| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is 41407502
Identifier: 41407502
GI number: 41407502
Start: 1516851
End: 1518032
Strand: Direct
Name: 41407502
Synonym: MAP1404
Alternate gene names: NA
Gene position: 1516851-1518032 (Clockwise)
Preceding gene: 41407501
Following gene: 41407503
Centisome position: 31.41
GC content: 69.04
Gene sequence:
>1182_bases ATGAAGATGTCAGGCCTGCTTTCCCGAAACACCGACCGGCCCGGAATCGTCGGCACCGCCCGCGTCGACCGGAACATCGA CCGACTGCTGCGCCGGGTCTGCCCCGGCGACATCGTCGTGCTCGACGTCCTGGACCTGGACCGCATCACCGCCGACGCCC TGGTGGAAGCCGACATCGCCGCCGTGGTCAACGCCTCCCCGTCGGTCTCGGGCCGCTACCCCAACCTGGGGCCGGAGGTG CTGGTCAACAACGGGGTGACGCTGATCGACGAGGCCGGGCCGGACATCTTCAAGAAGGTCAAAGACGGCGCCAAGATCCG CCTGTACGACGGCGGGGTGTACGCCGGCGACCGCCGGCTGGTGCGCGGCACCGAACGCACCGAGCACGACATCGCCGACC TGATGCGCGAGGCCAAGAGCGGGCTGGCCGCCCACCTCGAGGCGTTCGCCGGCAACACCATCGAGTTCATCAAGAGCGAG AGCCCGCTGCTGATCGACGGCATCGGCATCCCCGACATCGACGTCGACCTGCGCCGCAGGCACGTGGTGATCGTCGCCGA CGAGCCCAGCGCCGAAGAGGACCTCAAGTCGCTCAAGCCGTTCATCAAGGAGTACCAGCCGGCGCTGATCGGGGTCGGCA CCGGCGCGGATGTGTTGCGCAAGGCGGGGTATCGGCCGCAGATCATCGTCGGCGATCCCGACCAGATCAGCGCCGACGCG CTCAAGTGCGGCGCCCAGGTGGTGCTGCCCGCCGACGCCGACGGGCACGCCCCCGGGCTGGAACGCATCCAGGACCTGGG CGTGGGGGCGATGACGTTCCCGGCCGCCGGCTCGGCCATCGACCTGGCCCTGCTGCTGGCCGATCACCACGGCGCCGCCC TGCTGGTGACGGCGGGCCACACCGCCAACATCGAGACGTTCTTCGACCGCACCCGCGCGCACAGCAACCCGTCCACCTTC CTGACCCGGCTGCGGGTGGGGGAGAAGGTGGTGGACGCCAAGGCCGTCGCCACCCTGTACCGCAACCACATCTCGGCGGG CGCCATCGCGCTGCTGGCGCTGACCATGCTGATCGCCGTCATCGTCGCGCTATGGGTGTCGCGCACCGACGGTGTGGTGC TGCACTGGATCACCGACTACTGGAACCACTTCTCGCTGATGGTGCAGAAGTGGGTCACCTAG
Upstream 100 bases:
>100_bases GGCACCTACCTGTGACGAATGGGACTCTAGATAACTTATGAGGCTGATGTTACGGCGCGCCTCCCGACCTCGCCGACGCT TCACCGACAGAATCGCCCCC
Downstream 100 bases:
>100_bases ATGATCTCGCTACGCCAACACGCCCTGTCGCTGGCCGCCGTCTTCCTGGCGCTGGCCGTGGGAGTGGTGCTGGGCTCCGG CTTCCTGTCCGACACCTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: Membrane-Anchored Protein; Thiamin Pyrophosphokinase Catalytic Subunit; Pyrophosphokinase; Thiamine Pyrophosphokinase-Like
Number of amino acids: Translated: 393; Mature: 393
Protein sequence:
>393_residues MKMSGLLSRNTDRPGIVGTARVDRNIDRLLRRVCPGDIVVLDVLDLDRITADALVEADIAAVVNASPSVSGRYPNLGPEV LVNNGVTLIDEAGPDIFKKVKDGAKIRLYDGGVYAGDRRLVRGTERTEHDIADLMREAKSGLAAHLEAFAGNTIEFIKSE SPLLIDGIGIPDIDVDLRRRHVVIVADEPSAEEDLKSLKPFIKEYQPALIGVGTGADVLRKAGYRPQIIVGDPDQISADA LKCGAQVVLPADADGHAPGLERIQDLGVGAMTFPAAGSAIDLALLLADHHGAALLVTAGHTANIETFFDRTRAHSNPSTF LTRLRVGEKVVDAKAVATLYRNHISAGAIALLALTMLIAVIVALWVSRTDGVVLHWITDYWNHFSLMVQKWVT
Sequences:
>Translated_393_residues MKMSGLLSRNTDRPGIVGTARVDRNIDRLLRRVCPGDIVVLDVLDLDRITADALVEADIAAVVNASPSVSGRYPNLGPEV LVNNGVTLIDEAGPDIFKKVKDGAKIRLYDGGVYAGDRRLVRGTERTEHDIADLMREAKSGLAAHLEAFAGNTIEFIKSE SPLLIDGIGIPDIDVDLRRRHVVIVADEPSAEEDLKSLKPFIKEYQPALIGVGTGADVLRKAGYRPQIIVGDPDQISADA LKCGAQVVLPADADGHAPGLERIQDLGVGAMTFPAAGSAIDLALLLADHHGAALLVTAGHTANIETFFDRTRAHSNPSTF LTRLRVGEKVVDAKAVATLYRNHISAGAIALLALTMLIAVIVALWVSRTDGVVLHWITDYWNHFSLMVQKWVT >Mature_393_residues MKMSGLLSRNTDRPGIVGTARVDRNIDRLLRRVCPGDIVVLDVLDLDRITADALVEADIAAVVNASPSVSGRYPNLGPEV LVNNGVTLIDEAGPDIFKKVKDGAKIRLYDGGVYAGDRRLVRGTERTEHDIADLMREAKSGLAAHLEAFAGNTIEFIKSE SPLLIDGIGIPDIDVDLRRRHVVIVADEPSAEEDLKSLKPFIKEYQPALIGVGTGADVLRKAGYRPQIIVGDPDQISADA LKCGAQVVLPADADGHAPGLERIQDLGVGAMTFPAAGSAIDLALLLADHHGAALLVTAGHTANIETFFDRTRAHSNPSTF LTRLRVGEKVVDAKAVATLYRNHISAGAIALLALTMLIAVIVALWVSRTDGVVLHWITDYWNHFSLMVQKWVT
Specific function: Unknown
COG id: COG4825
COG function: function code S; Uncharacterized membrane-anchored protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42281; Mature: 42281
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMSGLLSRNTDRPGIVGTARVDRNIDRLLRRVCPGDIVVLDVLDLDRITADALVEADIA CCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHH AVVNASPSVSGRYPNLGPEVLVNNGVTLIDEAGPDIFKKVKDGAKIRLYDGGVYAGDRRL HHCCCCCCCCCCCCCCCCCEEECCCEEEEECCCHHHHHHHCCCCEEEEEECCEEECCCCE VRGTERTEHDIADLMREAKSGLAAHLEAFAGNTIEFIKSESPLLIDGIGIPDIDVDLRRR ECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEECCCCCCCCCCCCCE HVVIVADEPSAEEDLKSLKPFIKEYQPALIGVGTGADVLRKAGYRPQIIVGDPDQISADA EEEEEECCCCHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHCCCCCEEEECCCCCCCHHH LKCGAQVVLPADADGHAPGLERIQDLGVGAMTFPAAGSAIDLALLLADHHGAALLVTAGH HHCCCEEEEECCCCCCCCHHHHHHHCCCCCEECCCCCCHHEEEEEEECCCCCEEEEECCC TANIETFFDRTRAHSNPSTFLTRLRVGEKVVDAKAVATLYRNHISAGAIALLALTMLIAV CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH IVALWVSRTDGVVLHWITDYWNHFSLMVQKWVT HHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKMSGLLSRNTDRPGIVGTARVDRNIDRLLRRVCPGDIVVLDVLDLDRITADALVEADIA CCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHH AVVNASPSVSGRYPNLGPEVLVNNGVTLIDEAGPDIFKKVKDGAKIRLYDGGVYAGDRRL HHCCCCCCCCCCCCCCCCCEEECCCEEEEECCCHHHHHHHCCCCEEEEEECCEEECCCCE VRGTERTEHDIADLMREAKSGLAAHLEAFAGNTIEFIKSESPLLIDGIGIPDIDVDLRRR ECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEECCCCCCCCCCCCCE HVVIVADEPSAEEDLKSLKPFIKEYQPALIGVGTGADVLRKAGYRPQIIVGDPDQISADA EEEEEECCCCHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHCCCCCEEEECCCCCCCHHH LKCGAQVVLPADADGHAPGLERIQDLGVGAMTFPAAGSAIDLALLLADHHGAALLVTAGH HHCCCEEEEECCCCCCCCHHHHHHHCCCCCEECCCCCCHHEEEEEEECCCCCEEEEECCC TANIETFFDRTRAHSNPSTFLTRLRVGEKVVDAKAVATLYRNHISAGAIALLALTMLIAV CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH IVALWVSRTDGVVLHWITDYWNHFSLMVQKWVT HHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA