Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
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Accession | NC_002944 |
Length | 4,829,781 |
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The map label for this gene is 41407456
Identifier: 41407456
GI number: 41407456
Start: 1458898
End: 1459716
Strand: Direct
Name: 41407456
Synonym: MAP1358
Alternate gene names: NA
Gene position: 1458898-1459716 (Clockwise)
Preceding gene: 41407455
Following gene: 41407457
Centisome position: 30.21
GC content: 72.04
Gene sequence:
>819_bases ATGATTGGGGGCATCGTGTCCCGGCTGGCCCGGGTCCAATTCACCGTGGGGTATGCGGCGCTGCTGCTGGCCATCAGCTG CGCCATCTTGATGCTCGGCCCGCAGGCGCATGACGTCATCGTGCAGCGCGCCAGCACCAACCTGCACAACCTGTCGCACG GCCACCTGGGCACGCTGCTGGGCAGCGCGCTGGTCGTCGACGCCGGACCGCTCTACTTCTGGCTGCCCTTTCTGACCTGT CTGCTGGCGCTGGCGGAGCTGCACCTGCGCACCATCCGGCTGGTGGTGGCGTTTCTGGTCGGCCACATCGGCGCGACGCT GCTGGTGGCCGCCGCGCTGGCAGCGTCGGTCGAGTTCGGCTGGCTGCCCGTGTCGATCACCCGGGCCAGTGACGTGGGGA TGAGCTACGGCGCGCTGGCGGTGCTGGGCGCGATGACGGCGGTGATCCCGGCGCGCTGGCGGGCCGCCTGGGTCGGCTGG TGGGTGGCGGCGGGCATCGCGTCGGCGATCGTCGGCGGCGACTTCACCGATGCCGGTCACACCGTCGCGGTGATCCTGGG CGTGCTGGTGTCGGCGCGGTTCCGCCAGCCGATCCACTGGACGCCGGCGCGCTACCTGATGCTGGCGGCGTCCTCGGGCT TCGGCTTTTTGATGCTGGCCCACCATTGGGGAACCATGGCGGCCACGCCGGTGTTCGGTCTGCTGGGCGCCGCCGTGGCC TACGCGGCGGCCAAGGCGTACACCGGCCGCGGCCTGGCGGTGACCCCGCTCGACGGCGACGACCCGCTGACCGGCCCGCA GCCGGCCGTAGCCGGCTGA
Upstream 100 bases:
>100_bases CATGCCCGCCGACTTGGCGATATATCGCCTCAAGACTCTTAAGGAGTTGTCAGCCTCCGATGACACGGACGAGACGAAAC CGCAGCCATAATGGGTGCCA
Downstream 100 bases:
>100_bases CGACCGTCGCCGCGGCGGCACGCAGCGCATCACTATGATCAGCACTCGACCCGTGCCGCGCGGAATCACCATCGTGCCCA GCCCGGCGACGATGCGGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MIGGIVSRLARVQFTVGYAALLLAISCAILMLGPQAHDVIVQRASTNLHNLSHGHLGTLLGSALVVDAGPLYFWLPFLTC LLALAELHLRTIRLVVAFLVGHIGATLLVAAALAASVEFGWLPVSITRASDVGMSYGALAVLGAMTAVIPARWRAAWVGW WVAAGIASAIVGGDFTDAGHTVAVILGVLVSARFRQPIHWTPARYLMLAASSGFGFLMLAHHWGTMAATPVFGLLGAAVA YAAAKAYTGRGLAVTPLDGDDPLTGPQPAVAG
Sequences:
>Translated_272_residues MIGGIVSRLARVQFTVGYAALLLAISCAILMLGPQAHDVIVQRASTNLHNLSHGHLGTLLGSALVVDAGPLYFWLPFLTC LLALAELHLRTIRLVVAFLVGHIGATLLVAAALAASVEFGWLPVSITRASDVGMSYGALAVLGAMTAVIPARWRAAWVGW WVAAGIASAIVGGDFTDAGHTVAVILGVLVSARFRQPIHWTPARYLMLAASSGFGFLMLAHHWGTMAATPVFGLLGAAVA YAAAKAYTGRGLAVTPLDGDDPLTGPQPAVAG >Mature_272_residues MIGGIVSRLARVQFTVGYAALLLAISCAILMLGPQAHDVIVQRASTNLHNLSHGHLGTLLGSALVVDAGPLYFWLPFLTC LLALAELHLRTIRLVVAFLVGHIGATLLVAAALAASVEFGWLPVSITRASDVGMSYGALAVLGAMTAVIPARWRAAWVGW WVAAGIASAIVGGDFTDAGHTVAVILGVLVSARFRQPIHWTPARYLMLAASSGFGFLMLAHHWGTMAATPVFGLLGAAVA YAAAKAYTGRGLAVTPLDGDDPLTGPQPAVAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28176; Mature: 28176
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGGIVSRLARVQFTVGYAALLLAISCAILMLGPQAHDVIVQRASTNLHNLSHGHLGTLL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHH GSALVVDAGPLYFWLPFLTCLLALAELHLRTIRLVVAFLVGHIGATLLVAAALAASVEFG HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC WLPVSITRASDVGMSYGALAVLGAMTAVIPARWRAAWVGWWVAAGIASAIVGGDFTDAGH CEEEEEECHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH TVAVILGVLVSARFRQPIHWTPARYLMLAASSGFGFLMLAHHWGTMAATPVFGLLGAAVA HHHHHHHHHHHHHHCCCCCCCHHHHEEEEECCCCCEEHHHHHCCHHHHHHHHHHHHHHHH YAAAKAYTGRGLAVTPLDGDDPLTGPQPAVAG HHHHHHHCCCCEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure MIGGIVSRLARVQFTVGYAALLLAISCAILMLGPQAHDVIVQRASTNLHNLSHGHLGTLL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHH GSALVVDAGPLYFWLPFLTCLLALAELHLRTIRLVVAFLVGHIGATLLVAAALAASVEFG HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC WLPVSITRASDVGMSYGALAVLGAMTAVIPARWRAAWVGWWVAAGIASAIVGGDFTDAGH CEEEEEECHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH TVAVILGVLVSARFRQPIHWTPARYLMLAASSGFGFLMLAHHWGTMAATPVFGLLGAAVA HHHHHHHHHHHHHHCCCCCCCHHHHEEEEECCCCCEEHHHHHCCHHHHHHHHHHHHHHHH YAAAKAYTGRGLAVTPLDGDDPLTGPQPAVAG HHHHHHHCCCCEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA