTTTAFTVPAVAKAVAAAIPDRELIIQGDRRYTYRQVIERSNRLAAYLHSRGLGCHTEREALAGHEVGQDLLGLYAYN GSEFVEALLGAFAARVAPFNVNFRYVKSELHYLLADSEATALIYHAAFAPRVAEILPELPRLRVLIQIADESGNELLDGA VDYEDALASVSAEPPPVRHCPDDLYVLYTGGTTGMPKGVLWRQHDIFMTSFGGRNLMTGEPSSSIDEIVQRAASGPGTKL MILPPLIHGAAQWSVMTAITTGQTVVFPTVVDHLDAEDVVRTIEREKVMVVTVVGDAMARPLVAAIEKGIADVSSLAVVA NGGALLTPFVKQRLIEVLPNAVVVDGVGSSETGAQMHHMSTPGAVATGTFNAGPDTFVAAEDLSAILPPGHEGMGWLAQR GYVPLGYKGDAAKTAKTFPVIDGVRYAVPGDRARHHADGHIELLGRDSVCINSGGEKIFVEEVETAIASHPAVADVVVAG RPSERWGQEVVAVVALSDGAAVDAGELIAHASNSLARYKLPKAIVFRPVIERSPSGKADYRWAREQAVNG >Mature_549_residues SDTTTAFTVPAVAKAVAAAIPDRELIIQGDRRYTYRQVIERSNRLAAYLHSRGLGCHTEREALAGHEVGQDLLGLYAYNG SEFVEALLGAFAARVAPFNVNFRYVKSELHYLLADSEATALIYHAAFAPRVAEILPELPRLRVLIQIADESGNELLDGAV DYEDALASVSAEPPPVRHCPDDLYVLYTGGTTGMPKGVLWRQHDIFMTSFGGRNLMTGEPSSSIDEIVQRAASGPGTKLM ILPPLIHGAAQWSVMTAITTGQTVVFPTVVDHLDAEDVVRTIEREKVMVVTVVGDAMARPLVAAIEKGIADVSSLAVVAN GGALLTPFVKQRLIEVLPNAVVVDGVGSSETGAQMHHMSTPGAVATGTFNAGPDTFVAAEDLSAILPPGHEGMGWLAQRG YVPLGYKGDAAKTAKTFPVIDGVRYAVPGDRARHHADGHIELLGRDSVCINSGGEKIFVEEVETAIASHPAVADVVVAGR PSERWGQEVVAVVALSDGAAVDAGELIAHASNSLARYKLPKAIVFRPVIERSPSGKADYRWAREQAVNG
Specific function: Activates The Carboxylate Group Of 2,3-Dihydroxy- Benzoate (2,3-Dhb), Via ATP-Dependent Ppi Exchange Reactions, To The Acyladenylate. Then, Catalyzes The Acylation Of Holo-Entb With 2,3-Dhb Adenylate, Preparing That Molecule For Amide Bond Formation With
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family [H]
Homologues:
Organism=Homo sapiens, GI156151445, Length=595, Percent_Identity=25.2100840336134, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI38505220, Length=454, Percent_Identity=25.3303964757709, Blast_Score=103, Evalue=4e-22, Organism=Homo sapiens, GI187761345, Length=567, Percent_Identity=25.5731922398589, Blast_Score=98, Evalue=2e-20, Organism=Homo sapiens, GI187761343, Length=567, Percent_Identity=25.5731922398589, Blast_Score=98, Evalue=2e-20, Organism=Homo sapiens, GI115511026, Length=462, Percent_Identity=26.6233766233766, Blast_Score=97, Evalue=5e-20, Organism=Homo sapiens, GI122937307, Length=465, Percent_Identity=25.1612903225806, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI157311624, Length=480, Percent_Identity=25, Blast_Score=79, Evalue=2e-14, Organism=Homo sapiens, GI157311622, Length=480, Percent_Identity=25, Blast_Score=79, Evalue=2e-14, Organism=Homo sapiens, GI58082049, Length=480, Percent_Identity=24.5833333333333, Blast_Score=75, Evalue=2e-13, Organism=Escherichia coli, GI1786810, Length=534, Percent_Identity=25.8426966292135, Blast_Score=89, Evalue=6e-19, Organism=Escherichia coli, GI1788107, Length=547, Percent_Identity=25.0457038391225, Blast_Score=86, Evalue=6e-18, Organism=Escherichia coli, GI145693145, Length=373, Percent_Identity=27.8820375335121, Blast_Score=82, Evalue=6e-17, Organism=Caenorhabditis elegans, GI17560308, Length=563, Percent_Identity=25.5772646536412, Blast_Score=112, Evalue=5e-25, Organism=Caenorhabditis elegans, GI17531443, Length=481, Percent_Identity=25.5717255717256, Blast_Score=108, Evalue=7e-24, Organism=Caenorhabditis elegans, GI17557194, Length=488, Percent_Identity=23.155737704918, Blast_Score=68, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6319699, Length=505, Percent_Identity=24.950495049505, Blast_Score=94, Evalue=6e-20, Organism=Drosophila melanogaster, GI24581924, Length=547, Percent_Identity=26.8738574040219, Blast_Score=125, Evalue=7e-29, Organism=Drosophila melanogaster, GI18859661, Length=528, Percent_Identity=24.4318181818182, Blast_Score=87, Evalue=3e-17, Organism=Drosophila melanogaster, GI21355181, Length=493, Percent_Identity=22.5152129817444, Blast_Score=76, Evalue=6e-14, Organism=Drosophila melanogaster, GI45552801, Length=204, Percent_Identity=30.8823529411765, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI45550496, Length=204, Percent_Identity=30.8823529411765, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI281364798, Length=510, Percent_Identity=23.921568627451, Blast_Score=66, Evalue=5e-11, Organism=Drosophila melanogaster, GI24583465, Length=510, Percent_Identity=23.921568627451, Blast_Score=66, Evalue=5e-11, Organism=Drosophila melanogaster, GI24583463, Length=510, Percent_Identity=23.921568627451, Blast_Score=66, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020845 - InterPro: IPR000873 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: 2.7.7.58; 2.3.1.- [C]
Molecular weight: Translated: 58584; Mature: 58453
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTTTAFTVPAVAKAVAAAIPDRELIIQGDRRYTYRQVIERSNRLAAYLHSRGLGCHTE CCCCCCEEEHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCHHEEHHHHCCCCCCCH REALAGHEVGQDLLGLYAYNGSEFVEALLGAFAARVAPFNVNFRYVKSELHYLLADSEAT HHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEEECCCCE ALIYHAAFAPRVAEILPELPRLRVLIQIADESGNELLDGAVDYEDALASVSAEPPPVRHC EEEEEHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHCCCCCHHHHHHHCCCCCCCCCCC PDDLYVLYTGGTTGMPKGVLWRQHDIFMTSFGGRNLMTGEPSSSIDEIVQRAASGPGTKL CCCEEEEEECCCCCCCCCCEEEECEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCEE MILPPLIHGAAQWSVMTAITTGQTVVFPTVVDHLDAEDVVRTIEREKVMVVTVVGDAMAR EEECCHHCCCHHHEEEEEEECCCEEEEHHHHHHCCHHHHHHHHCCCCEEEEEEECCHHHH PLVAAIEKGIADVSSLAVVANGGALLTPFVKQRLIEVLPNAVVVDGVGSSETGAQMHHMS HHHHHHHHHHHHHHHEEEEECCCEEECHHHHHHHHHHCCCEEEEECCCCCCCCCCEEECC TPGAVATGTFNAGPDTFVAAEDLSAILPPGHEGMGWLAQRGYVPLGYKGDAAKTAKTFPV CCCCEEECCCCCCCCCEEEHHHHHHHCCCCCCCCCHHHHCCEEECCCCCCCCCCCCCCCC IDGVRYAVPGDRARHHADGHIELLGRDSVCINSGGEKIFVEEVETAIASHPAVADVVVAG CCCEEEECCCCHHCCCCCCEEEEEECCCEEEECCCCEEEHHHHHHHHHCCCCCEEEEEEC RPSERWGQEVVAVVALSDGAAVDAGELIAHASNSLARYKLPKAIVFRPVIERSPSGKADY CCCHHHHHEEEEEEEECCCCCCCHHHHHHHHCCCHHHHCCCHHHHHHHHHHCCCCCCCCH RWAREQAVNG HHHHHHCCCC >Mature Secondary Structure SDTTTAFTVPAVAKAVAAAIPDRELIIQGDRRYTYRQVIERSNRLAAYLHSRGLGCHTE CCCCCEEEHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCHHEEHHHHCCCCCCCH REALAGHEVGQDLLGLYAYNGSEFVEALLGAFAARVAPFNVNFRYVKSELHYLLADSEAT HHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEEECCCCE ALIYHAAFAPRVAEILPELPRLRVLIQIADESGNELLDGAVDYEDALASVSAEPPPVRHC EEEEEHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHCCCCCHHHHHHHCCCCCCCCCCC PDDLYVLYTGGTTGMPKGVLWRQHDIFMTSFGGRNLMTGEPSSSIDEIVQRAASGPGTKL CCCEEEEEECCCCCCCCCCEEEECEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCEE MILPPLIHGAAQWSVMTAITTGQTVVFPTVVDHLDAEDVVRTIEREKVMVVTVVGDAMAR EEECCHHCCCHHHEEEEEEECCCEEEEHHHHHHCCHHHHHHHHCCCCEEEEEEECCHHHH PLVAAIEKGIADVSSLAVVANGGALLTPFVKQRLIEVLPNAVVVDGVGSSETGAQMHHMS HHHHHHHHHHHHHHHEEEEECCCEEECHHHHHHHHHHCCCEEEEECCCCCCCCCCEEECC TPGAVATGTFNAGPDTFVAAEDLSAILPPGHEGMGWLAQRGYVPLGYKGDAAKTAKTFPV CCCCEEECCCCCCCCCEEEHHHHHHHCCCCCCCCCHHHHCCEEECCCCCCCCCCCCCCCC IDGVRYAVPGDRARHHADGHIELLGRDSVCINSGGEKIFVEEVETAIASHPAVADVVVAG CCCEEEECCCCHHCCCCCCEEEEEECCCEEEECCCCEEEHHHHHHHHHCCCCCEEEEEEC RPSERWGQEVVAVVALSDGAAVDAGELIAHASNSLARYKLPKAIVFRPVIERSPSGKADY CCCHHHHHEEEEEEEECCCCCCCHHHHHHHHCCCHHHHCCCHHHHHHHHHHCCCCCCCCH RWAREQAVNG HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2,3-Dihydroxybenzoate; ATP [C]
Specific reaction: 2,3-Dihydroxybenzoate + ATP <==> (2,3-Dihydroxybenzoyl)adenylate + Diphosphate [C]
General reaction: Ligases; Forming Carbon-Sulfur Bonds; Acid-Thiol Ligases [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9387222; 9384377 [H]