| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408403
Identifier: 41408403
GI number: 41408403
Start: 2585455
End: 2585865
Strand: Direct
Name: 41408403
Synonym: MAP2305
Alternate gene names: NA
Gene position: 2585455-2585865 (Clockwise)
Preceding gene: 41408402
Following gene: 41408404
Centisome position: 53.53
GC content: 60.34
Gene sequence:
>411_bases ATGGCGTCGAGTGACTGGCAGCCGGTGGTCCGGGTTGGGAAACCGAGGTTCATAGCCGGAGTTGGCAATCGAATTAAAGT CGAAGTCAAGACCAGGGGCTGGCTGAGCCGCGACTGGCGTTGCTACTTCGGATCGCAAGTCTCACAACAACAACTCGACG CGCGGTACACGTCGTATCCGTGTTGGGACGAGATCCAGCGCATCGAGGGTTCCTGCGCCGAACACGACGCCGAGCGCTAC ATCGAAATGATCGATGCCGCAATCCATTACGCCAACACCAGATTGCGCAACGATGCTCTGCCGCCGACGATGACGTACGG CTCACGCAGCGACTCCCGGGCCTGTGCGGTGCGCGAACGCCAGGCCGAACTCGATGAGCTGGCCAAGAAATTGGCGAAAC CCGAGGCCTGA
Upstream 100 bases:
>100_bases GCGGTTTCAGCATTCTGGGAACAGCGTGTCAAGACGAGCAGATGACGCTCACGGGGAGATCATTACTTAGAGCGTCTTCT CTTCGAGGGGTTGGCGAAAC
Downstream 100 bases:
>100_bases CCGCGCCGGCGCGCCGTGACGGGGCGACCGGGCCGCCCGCCCGTCGCCCCGCGAGCAGACGCAAAAGCACCCGACACGCC GGGCTTCAGGGCGCTTTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MASSDWQPVVRVGKPRFIAGVGNRIKVEVKTRGWLSRDWRCYFGSQVSQQQLDARYTSYPCWDEIQRIEGSCAEHDAERY IEMIDAAIHYANTRLRNDALPPTMTYGSRSDSRACAVRERQAELDELAKKLAKPEA
Sequences:
>Translated_136_residues MASSDWQPVVRVGKPRFIAGVGNRIKVEVKTRGWLSRDWRCYFGSQVSQQQLDARYTSYPCWDEIQRIEGSCAEHDAERY IEMIDAAIHYANTRLRNDALPPTMTYGSRSDSRACAVRERQAELDELAKKLAKPEA >Mature_135_residues ASSDWQPVVRVGKPRFIAGVGNRIKVEVKTRGWLSRDWRCYFGSQVSQQQLDARYTSYPCWDEIQRIEGSCAEHDAERYI EMIDAAIHYANTRLRNDALPPTMTYGSRSDSRACAVRERQAELDELAKKLAKPEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15597; Mature: 15465
Theoretical pI: Translated: 8.31; Mature: 8.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASSDWQPVVRVGKPRFIAGVGNRIKVEVKTRGWLSRDWRCYFGSQVSQQQLDARYTSYP CCCCCCCHHHHCCCCEEEEECCCEEEEEEECCCCCCCCCEEECCCCCHHHHHHHHCCCCC CWDEIQRIEGSCAEHDAERYIEMIDAAIHYANTRLRNDALPPTMTYGSRSDSRACAVRER CHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH QAELDELAKKLAKPEA HHHHHHHHHHHCCCCC >Mature Secondary Structure ASSDWQPVVRVGKPRFIAGVGNRIKVEVKTRGWLSRDWRCYFGSQVSQQQLDARYTSYP CCCCCCHHHHCCCCEEEEECCCEEEEEEECCCCCCCCCEEECCCCCHHHHHHHHCCCCC CWDEIQRIEGSCAEHDAERYIEMIDAAIHYANTRLRNDALPPTMTYGSRSDSRACAVRER CHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH QAELDELAKKLAKPEA HHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA