| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408452
Identifier: 41408452
GI number: 41408452
Start: 2645469
End: 2646299
Strand: Direct
Name: 41408452
Synonym: MAP2354
Alternate gene names: NA
Gene position: 2645469-2646299 (Clockwise)
Preceding gene: 41408451
Following gene: 41408453
Centisome position: 54.77
GC content: 69.43
Gene sequence:
>831_bases ATGACCGAGTCGGCTCCGGCCGAACTGGCGGCCAACCCGTTAGCCGACGGAATCCCGTTCGGCGCCAAGCTGCAACAGCT CGCCGGGCAACGCGGCGACGACACGGCGGTGACCGTCGTCGCGCTCGACGGCACCGCCACCTCGCTGACGTTCGCCGAGC TCGACGCCCGCGCCAACCAGTGGGGCCGGGCCCTGGCCGCCACCGGCGCCCAAACGGGTTCGCTTGTCGCACTTGCCATT CCCAACTCGCAGCATCTGGTGCTGGCCACGCTGGGGTGCTGGAAGATCGGCGCGGTGCCCGTGCCCATGCACTGGGACCT TCCCGAGTGGGAACGCGACCGGGTGCGCGAGGTGATCGACCCCGCCGTCGTCGTCGACGAAACGAGCCGCTGGGGGCTCG AGGCGCGCGCGGCCGGCGAGTCCGAGGCCGCCCTGCCGGTCGCCGTCTCCCCCACCGCCAACGGCATCTGCAGCAGCGGT TCCACCGGGGTGCCCAAGGTGATCCTCAACCTGGCGCCCTCGCTGTGGATCCCGCAGCACGGTGAGCCGTTCCTGTCGAA CTGGACGCCGGTGGCCCAGCCGCAGACCATCATGGTGCCCGCACCGATGTATCACACCAACGGCTTCGCCCCGCTGCTCA TGCTGCTGGGCGGCGACCATCTGGTGATCCTCGAAAAGTTCGATGCCGCATTGGTTCTCGACGTGATCGAGCGCTTCCGG ATCACCAACTTCACCGCCACACCCACCATGCTGGCCCGCATCGCAGCCCGGCCCGATGTCCGGCAGCGCGACCTGTCCAG CATCGTGTTCATTCTGCAGGGGCCGCGGTGA
Upstream 100 bases:
>100_bases TGATCCGGCTGCCGCTGAGCACCGAGGAACTCGCGCTGCGGCTGATCCCAAGCGTGGCCGACGGCGCCTTCGAGACGCTG TTCAGCGAGCCGGTGTCGGC
Downstream 100 bases:
>100_bases TGCCGCCATCGCTGCTGCACACCTGGTTCGAGCTGCTGTCCCCCGAGCAGATCGTGATGGCCTACGGCATGACCGAAAAC CTGGGGCTGACCGCGCTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Acid-CoA Ligase; Acyl-CoA Synthetase; Non-Ribosomal Peptide Synthetase; Acyl-CoA Ligase; Acetyl-CoA Synthetase; Bile Acid-Co A Ligase; Long-Chain-Fatty-Acid-CoA Ligase; Fatty-Acid-CoA Ligase; Long-Chain Fatty-Acid-CoA Ligase; Feruloyl-CoA Synthetase; Acyl-CoA Synthetase/AMP-Acid Ligase I; Amino Acid Adenylation /Thioester Reductase Family Protein; O-Succinylbenzoate-CoA Ligase; AMP-Dependent Synthetase; Acyl-CoA Synthase
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MTESAPAELAANPLADGIPFGAKLQQLAGQRGDDTAVTVVALDGTATSLTFAELDARANQWGRALAATGAQTGSLVALAI PNSQHLVLATLGCWKIGAVPVPMHWDLPEWERDRVREVIDPAVVVDETSRWGLEARAAGESEAALPVAVSPTANGICSSG STGVPKVILNLAPSLWIPQHGEPFLSNWTPVAQPQTIMVPAPMYHTNGFAPLLMLLGGDHLVILEKFDAALVLDVIERFR ITNFTATPTMLARIAARPDVRQRDLSSIVFILQGPR
Sequences:
>Translated_276_residues MTESAPAELAANPLADGIPFGAKLQQLAGQRGDDTAVTVVALDGTATSLTFAELDARANQWGRALAATGAQTGSLVALAI PNSQHLVLATLGCWKIGAVPVPMHWDLPEWERDRVREVIDPAVVVDETSRWGLEARAAGESEAALPVAVSPTANGICSSG STGVPKVILNLAPSLWIPQHGEPFLSNWTPVAQPQTIMVPAPMYHTNGFAPLLMLLGGDHLVILEKFDAALVLDVIERFR ITNFTATPTMLARIAARPDVRQRDLSSIVFILQGPR >Mature_275_residues TESAPAELAANPLADGIPFGAKLQQLAGQRGDDTAVTVVALDGTATSLTFAELDARANQWGRALAATGAQTGSLVALAIP NSQHLVLATLGCWKIGAVPVPMHWDLPEWERDRVREVIDPAVVVDETSRWGLEARAAGESEAALPVAVSPTANGICSSGS TGVPKVILNLAPSLWIPQHGEPFLSNWTPVAQPQTIMVPAPMYHTNGFAPLLMLLGGDHLVILEKFDAALVLDVIERFRI TNFTATPTMLARIAARPDVRQRDLSSIVFILQGPR
Specific function: Unknown
COG id: COG0318
COG function: function code IQ; Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29371; Mature: 29240
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTESAPAELAANPLADGIPFGAKLQQLAGQRGDDTAVTVVALDGTATSLTFAELDARANQ CCCCCCHHHHCCCCCCCCCCCHHHHHHCCCCCCCCEEEEEEECCCCCEEEHHHHHHHHHH WGRALAATGAQTGSLVALAIPNSQHLVLATLGCWKIGAVPVPMHWDLPEWERDRVREVID HHHHHHHCCCCCCCEEEEEECCCCEEEEEEECCCEECCEECCCCCCCCCHHHHHHHHHHC PAVVVDETSRWGLEARAAGESEAALPVAVSPTANGICSSGSTGVPKVILNLAPSLWIPQH CEEEEECCCCCCCEEECCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCCC GEPFLSNWTPVAQPQTIMVPAPMYHTNGFAPLLMLLGGDHLVILEKFDAALVLDVIERFR CCHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHH ITNFTATPTMLARIAARPDVRQRDLSSIVFILQGPR HCCCCCCHHHHHHHHCCCCHHHHCCCEEEEEEECCC >Mature Secondary Structure TESAPAELAANPLADGIPFGAKLQQLAGQRGDDTAVTVVALDGTATSLTFAELDARANQ CCCCCHHHHCCCCCCCCCCCHHHHHHCCCCCCCCEEEEEEECCCCCEEEHHHHHHHHHH WGRALAATGAQTGSLVALAIPNSQHLVLATLGCWKIGAVPVPMHWDLPEWERDRVREVID HHHHHHHCCCCCCCEEEEEECCCCEEEEEEECCCEECCEECCCCCCCCCHHHHHHHHHHC PAVVVDETSRWGLEARAAGESEAALPVAVSPTANGICSSGSTGVPKVILNLAPSLWIPQH CEEEEECCCCCCCEEECCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCCC GEPFLSNWTPVAQPQTIMVPAPMYHTNGFAPLLMLLGGDHLVILEKFDAALVLDVIERFR CCHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHH ITNFTATPTMLARIAARPDVRQRDLSSIVFILQGPR HCCCCCCHHHHHHHHCCCCHHHHCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA