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The map label for this gene is nagD [H]

Identifier: 41407497

GI number: 41407497

Start: 1511862

End: 1512875

Strand: Direct

Name: nagD [H]

Synonym: MAP1399

Alternate gene names: 41407497

Gene position: 1511862-1512875 (Clockwise)

Preceding gene: 41407496

Following gene: 41407498

Centisome position: 31.3

GC content: 76.33

Gene sequence:

>1014_bases
GTGAAAACCCTTGCGCAGCAACATGATTGCCTGCTGATCGACCTGGACGGGACGGCGTTTCGCGGGCGTTCGCCCACCGA
GGGCGCGGTGCAGGCGTTGGCGAGGCTGCCCGGGCGCGCGTTGTTCGTCACCAACAACGCATCCCGCAGCGCCGCCGAGG
TCGCCGCGCACCTGACCGAGCTCGGCTTCACCGCCACCGCCGACGACGTGGCCACCAGCGCCCAGAGCGCCGCCCACCTG
CTGGCCGGCCAGCTGCCGGCCGGCGCGCCGGTGCTGATCGTGGGCACCGAGGCACTGGCCGGCGAGATCGCGGCCGTCGG
GCTGCGCCCGGTGCGCCGATACGACGACGGCCCCGTCGCCGTCGTGCAGGGCCTGTCCATGACCATCGGTTGGCCGGACC
TCGCCGAGGCGGCGCTGGCCATCCGGGCCGGCGCGGTGTGGGTGGCCGCCAACATCGACCTCACCCTGCCCACCGAGCGG
GGACTGCTGCCCGGCAACGGATCCCTGGTGGCCGCAGTGGCCGCGGCCACCGGCGCCACCCCGCAGGTCGCGGGCAAACC
GGCGCCGGCGCTGCTGCGCGACGCGGCGGCCCGCGGCGACTTCCGCGCGCCGCTGGTGATCGGCGACCGCCTCGACACCG
ACATCGAGGGCGCCAACGCCGCCGGGCTGCCCAGCCTGCTGGTGCTCACCGGGGTCAACTCGGCGCGAGACGCGGTGTAC
GCCAAGCCCGCCCGGCGCCCCACCTACATCGGCCACGACCTGCGCGCCCTGCACCAGGACGCCGCGGCGCTGGCGGTGGC
GCCGCAGCCGGGCTGGCGGGTCGACGTCGGCGACACGGCCATCACGGTCAGCGGCGACGGACGCGACGACGGGTCGGGCG
ACGGGCTGTCGGTGGTCCGCGCGGTCGCCAGCGCGGTCTGGGGCTCGCCGGACGCCGGTACGCTGCCCATCCGGGCCGGC
GACGACCGGGCCCGCGCCGCGCTGGCGCGCTGGTCTTTGGTGCGCACCGACTAG

Upstream 100 bases:

>100_bases
GACGAGGCGCTGCAATGGTTCCTGCACGCCGCGGCCGCCGACCTCGACGGCGTCACCGACGCCGAAGACCGGGTCAGTGA
ACTCGCCTGACGTGTCCGGC

Downstream 100 bases:

>100_bases
CGGGTGACTAGCGTGGTAACGCGATGAGTATCGATCCCGATCAGATTCGCGCTGAAATCGACGCCTTGCTGGCCCGGCTG
CCCCAGCCCGGGGACACCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MKTLAQQHDCLLIDLDGTAFRGRSPTEGAVQALARLPGRALFVTNNASRSAAEVAAHLTELGFTATADDVATSAQSAAHL
LAGQLPAGAPVLIVGTEALAGEIAAVGLRPVRRYDDGPVAVVQGLSMTIGWPDLAEAALAIRAGAVWVAANIDLTLPTER
GLLPGNGSLVAAVAAATGATPQVAGKPAPALLRDAAARGDFRAPLVIGDRLDTDIEGANAAGLPSLLVLTGVNSARDAVY
AKPARRPTYIGHDLRALHQDAAALAVAPQPGWRVDVGDTAITVSGDGRDDGSGDGLSVVRAVASAVWGSPDAGTLPIRAG
DDRARAALARWSLVRTD

Sequences:

>Translated_337_residues
MKTLAQQHDCLLIDLDGTAFRGRSPTEGAVQALARLPGRALFVTNNASRSAAEVAAHLTELGFTATADDVATSAQSAAHL
LAGQLPAGAPVLIVGTEALAGEIAAVGLRPVRRYDDGPVAVVQGLSMTIGWPDLAEAALAIRAGAVWVAANIDLTLPTER
GLLPGNGSLVAAVAAATGATPQVAGKPAPALLRDAAARGDFRAPLVIGDRLDTDIEGANAAGLPSLLVLTGVNSARDAVY
AKPARRPTYIGHDLRALHQDAAALAVAPQPGWRVDVGDTAITVSGDGRDDGSGDGLSVVRAVASAVWGSPDAGTLPIRAG
DDRARAALARWSLVRTD
>Mature_337_residues
MKTLAQQHDCLLIDLDGTAFRGRSPTEGAVQALARLPGRALFVTNNASRSAAEVAAHLTELGFTATADDVATSAQSAAHL
LAGQLPAGAPVLIVGTEALAGEIAAVGLRPVRRYDDGPVAVVQGLSMTIGWPDLAEAALAIRAGAVWVAANIDLTLPTER
GLLPGNGSLVAAVAAATGATPQVAGKPAPALLRDAAARGDFRAPLVIGDRLDTDIEGANAAGLPSLLVLTGVNSARDAVY
AKPARRPTYIGHDLRALHQDAAALAVAPQPGWRVDVGDTAITVSGDGRDDGSGDGLSVVRAVASAVWGSPDAGTLPIRAG
DDRARAALARWSLVRTD

Specific function: Unknown

COG id: COG0647

COG function: function code G; Predicted sugar phosphatases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. NagD family [H]

Homologues:

Organism=Homo sapiens, GI10092677, Length=247, Percent_Identity=35.2226720647773, Blast_Score=92, Evalue=7e-19,
Organism=Homo sapiens, GI108796653, Length=262, Percent_Identity=33.587786259542, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI14149777, Length=247, Percent_Identity=30.3643724696356, Blast_Score=68, Evalue=9e-12,
Organism=Escherichia coli, GI1786890, Length=245, Percent_Identity=28.9795918367347, Blast_Score=84, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI193210059, Length=283, Percent_Identity=31.095406360424, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI86563050, Length=268, Percent_Identity=29.8507462686567, Blast_Score=88, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI17560956, Length=292, Percent_Identity=25.6849315068493, Blast_Score=82, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17562458, Length=292, Percent_Identity=25.6849315068493, Blast_Score=81, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17558880, Length=292, Percent_Identity=25.6849315068493, Blast_Score=81, Evalue=7e-16,
Organism=Saccharomyces cerevisiae, GI6319965, Length=248, Percent_Identity=23.7903225806452, Blast_Score=74, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24666141, Length=263, Percent_Identity=27.3764258555133, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24656330, Length=253, Percent_Identity=28.0632411067194, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI19920940, Length=226, Percent_Identity=31.4159292035398, Blast_Score=75, Evalue=7e-14,
Organism=Drosophila melanogaster, GI24656326, Length=255, Percent_Identity=25.4901960784314, Blast_Score=74, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006357
- InterPro:   IPR006354
- InterPro:   IPR023215 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 34195; Mature: 34195

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLAQQHDCLLIDLDGTAFRGRSPTEGAVQALARLPGRALFVTNNASRSAAEVAAHLTE
CCCCCCCCCEEEEEECCCEECCCCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHH
LGFTATADDVATSAQSAAHLLAGQLPAGAPVLIVGTEALAGEIAAVGLRPVRRYDDGPVA
HCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHCCHHHHHCCCCCEE
VVQGLSMTIGWPDLAEAALAIRAGAVWVAANIDLTLPTERGLLPGNGSLVAAVAAATGAT
EECCCEEEECCHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCCCEEEEEEHHCCCC
PQVAGKPAPALLRDAAARGDFRAPLVIGDRLDTDIEGANAAGLPSLLVLTGVNSARDAVY
CCCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHE
AKPARRPTYIGHDLRALHQDAAALAVAPQPGWRVDVGDTAITVSGDGRDDGSGDGLSVVR
ECCCCCCCCCCHHHHHHHHCCCEEEECCCCCCEEECCCEEEEEECCCCCCCCCCHHHHHH
AVASAVWGSPDAGTLPIRAGDDRARAALARWSLVRTD
HHHHHHCCCCCCCEEEEECCCHHHHHHHHHHEEEECC
>Mature Secondary Structure
MKTLAQQHDCLLIDLDGTAFRGRSPTEGAVQALARLPGRALFVTNNASRSAAEVAAHLTE
CCCCCCCCCEEEEEECCCEECCCCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHH
LGFTATADDVATSAQSAAHLLAGQLPAGAPVLIVGTEALAGEIAAVGLRPVRRYDDGPVA
HCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHCCHHHHHCCCCCEE
VVQGLSMTIGWPDLAEAALAIRAGAVWVAANIDLTLPTERGLLPGNGSLVAAVAAATGAT
EECCCEEEECCHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCCCEEEEEEHHCCCC
PQVAGKPAPALLRDAAARGDFRAPLVIGDRLDTDIEGANAAGLPSLLVLTGVNSARDAVY
CCCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHE
AKPARRPTYIGHDLRALHQDAAALAVAPQPGWRVDVGDTAITVSGDGRDDGSGDGLSVVR
ECCCCCCCCCCHHHHHHHHCCCEEEECCCCCCEEECCCEEEEEECCCCCCCCCCHHHHHH
AVASAVWGSPDAGTLPIRAGDDRARAALARWSLVRTD
HHHHHHCCCCCCCEEEEECCCHHHHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA