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The map label for this gene is 41408360

Identifier: 41408360

GI number: 41408360

Start: 2526782

End: 2527432

Strand: Direct

Name: 41408360

Synonym: MAP2262

Alternate gene names: NA

Gene position: 2526782-2527432 (Clockwise)

Preceding gene: 41408358

Following gene: 41408372

Centisome position: 52.32

GC content: 71.74

Gene sequence:

>651_bases
ATGCCGTCGGTGACCCGCACGCCGCCGGGCCGCCGCAGCCCGGGCCGCGAGCAGCGCCGCGAGCAGCTGGAGCGCCGGCT
GTTGGACGCCACCGAACGGCTGATGCGTGACGGCGCCAGCTTCACCGAGCTCAGCGTGGATCGGCTCGCCGGTGCGGCCG
GCATCTCGCGGGCCAGCTTCTACATCTACTTCGAGGACAAGGGCCATCTGCTGCGCCGGCTGGCCAGCCGGGTGTTCGGC
GAGCTCACCGACGGCGCGCGGCGCTGGTGGAGTGTGGCCGGGCGGCACGACCCCGACGACGTGCGGGCGGCGATGACCCG
CATCATCGCCACCTATCGCCGGCATCAGGCGGTGCTGGTGGCGCTCAACGAGATGTCCGGCTACGACCCGCTGACGGCGC
AGACCTACCGCGAGATACTGACCGGCATCTCCGGCCAGCTCACCCGGGTCATCGAAGACGGTCAGGCCGACGGGTCGATC
CGCCCGCGGCTGGCCGCGGCCACCACCGCGAGCGCGTTGACCTGGATGGTCGAGCGGGCCTGCCAGCAGAACCTACCGGC
CCAGCTGCCCGCCTACGACGCGGAGCTGGCCGACACGCTGGCCGAAATCGTTTGGGGCGCACTGTATCTCAAGCCCGCCT
CCGGGATCTGA

Upstream 100 bases:

>100_bases
CCGATCCTCTCCGCTATGACACCGGTCACAGCACATCGGCGACGATATTCCTAGACAGTGTGTCTAGTCAATATGTCGAA
TAGTCGGCTAGGCTGGCCGC

Downstream 100 bases:

>100_bases
CCGCACGGCACCGCTCACACCGCCACCAGGTCGTCGGCGTGCACCGCGGGCCTGCGCAGCTCGCCGGGCAGCTCACTGGT
CGAGCGCCCCATCATGGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: TetR Family Transcriptional Regulator; AcrR Family Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MPSVTRTPPGRRSPGREQRREQLERRLLDATERLMRDGASFTELSVDRLAGAAGISRASFYIYFEDKGHLLRRLASRVFG
ELTDGARRWWSVAGRHDPDDVRAAMTRIIATYRRHQAVLVALNEMSGYDPLTAQTYREILTGISGQLTRVIEDGQADGSI
RPRLAAATTASALTWMVERACQQNLPAQLPAYDAELADTLAEIVWGALYLKPASGI

Sequences:

>Translated_216_residues
MPSVTRTPPGRRSPGREQRREQLERRLLDATERLMRDGASFTELSVDRLAGAAGISRASFYIYFEDKGHLLRRLASRVFG
ELTDGARRWWSVAGRHDPDDVRAAMTRIIATYRRHQAVLVALNEMSGYDPLTAQTYREILTGISGQLTRVIEDGQADGSI
RPRLAAATTASALTWMVERACQQNLPAQLPAYDAELADTLAEIVWGALYLKPASGI
>Mature_215_residues
PSVTRTPPGRRSPGREQRREQLERRLLDATERLMRDGASFTELSVDRLAGAAGISRASFYIYFEDKGHLLRRLASRVFGE
LTDGARRWWSVAGRHDPDDVRAAMTRIIATYRRHQAVLVALNEMSGYDPLTAQTYREILTGISGQLTRVIEDGQADGSIR
PRLAAATTASALTWMVERACQQNLPAQLPAYDAELADTLAEIVWGALYLKPASGI

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24014; Mature: 23882

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSVTRTPPGRRSPGREQRREQLERRLLDATERLMRDGASFTELSVDRLAGAAGISRASF
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEE
YIYFEDKGHLLRRLASRVFGELTDGARRWWSVAGRHDPDDVRAAMTRIIATYRRHQAVLV
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHE
ALNEMSGYDPLTAQTYREILTGISGQLTRVIEDGQADGSIRPRLAAATTASALTWMVERA
EEHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
CQQNLPAQLPAYDAELADTLAEIVWGALYLKPASGI
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PSVTRTPPGRRSPGREQRREQLERRLLDATERLMRDGASFTELSVDRLAGAAGISRASF
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEE
YIYFEDKGHLLRRLASRVFGELTDGARRWWSVAGRHDPDDVRAAMTRIIATYRRHQAVLV
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHE
ALNEMSGYDPLTAQTYREILTGISGQLTRVIEDGQADGSIRPRLAAATTASALTWMVERA
EEHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
CQQNLPAQLPAYDAELADTLAEIVWGALYLKPASGI
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA