| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41407476
Identifier: 41407476
GI number: 41407476
Start: 1490424
End: 1491128
Strand: Direct
Name: 41407476
Synonym: MAP1378
Alternate gene names: NA
Gene position: 1490424-1491128 (Clockwise)
Preceding gene: 41407475
Following gene: 41407477
Centisome position: 30.86
GC content: 64.54
Gene sequence:
>705_bases GTGCCCACGGACGCCAACGGGCCGATGGAATGTCACGAACTGATGGCTCTGAGTTTCGCCTCCCACCTGTTCCAGTCGCT GGCCCAAGTTCCCACCTATTCGGCGTGGCTGGTGGCCGACGCCGACCTCACCTCGGCGCTCGCGTACGAGCGTCGGGTGC TCAAGCTGCTGGCCTGGGGTGAGCCGACGCGGCCGTGGAGGCTGAAATGCCCCTCGCACGTGCTCTGGCTTGACCGCCTG GCCGCGGTCTTCCCAGACGCCAAATTCGTGATGACGCACCGTGATCCGACGGACGTCATCCTGTCAGTCGCCGACCTCTA CGCCGACATCATCGGCCAGTTCACCGACGACATCGACCGCCCCTATATCGGGCGGCTCAACGTCGAGCATTGGTCGTTGG GCATGGCCCGCACGCTGCAGTTCCGGGCAGCGGGCAACGATAACCGGTTCTATGACATCGACTTTCGCGCGATGCAGGCC GACCCGATCGGCGAGGTGACGGGATTGTATCGCTGGCTTGGCGAACAGGTCAGCGACGAATTCGAGGGCCGAATGAACAG CTGGTGGGCGCAGGCGGCAACCGAGCGCGAACCCAGCAGCCATGCTGACCCTGTTCAGTTCGGGATCGACCTGGATTCGA TACGGCCGCTGTTCGCCGACTACATCACGGCCGCCGCCGACTGGACCGCACACGCCGACATCTAG
Upstream 100 bases:
>100_bases AAGGCCTCGAGATACTGTTGACGTCGCTGCGCGATGAGGCCCGGCTCAACGCCAAAGGTGAGGCCTTCATCTATCCGCGG ATCACCGCATACCTTGCTCA
Downstream 100 bases:
>100_bases GAGAGCCATGGCTATTGACCTCACTGGTGGCATCGACCCATCGCGCGAACTCGTGTTCGCTGAGCGTCCAGAGAACCCGG AGATGCGAGACTCGGTGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: Hydrolase
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MPTDANGPMECHELMALSFASHLFQSLAQVPTYSAWLVADADLTSALAYERRVLKLLAWGEPTRPWRLKCPSHVLWLDRL AAVFPDAKFVMTHRDPTDVILSVADLYADIIGQFTDDIDRPYIGRLNVEHWSLGMARTLQFRAAGNDNRFYDIDFRAMQA DPIGEVTGLYRWLGEQVSDEFEGRMNSWWAQAATEREPSSHADPVQFGIDLDSIRPLFADYITAAADWTAHADI
Sequences:
>Translated_234_residues MPTDANGPMECHELMALSFASHLFQSLAQVPTYSAWLVADADLTSALAYERRVLKLLAWGEPTRPWRLKCPSHVLWLDRL AAVFPDAKFVMTHRDPTDVILSVADLYADIIGQFTDDIDRPYIGRLNVEHWSLGMARTLQFRAAGNDNRFYDIDFRAMQA DPIGEVTGLYRWLGEQVSDEFEGRMNSWWAQAATEREPSSHADPVQFGIDLDSIRPLFADYITAAADWTAHADI >Mature_233_residues PTDANGPMECHELMALSFASHLFQSLAQVPTYSAWLVADADLTSALAYERRVLKLLAWGEPTRPWRLKCPSHVLWLDRLA AVFPDAKFVMTHRDPTDVILSVADLYADIIGQFTDDIDRPYIGRLNVEHWSLGMARTLQFRAAGNDNRFYDIDFRAMQAD PIGEVTGLYRWLGEQVSDEFEGRMNSWWAQAATEREPSSHADPVQFGIDLDSIRPLFADYITAAADWTAHADI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26491; Mature: 26360
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTDANGPMECHELMALSFASHLFQSLAQVPTYSAWLVADADLTSALAYERRVLKLLAWG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHCC EPTRPWRLKCPSHVLWLDRLAAVFPDAKFVMTHRDPTDVILSVADLYADIIGQFTDDIDR CCCCCEEECCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCC PYIGRLNVEHWSLGMARTLQFRAAGNDNRFYDIDFRAMQADPIGEVTGLYRWLGEQVSDE CCCCCCCCHHHHCCHHHEEEEEECCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHH FEGRMNSWWAQAATEREPSSHADPVQFGIDLDSIRPLFADYITAAADWTAHADI HHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure PTDANGPMECHELMALSFASHLFQSLAQVPTYSAWLVADADLTSALAYERRVLKLLAWG CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHCC EPTRPWRLKCPSHVLWLDRLAAVFPDAKFVMTHRDPTDVILSVADLYADIIGQFTDDIDR CCCCCEEECCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCC PYIGRLNVEHWSLGMARTLQFRAAGNDNRFYDIDFRAMQADPIGEVTGLYRWLGEQVSDE CCCCCCCCHHHHCCHHHEEEEEECCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHH FEGRMNSWWAQAATEREPSSHADPVQFGIDLDSIRPLFADYITAAADWTAHADI HHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA