| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is fabG [H]
Identifier: 41407475
GI number: 41407475
Start: 1489452
End: 1490240
Strand: Direct
Name: fabG [H]
Synonym: MAP1377
Alternate gene names: 41407475
Gene position: 1489452-1490240 (Clockwise)
Preceding gene: 41407470
Following gene: 41407476
Centisome position: 30.84
GC content: 63.37
Gene sequence:
>789_bases TTGATGGATCTGTCCGGCAAGAAGGCTGTTGTCACTGGCGCCGGGGGAGACGGCCTGGGTCAGGCGATCGCCAATCGGCT GGGCGGGCTGGGTGCCGACATCGCGCTGATTGGCCGCACGCTGGAAAAAGTGCAACGTCGTGGTCGCGAAGTCGAGGAAC GCTGGGGGGTCAAGACGGTCGCGATCAGCGCCGACATGTCGGACTGGGATCAAGTGCATAATGCCGTGCGCGAGGCGCAC TGGCAGCTGGGTGGTCTCGACATCATGGTCAACAACCCCGTGATGGTCGCCGGAGGGCTGTTCGAGACTCAGACCAAGGA GCAGATCGACTTCACCGTGCTCGGCAGCCTGTCGATGATGATGTACGGCGCACACGCCGCACTGCAGTTCCTGCTTCCTC AGGGGTCGGGGAAGATCATCAATATCGGCTCGGTCGGTGGCCGTATCCAGCAGCGGGGCCTTGTTGTGTACAACGCGTGT AAGGCCGGCGTGATCGGGTTCACCCGCAACCTCGCCCATGAGGTGGCTCTGCGCGGAGTGAACGTGCTTGGCGTGGCGCC CGGCATCATGCTCAATCCCCAACTCAAGCAATATGTTTTGGATCCGCAGGACGACCAGGAGCGCGCGGGCCGCGCCGCGA TCATCGAGGCGATCACGCAGCAGGTGCAACTCGGCCGGGCCTCGCTTCCGGAGGAAGCCGCGAATATGGTTGCCTTCCTT GCTACCGAGGCCGCCGATTATCTGTGCGGCCAGACCATCGATGTCGCCGGCGGACAGTGGATGGGCTGA
Upstream 100 bases:
>100_bases GGGAGCCGTCGTGACAATCCAGGATGAAAAGCAGGACTGGGCAGAAGTGCTGGGGTTTGACCGGCTGCCGGAGCACATTG TCGATAAGCGGGTCACCGAG
Downstream 100 bases:
>100_bases TCCAATGCCGGCAGTCAACGATCTCCTGCAAACCGCGGTTGCCCAGACCGGTCTCGACGATTTCGGGGATGATTCCTTTC GAGAAGGCCTCGAGATACTG
Product: hypothetical protein
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MMDLSGKKAVVTGAGGDGLGQAIANRLGGLGADIALIGRTLEKVQRRGREVEERWGVKTVAISADMSDWDQVHNAVREAH WQLGGLDIMVNNPVMVAGGLFETQTKEQIDFTVLGSLSMMMYGAHAALQFLLPQGSGKIINIGSVGGRIQQRGLVVYNAC KAGVIGFTRNLAHEVALRGVNVLGVAPGIMLNPQLKQYVLDPQDDQERAGRAAIIEAITQQVQLGRASLPEEAANMVAFL ATEAADYLCGQTIDVAGGQWMG
Sequences:
>Translated_262_residues MMDLSGKKAVVTGAGGDGLGQAIANRLGGLGADIALIGRTLEKVQRRGREVEERWGVKTVAISADMSDWDQVHNAVREAH WQLGGLDIMVNNPVMVAGGLFETQTKEQIDFTVLGSLSMMMYGAHAALQFLLPQGSGKIINIGSVGGRIQQRGLVVYNAC KAGVIGFTRNLAHEVALRGVNVLGVAPGIMLNPQLKQYVLDPQDDQERAGRAAIIEAITQQVQLGRASLPEEAANMVAFL ATEAADYLCGQTIDVAGGQWMG >Mature_262_residues MMDLSGKKAVVTGAGGDGLGQAIANRLGGLGADIALIGRTLEKVQRRGREVEERWGVKTVAISADMSDWDQVHNAVREAH WQLGGLDIMVNNPVMVAGGLFETQTKEQIDFTVLGSLSMMMYGAHAALQFLLPQGSGKIINIGSVGGRIQQRGLVVYNAC KAGVIGFTRNLAHEVALRGVNVLGVAPGIMLNPQLKQYVLDPQDDQERAGRAAIIEAITQQVQLGRASLPEEAANMVAFL ATEAADYLCGQTIDVAGGQWMG
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI19923817, Length=267, Percent_Identity=27.3408239700375, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI15277342, Length=270, Percent_Identity=30, Blast_Score=88, Evalue=6e-18, Organism=Homo sapiens, GI40254992, Length=248, Percent_Identity=30.6451612903226, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI32483357, Length=259, Percent_Identity=27.4131274131274, Blast_Score=82, Evalue=7e-16, Organism=Homo sapiens, GI31542939, Length=195, Percent_Identity=32.8205128205128, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI4503817, Length=190, Percent_Identity=31.0526315789474, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI5031737, Length=261, Percent_Identity=29.5019157088123, Blast_Score=71, Evalue=9e-13, Organism=Homo sapiens, GI126723750, Length=265, Percent_Identity=26.7924528301887, Blast_Score=71, Evalue=9e-13, Organism=Homo sapiens, GI224922801, Length=184, Percent_Identity=32.0652173913043, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI7705925, Length=261, Percent_Identity=25.2873563218391, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI226371731, Length=189, Percent_Identity=31.2169312169312, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI66933014, Length=217, Percent_Identity=25.8064516129032, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI10190704, Length=264, Percent_Identity=28.030303030303, Blast_Score=65, Evalue=6e-11, Organism=Escherichia coli, GI1787335, Length=260, Percent_Identity=33.4615384615385, Blast_Score=115, Evalue=2e-27, Organism=Escherichia coli, GI1789208, Length=268, Percent_Identity=33.5820895522388, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI87082100, Length=264, Percent_Identity=27.2727272727273, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1789378, Length=265, Percent_Identity=30.9433962264151, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI1790717, Length=258, Percent_Identity=23.6434108527132, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI87082160, Length=273, Percent_Identity=27.8388278388278, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1787905, Length=261, Percent_Identity=26.8199233716475, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI2367365, Length=259, Percent_Identity=28.5714285714286, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI1789057, Length=256, Percent_Identity=25.78125, Blast_Score=64, Evalue=8e-12, Organism=Caenorhabditis elegans, GI25147288, Length=260, Percent_Identity=28.4615384615385, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17561402, Length=268, Percent_Identity=27.6119402985075, Blast_Score=81, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17536025, Length=267, Percent_Identity=27.3408239700375, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17555706, Length=259, Percent_Identity=28.5714285714286, Blast_Score=77, Evalue=8e-15, Organism=Caenorhabditis elegans, GI17562906, Length=273, Percent_Identity=27.4725274725275, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17564282, Length=187, Percent_Identity=27.807486631016, Blast_Score=74, Evalue=6e-14, Organism=Caenorhabditis elegans, GI17562910, Length=274, Percent_Identity=25.9124087591241, Blast_Score=74, Evalue=9e-14, Organism=Caenorhabditis elegans, GI193203117, Length=175, Percent_Identity=29.1428571428571, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17536651, Length=261, Percent_Identity=26.8199233716475, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI193203115, Length=173, Percent_Identity=29.4797687861272, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17560676, Length=262, Percent_Identity=25.9541984732824, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17544670, Length=271, Percent_Identity=26.5682656826568, Blast_Score=71, Evalue=7e-13, Organism=Caenorhabditis elegans, GI193204405, Length=270, Percent_Identity=28.5185185185185, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17562990, Length=268, Percent_Identity=25.3731343283582, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17562904, Length=270, Percent_Identity=25.5555555555556, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17560332, Length=287, Percent_Identity=23.6933797909408, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI72000259, Length=273, Percent_Identity=27.4725274725275, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71994600, Length=254, Percent_Identity=24.8031496062992, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17560150, Length=268, Percent_Identity=25.7462686567164, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17538182, Length=267, Percent_Identity=27.7153558052434, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17531453, Length=270, Percent_Identity=26.2962962962963, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI24644339, Length=258, Percent_Identity=29.4573643410853, Blast_Score=99, Evalue=2e-21, Organism=Drosophila melanogaster, GI21357041, Length=260, Percent_Identity=28.4615384615385, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI28571526, Length=260, Percent_Identity=28.8461538461538, Blast_Score=92, Evalue=2e-19, Organism=Drosophila melanogaster, GI24639444, Length=268, Percent_Identity=29.1044776119403, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI21355319, Length=263, Percent_Identity=30.0380228136882, Blast_Score=84, Evalue=7e-17, Organism=Drosophila melanogaster, GI23397609, Length=261, Percent_Identity=29.1187739463602, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24640442, Length=196, Percent_Identity=31.1224489795918, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI24644337, Length=264, Percent_Identity=31.4393939393939, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI28574402, Length=202, Percent_Identity=32.1782178217822, Blast_Score=74, Evalue=7e-14, Organism=Drosophila melanogaster, GI24584744, Length=202, Percent_Identity=32.1782178217822, Blast_Score=74, Evalue=9e-14, Organism=Drosophila melanogaster, GI24643142, Length=258, Percent_Identity=26.3565891472868, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI17737361, Length=207, Percent_Identity=28.5024154589372, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI24584748, Length=192, Percent_Identity=29.6875, Blast_Score=64, Evalue=7e-11, Organism=Drosophila melanogaster, GI161076933, Length=192, Percent_Identity=29.6875, Blast_Score=64, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 27821; Mature: 27821
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMDLSGKKAVVTGAGGDGLGQAIANRLGGLGADIALIGRTLEKVQRRGREVEERWGVKTV CCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHCCEEEE AISADMSDWDQVHNAVREAHWQLGGLDIMVNNPVMVAGGLFETQTKEQIDFTVLGSLSMM EEECCCHHHHHHHHHHHHHHHHCCCEEEEECCCEEEECCCCCCCCHHHCCEEEHHHHHHH MYGAHAALQFLLPQGSGKIINIGSVGGRIQQRGLVVYNACKAGVIGFTRNLAHEVALRGV HHHHHHHHHHHCCCCCCCEEEECCCCCHHHHCCEEEEECCCCCHHHHHHHHHHHHHHCCC NVLGVAPGIMLNPQLKQYVLDPQDDQERAGRAAIIEAITQQVQLGRASLPEEAANMVAFL CEEECCCCCEECHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH ATEAADYLCGQTIDVAGGQWMG HHHHHHHHCCCEEECCCCCCCC >Mature Secondary Structure MMDLSGKKAVVTGAGGDGLGQAIANRLGGLGADIALIGRTLEKVQRRGREVEERWGVKTV CCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHCCEEEE AISADMSDWDQVHNAVREAHWQLGGLDIMVNNPVMVAGGLFETQTKEQIDFTVLGSLSMM EEECCCHHHHHHHHHHHHHHHHCCCEEEEECCCEEEECCCCCCCCHHHCCEEEHHHHHHH MYGAHAALQFLLPQGSGKIINIGSVGGRIQQRGLVVYNACKAGVIGFTRNLAHEVALRGV HHHHHHHHHHHCCCCCCCEEEECCCCCHHHHCCEEEEECCCCCHHHHHHHHHHHHHHCCC NVLGVAPGIMLNPQLKQYVLDPQDDQERAGRAAIIEAITQQVQLGRASLPEEAANMVAFL CEEECCCCCEECHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH ATEAADYLCGQTIDVAGGQWMG HHHHHHHHCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]