| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41407503
Identifier: 41407503
GI number: 41407503
Start: 1518033
End: 1518986
Strand: Direct
Name: 41407503
Synonym: MAP1405
Alternate gene names: NA
Gene position: 1518033-1518986 (Clockwise)
Preceding gene: 41407502
Following gene: 41407504
Centisome position: 31.43
GC content: 70.23
Gene sequence:
>954_bases ATGATCTCGCTACGCCAACACGCCCTGTCGCTGGCCGCCGTCTTCCTGGCGCTGGCCGTGGGAGTGGTGCTGGGCTCCGG CTTCCTGTCCGACACCTTGCTGTCCAGCCTGCGTGACGAGAAGCGCGACCTGCACACCCAGATCAACGGGCTCAACGACC AGAAGAATGTGCTGAACGAAAAGCTCAGCGCGGCAAACAATTTCGACACCCAACTGGCCGGTCGGATGCTGCACGACGCG CTGGGCGGCAAGTCGGTGGTGGTGTTTCGCACCCCGGACGCCAAGGACGACGACGTGGCCGGGGTGTCGAAGTTCATCGC CCAGGCCGGCGGGACGGTGACCACGACGGTGGCGCTGACCCAGGAATTCGTCGAGGCCAATTCCGCGGAGAAGCTGCAGA CGGTGGTCAACTCGTCGGTGCTGCCCGCCGGCCAGCAGCTGAGCACCAAGCTCGTCGACCAGGGCTCGCAGGCGGGCGAC CTGATGGGAATCGCCTTGTTGACCAACGCCACCCCGGCCGGCCCGCCGCCGCCGGAGGTCTCCGAGACCCAGCGCAACAC CGTGCTCGCGGCGCTGCGCGACACCGGCTTCATCACCTACCAGGGCGGCGACCACCTGGGCGCGGCCAACGCCGCGCTGG TCGTCACCGGCGGCGCGCTACCCCAGGACGCCGGCAACCAGGGCGTCAGCGTGGCCCGGTTCTCGGCCGCGCTGGCCCCG CACGGCTCGGCCACGTTGCTGGCCGGGCGCGACGGATCGGCGACCGGAAGCGCCGCCGTCGCCGTGACCCGCGCCGACTC CGGGATGAACTCCGCGGTCAGCACCGTCGACAACGTCGACGCCGCGCCGGGCCGCATCACCGCCGTCCTCGGCTTGCACG ACCTGATGAACGGCGGCCACCCCGGGCAGTACGGCACCGGTCACGGCGCCACGTCGATCACGGTCGCTCAGTAG
Upstream 100 bases:
>100_bases CGTCGCGCTATGGGTGTCGCGCACCGACGGTGTGGTGCTGCACTGGATCACCGACTACTGGAACCACTTCTCGCTGATGG TGCAGAAGTGGGTCACCTAG
Downstream 100 bases:
>100_bases CGGGCGTGTTCCCCGCGGCGTGGCGCCGTGGATGTTAGGGTGGGTTTCCGTGGGTCGGCAGGCCCAGCTAGTGATTCGCT AGAACAATTTTGACGCCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MISLRQHALSLAAVFLALAVGVVLGSGFLSDTLLSSLRDEKRDLHTQINGLNDQKNVLNEKLSAANNFDTQLAGRMLHDA LGGKSVVVFRTPDAKDDDVAGVSKFIAQAGGTVTTTVALTQEFVEANSAEKLQTVVNSSVLPAGQQLSTKLVDQGSQAGD LMGIALLTNATPAGPPPPEVSETQRNTVLAALRDTGFITYQGGDHLGAANAALVVTGGALPQDAGNQGVSVARFSAALAP HGSATLLAGRDGSATGSAAVAVTRADSGMNSAVSTVDNVDAAPGRITAVLGLHDLMNGGHPGQYGTGHGATSITVAQ
Sequences:
>Translated_317_residues MISLRQHALSLAAVFLALAVGVVLGSGFLSDTLLSSLRDEKRDLHTQINGLNDQKNVLNEKLSAANNFDTQLAGRMLHDA LGGKSVVVFRTPDAKDDDVAGVSKFIAQAGGTVTTTVALTQEFVEANSAEKLQTVVNSSVLPAGQQLSTKLVDQGSQAGD LMGIALLTNATPAGPPPPEVSETQRNTVLAALRDTGFITYQGGDHLGAANAALVVTGGALPQDAGNQGVSVARFSAALAP HGSATLLAGRDGSATGSAAVAVTRADSGMNSAVSTVDNVDAAPGRITAVLGLHDLMNGGHPGQYGTGHGATSITVAQ >Mature_317_residues MISLRQHALSLAAVFLALAVGVVLGSGFLSDTLLSSLRDEKRDLHTQINGLNDQKNVLNEKLSAANNFDTQLAGRMLHDA LGGKSVVVFRTPDAKDDDVAGVSKFIAQAGGTVTTTVALTQEFVEANSAEKLQTVVNSSVLPAGQQLSTKLVDQGSQAGD LMGIALLTNATPAGPPPPEVSETQRNTVLAALRDTGFITYQGGDHLGAANAALVVTGGALPQDAGNQGVSVARFSAALAP HGSATLLAGRDGSATGSAAVAVTRADSGMNSAVSTVDNVDAAPGRITAVLGLHDLMNGGHPGQYGTGHGATSITVAQ
Specific function: Likely involved in transport processes across the outer membrane. Appears to be specific for mycolic acid-containing membranes [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021522 [H]
Pfam domain/function: PF11382 DUF3186 [H]
EC number: NA
Molecular weight: Translated: 32064; Mature: 32064
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISLRQHALSLAAVFLALAVGVVLGSGFLSDTLLSSLRDEKRDLHTQINGLNDQKNVLNE CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH KLSAANNFDTQLAGRMLHDALGGKSVVVFRTPDAKDDDVAGVSKFIAQAGGTVTTTVALT HHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEHHHHH QEFVEANSAEKLQTVVNSSVLPAGQQLSTKLVDQGSQAGDLMGIALLTNATPAGPPPPEV HHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCC SETQRNTVLAALRDTGFITYQGGDHLGAANAALVVTGGALPQDAGNQGVSVARFSAALAP CHHHHHHEEEEECCCCEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCC HGSATLLAGRDGSATGSAAVAVTRADSGMNSAVSTVDNVDAAPGRITAVLGLHDLMNGGH CCCEEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCEEHHHHHHHHHCCCC PGQYGTGHGATSITVAQ CCCCCCCCCCCEEEEEC >Mature Secondary Structure MISLRQHALSLAAVFLALAVGVVLGSGFLSDTLLSSLRDEKRDLHTQINGLNDQKNVLNE CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH KLSAANNFDTQLAGRMLHDALGGKSVVVFRTPDAKDDDVAGVSKFIAQAGGTVTTTVALT HHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEHHHHH QEFVEANSAEKLQTVVNSSVLPAGQQLSTKLVDQGSQAGDLMGIALLTNATPAGPPPPEV HHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCC SETQRNTVLAALRDTGFITYQGGDHLGAANAALVVTGGALPQDAGNQGVSVARFSAALAP CHHHHHHEEEEECCCCEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCC HGSATLLAGRDGSATGSAAVAVTRADSGMNSAVSTVDNVDAAPGRITAVLGLHDLMNGGH CCCEEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCEEHHHHHHHHHCCCC PGQYGTGHGATSITVAQ CCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]