| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41407496
Identifier: 41407496
GI number: 41407496
Start: 1511057
End: 1511851
Strand: Direct
Name: 41407496
Synonym: MAP1398
Alternate gene names: NA
Gene position: 1511057-1511851 (Clockwise)
Preceding gene: 41407495
Following gene: 41407497
Centisome position: 31.29
GC content: 76.98
Gene sequence:
>795_bases GTGGTCGACGACAGGCACCCGCATCGCGGCGAACGGCGGACCCGACCGGCGTCGTGGTCCGGCCCGGGTCGTGCCCGCCC CGCCCAGCCGCAGACCCCGGCGCGTCGGGGTGCCCCGCCCGACCGCGCGGCGGCCGACGGGCCGCCGATACCGCCGGGGG TGGAGGCCAAGCAGCTGGCCCCCGACATCCGCCGCGAGCTGAGCACCCTGGACCGCGCCACCGCCGACGCGGTGGCGCGG CACCTGGTCGCCGCGGGCGAGCTGCTGGACGAGGACCCGGAGGCGGCGTTGCGCCACGCCCGGGCCGCGCGGGCCCGGTC GTCGCGGATCGCCGCCATCCGCGAGGCGGTCGGCATCGCCGCCTACCACTGCGGCGATTGGGCCCAGGCGCTGGCGGAGT TGCGCGCCGCCCGCCGGATGGGCAGCAAGTCCGCGCTGCTGGCCCTGATCGCCGATTGCGAACGCGGACTCGGCCGTCCG GAGCGCGCGATCGAGCTGGCCCGCGGGCCGGAGGCCGCCGAGCTGTCCGGCGACGACGCCGACGAGTTGCGCATCGTCGC CGCCGGGGCCCGCGCCGACCTCGGCCAGCTGGAGCAGGCGCTGACCATTTTGTCCACGCCGCAACTGGATTCGACCCGCA CCGGCTCCACGGCGGCGCGGCTGTTCTACGCCTACGCCGACACGCTGCTGGCGCTCGGCCGCAACGACGAGGCGCTGCAA TGGTTCCTGCACGCCGCGGCCGCCGACCTCGACGGCGTCACCGACGCCGAAGACCGGGTCAGTGAACTCGCCTGA
Upstream 100 bases:
>100_bases ACCATCGTGGCGATCGCGACCTACTGCCCGGCGGTGATCGCGCCGCTGCTCGGTAACCGGCTGGCATCCTGAGCGCGGGG CGGCCCGTATTCTCGGCAGC
Downstream 100 bases:
>100_bases CGTGTCCGGCGTGAAAACCCTTGCGCAGCAACATGATTGCCTGCTGATCGACCTGGACGGGACGGCGTTTCGCGGGCGTT CGCCCACCGAGGGCGCGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MVDDRHPHRGERRTRPASWSGPGRARPAQPQTPARRGAPPDRAAADGPPIPPGVEAKQLAPDIRRELSTLDRATADAVAR HLVAAGELLDEDPEAALRHARAARARSSRIAAIREAVGIAAYHCGDWAQALAELRAARRMGSKSALLALIADCERGLGRP ERAIELARGPEAAELSGDDADELRIVAAGARADLGQLEQALTILSTPQLDSTRTGSTAARLFYAYADTLLALGRNDEALQ WFLHAAAADLDGVTDAEDRVSELA
Sequences:
>Translated_264_residues MVDDRHPHRGERRTRPASWSGPGRARPAQPQTPARRGAPPDRAAADGPPIPPGVEAKQLAPDIRRELSTLDRATADAVAR HLVAAGELLDEDPEAALRHARAARARSSRIAAIREAVGIAAYHCGDWAQALAELRAARRMGSKSALLALIADCERGLGRP ERAIELARGPEAAELSGDDADELRIVAAGARADLGQLEQALTILSTPQLDSTRTGSTAARLFYAYADTLLALGRNDEALQ WFLHAAAADLDGVTDAEDRVSELA >Mature_264_residues MVDDRHPHRGERRTRPASWSGPGRARPAQPQTPARRGAPPDRAAADGPPIPPGVEAKQLAPDIRRELSTLDRATADAVAR HLVAAGELLDEDPEAALRHARAARARSSRIAAIREAVGIAAYHCGDWAQALAELRAARRMGSKSALLALIADCERGLGRP ERAIELARGPEAAELSGDDADELRIVAAGARADLGQLEQALTILSTPQLDSTRTGSTAARLFYAYADTLLALGRNDEALQ WFLHAAAADLDGVTDAEDRVSELA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28095; Mature: 28095
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDDRHPHRGERRTRPASWSGPGRARPAQPQTPARRGAPPDRAAADGPPIPPGVEAKQLA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH PDIRRELSTLDRATADAVARHLVAAGELLDEDPEAALRHARAARARSSRIAAIREAVGIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AYHCGDWAQALAELRAARRMGSKSALLALIADCERGLGRPERAIELARGPEAAELSGDDA HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCH DELRIVAAGARADLGQLEQALTILSTPQLDSTRTGSTAARLFYAYADTLLALGRNDEALQ HHEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHH WFLHAAAADLDGVTDAEDRVSELA HHHHHHHHHCCCCCCHHHHHHHCC >Mature Secondary Structure MVDDRHPHRGERRTRPASWSGPGRARPAQPQTPARRGAPPDRAAADGPPIPPGVEAKQLA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH PDIRRELSTLDRATADAVARHLVAAGELLDEDPEAALRHARAARARSSRIAAIREAVGIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AYHCGDWAQALAELRAARRMGSKSALLALIADCERGLGRPERAIELARGPEAAELSGDDA HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCH DELRIVAAGARADLGQLEQALTILSTPQLDSTRTGSTAARLFYAYADTLLALGRNDEALQ HHEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHH WFLHAAAADLDGVTDAEDRVSELA HHHHHHHHHCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA