| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is yjiB [H]
Identifier: 41408463
GI number: 41408463
Start: 2658155
End: 2659387
Strand: Direct
Name: yjiB [H]
Synonym: MAP2365
Alternate gene names: 41408463
Gene position: 2658155-2659387 (Clockwise)
Preceding gene: 41408459
Following gene: 41408464
Centisome position: 55.04
GC content: 66.02
Gene sequence:
>1233_bases ATGCCGCTGAGCACTGGCCCGACCGGTCAACCCGTCGTACCGACGCTCGACTTCACCGGCGAGACCAGCCCGTACCCGTT CTTCGAACACATGCGGCGCACCGACCCGGTCTGGCACGGCTCGCTGGCCGACGCCAGCCAGCTGCCCGAGGAACTGCGCC CCGAGGACGAGTGGGTGCTGTTCGACTACGAGAGCGTGTCGCAGGCCTTCCGCGACGACCGGATCTTCAGCTCGCACAAG TACGACGAGACCATCGGCCTGGTGATGGGCCACACCATCCTCGCGATGGGCGGCCGGGAACACCACGACCACCGCAACTT GGTGGCCAAGGCCTTTCGCGCCACCGCGCTGGAGCGCTGGGAGCCGTCGGTCATCGGGCCGGTCTGCGAGCAACTGGTCG ACGAGATCAAGAACGACGGCCACGCCGATTTGGTGAAGGCGGTGACATTCGAGTTCCCCACGCGGATCATCTCGACGCTG CTCGGTCTGCCCGCCGAGGATCTCGACCTGTTCCGCCGGCTGTCGCTGGACCTGATCTCCATCCCCACCGACATCGAGGC CGGCCTGAACGCCGCGACCGAGCTTTACGACTACTTCCTCAAACAGGTCGAGCAGCGCCGGCGCAAACCCACCGACGACA TCATCGGCGACCTGGTGGCCGCGGAGATCGACGGCGAAAAGCTCACCGATGAGGCCATCATCGCGTTCCTGCGGTTGCTG CTGCCCGGCGGGCTGGAGACCACCTACCGCTCCTCGGGCAACCTGCTGTACCTGTTGCTGACCCACCCCGAGCAGTTGGC GATGGTCTATCGGGACCGGTCGTTGATACCGATGGCGATCGAGGAGGGCCTGCGGTTCGAGACACCGCTGACCATGGTCA CTCGGACCACCACCGAGGAGGTCGAAATCGGCGGCAAGACCATCCCGGCCAACGCCCAGATCGACATGTGCATGGGCTCG GCCAATCGCGACGAGACCCGCTGGACCGATCCCAACGCCTTCGACATCCGCCGGCCCCGCCAGGCCCACATCGCCTTCGC CGGGGGCATCCACATGTGCCTGGGCATGCATTTGGCGCGACTGGAAACCCGGGTGATGTTGAACAGCCTGTTCGACCGGG TGCGGGATTTGGCGTTCGTGCCCGACGACGGAACCGGCGAGGAGTCCAAGATCGTCGGGCTCACCTTCCGCTCCCCCAAC AAGCTTCCCGTCACGTTCGCGCCCGCCGCATGA
Upstream 100 bases:
>100_bases TTGCTATTTATACTATGATAGCGATATTCCGCTCGGTACCGACCCGCCGTGGACCCGCGCGCGGCCCGCGCCACCGGTCC GTTTTCGCGTAAGGAGCGCT
Downstream 100 bases:
>100_bases AAAGCCGGGCAGCGATCCTGCATGACGTCGGCGGCCCTTGGTCGGTCGAGGAGTTCGAGCTGGACCCGCCGCGCGCCGGG GAGGTCCTGGTGCAGATGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 410; Mature: 409
Protein sequence:
>410_residues MPLSTGPTGQPVVPTLDFTGETSPYPFFEHMRRTDPVWHGSLADASQLPEELRPEDEWVLFDYESVSQAFRDDRIFSSHK YDETIGLVMGHTILAMGGREHHDHRNLVAKAFRATALERWEPSVIGPVCEQLVDEIKNDGHADLVKAVTFEFPTRIISTL LGLPAEDLDLFRRLSLDLISIPTDIEAGLNAATELYDYFLKQVEQRRRKPTDDIIGDLVAAEIDGEKLTDEAIIAFLRLL LPGGLETTYRSSGNLLYLLLTHPEQLAMVYRDRSLIPMAIEEGLRFETPLTMVTRTTTEEVEIGGKTIPANAQIDMCMGS ANRDETRWTDPNAFDIRRPRQAHIAFAGGIHMCLGMHLARLETRVMLNSLFDRVRDLAFVPDDGTGEESKIVGLTFRSPN KLPVTFAPAA
Sequences:
>Translated_410_residues MPLSTGPTGQPVVPTLDFTGETSPYPFFEHMRRTDPVWHGSLADASQLPEELRPEDEWVLFDYESVSQAFRDDRIFSSHK YDETIGLVMGHTILAMGGREHHDHRNLVAKAFRATALERWEPSVIGPVCEQLVDEIKNDGHADLVKAVTFEFPTRIISTL LGLPAEDLDLFRRLSLDLISIPTDIEAGLNAATELYDYFLKQVEQRRRKPTDDIIGDLVAAEIDGEKLTDEAIIAFLRLL LPGGLETTYRSSGNLLYLLLTHPEQLAMVYRDRSLIPMAIEEGLRFETPLTMVTRTTTEEVEIGGKTIPANAQIDMCMGS ANRDETRWTDPNAFDIRRPRQAHIAFAGGIHMCLGMHLARLETRVMLNSLFDRVRDLAFVPDDGTGEESKIVGLTFRSPN KLPVTFAPAA >Mature_409_residues PLSTGPTGQPVVPTLDFTGETSPYPFFEHMRRTDPVWHGSLADASQLPEELRPEDEWVLFDYESVSQAFRDDRIFSSHKY DETIGLVMGHTILAMGGREHHDHRNLVAKAFRATALERWEPSVIGPVCEQLVDEIKNDGHADLVKAVTFEFPTRIISTLL GLPAEDLDLFRRLSLDLISIPTDIEAGLNAATELYDYFLKQVEQRRRKPTDDIIGDLVAAEIDGEKLTDEAIIAFLRLLL PGGLETTYRSSGNLLYLLLTHPEQLAMVYRDRSLIPMAIEEGLRFETPLTMVTRTTTEEVEIGGKTIPANAQIDMCMGSA NRDETRWTDPNAFDIRRPRQAHIAFAGGIHMCLGMHLARLETRVMLNSLFDRVRDLAFVPDDGTGEESKIVGLTFRSPNK LPVTFAPAA
Specific function: Unknown
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 45972; Mature: 45841
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLSTGPTGQPVVPTLDFTGETSPYPFFEHMRRTDPVWHGSLADASQLPEELRPEDEWVL CCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCHHHCHHHHCCCCCEEE FDYESVSQAFRDDRIFSSHKYDETIGLVMGHTILAMGGREHHDHRNLVAKAFRATALERW EEHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHC EPSVIGPVCEQLVDEIKNDGHADLVKAVTFEFPTRIISTLLGLPAEDLDLFRRLSLDLIS CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHEE IPTDIEAGLNAATELYDYFLKQVEQRRRKPTDDIIGDLVAAEIDGEKLTDEAIIAFLRLL CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH LPGGLETTYRSSGNLLYLLLTHPEQLAMVYRDRSLIPMAIEEGLRFETPLTMVTRTTTEE CCCCCCHHEECCCCEEEEEEECCHHHHHHHHCCCCCHHHHHCCCCCCCCEEEEEECCHHH VEIGGKTIPANAQIDMCMGSANRDETRWTDPNAFDIRRPRQAHIAFAGGIHMCLGMHLAR HHCCCEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHEEEEHHHHHHHHHHHHHH LETRVMLNSLFDRVRDLAFVPDDGTGEESKIVGLTFRSPNKLPVTFAPAA HHHHHHHHHHHHHHHHEEECCCCCCCCCCEEEEEEECCCCCCCEEECCCC >Mature Secondary Structure PLSTGPTGQPVVPTLDFTGETSPYPFFEHMRRTDPVWHGSLADASQLPEELRPEDEWVL CCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCHHHCHHHHCCCCCEEE FDYESVSQAFRDDRIFSSHKYDETIGLVMGHTILAMGGREHHDHRNLVAKAFRATALERW EEHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHC EPSVIGPVCEQLVDEIKNDGHADLVKAVTFEFPTRIISTLLGLPAEDLDLFRRLSLDLIS CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHEE IPTDIEAGLNAATELYDYFLKQVEQRRRKPTDDIIGDLVAAEIDGEKLTDEAIIAFLRLL CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH LPGGLETTYRSSGNLLYLLLTHPEQLAMVYRDRSLIPMAIEEGLRFETPLTMVTRTTTEE CCCCCCHHEECCCCEEEEEEECCHHHHHHHHCCCCCHHHHHCCCCCCCCEEEEEECCHHH VEIGGKTIPANAQIDMCMGSANRDETRWTDPNAFDIRRPRQAHIAFAGGIHMCLGMHLAR HHCCCEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHEEEEHHHHHHHHHHHHHH LETRVMLNSLFDRVRDLAFVPDDGTGEESKIVGLTFRSPNKLPVTFAPAA HHHHHHHHHHHHHHHHEEECCCCCCCCCCEEEEEEECCCCCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]