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The map label for this gene is 41407421

Identifier: 41407421

GI number: 41407421

Start: 1415438

End: 1416067

Strand: Direct

Name: 41407421

Synonym: MAP1323

Alternate gene names: NA

Gene position: 1415438-1416067 (Clockwise)

Preceding gene: 41407420

Following gene: 41407422

Centisome position: 29.31

GC content: 73.17

Gene sequence:

>630_bases
ATGCCTGCGGCGAGACGCCGTCGCGGTCGCCCGGCCGGTTCCCGGGTCGATCCCGACGAGCGGCGCACCGCGCTTCTCGA
CGCCGCCGAGCGGGCCATCCGGGCCAAGGGCCCGTCCGCCGGGCTGGTCGACATCGCCGGTGAGGCGGGCTTCGTCCGGT
CGGCGGTCTACGCGATGTATCCCGGGCGGGACGCGCTGCTGGCCGAGCTGAGCCGGCGAACCGCGCAGCGGCTGCTCGGC
GAAATCACCACGCGCGCAGCGGGTTCCACCGATCTACGGCAGCGGATGGCGCTGTTCTTCGACGTGATCAGCGCGTGGAT
GCAGGCCGAGCCCAACCTGTACCGGGCGCTGACCGGCGACCCGTCCACCAGCGTCTTCGAACAGCTGGCCGGGGCGGTCG
AACAGATGCTGACGACCTCCTCGGGGTCGGAGCAGGCCCGCCGGGCGGCCGCGCCGTGGTCGCGGGCCATCGTCGGGTCG
GCGGTGTCGGCCGCCGAATGGTGGTGCCGCGCCGGCACCATGCCCCGCGCCGAGCTCGTCGAACACCTGACCGCGCTGTG
CTGGGACGGCGGCGCGGCGCTGCCGTTCGACGCCGACGACATCAGAACCATTGACAGCGGACCCCATTAA

Upstream 100 bases:

>100_bases
CGACAAGATGGGCGGCGCCTACCCGCTCGACGTCCCGCTGGAGGTGTCCGTGGGCTACGGCCGCAGCTGGGACGCTGCGG
CGCATTGAGGACCACCGCCC

Downstream 100 bases:

>100_bases
TAAACACACTGTCTTTTATGGTTCTGGCAGACGTGCAAGCGCCGTCGCGCTACTGGGAAAACATCGCCGGCGAAACCGAC
CTCGACGTCACCGACATCAC

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulatory Protein; TetR-Family Transcriptional Regulator; Transcriptional Regulator TetR Family

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MPAARRRRGRPAGSRVDPDERRTALLDAAERAIRAKGPSAGLVDIAGEAGFVRSAVYAMYPGRDALLAELSRRTAQRLLG
EITTRAAGSTDLRQRMALFFDVISAWMQAEPNLYRALTGDPSTSVFEQLAGAVEQMLTTSSGSEQARRAAAPWSRAIVGS
AVSAAEWWCRAGTMPRAELVEHLTALCWDGGAALPFDADDIRTIDSGPH

Sequences:

>Translated_209_residues
MPAARRRRGRPAGSRVDPDERRTALLDAAERAIRAKGPSAGLVDIAGEAGFVRSAVYAMYPGRDALLAELSRRTAQRLLG
EITTRAAGSTDLRQRMALFFDVISAWMQAEPNLYRALTGDPSTSVFEQLAGAVEQMLTTSSGSEQARRAAAPWSRAIVGS
AVSAAEWWCRAGTMPRAELVEHLTALCWDGGAALPFDADDIRTIDSGPH
>Mature_208_residues
PAARRRRGRPAGSRVDPDERRTALLDAAERAIRAKGPSAGLVDIAGEAGFVRSAVYAMYPGRDALLAELSRRTAQRLLGE
ITTRAAGSTDLRQRMALFFDVISAWMQAEPNLYRALTGDPSTSVFEQLAGAVEQMLTTSSGSEQARRAAAPWSRAIVGSA
VSAAEWWCRAGTMPRAELVEHLTALCWDGGAALPFDADDIRTIDSGPH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22483; Mature: 22351

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAARRRRGRPAGSRVDPDERRTALLDAAERAIRAKGPSAGLVDIAGEAGFVRSAVYAMY
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHC
PGRDALLAELSRRTAQRLLGEITTRAAGSTDLRQRMALFFDVISAWMQAEPNLYRALTGD
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEHCCCC
PSTSVFEQLAGAVEQMLTTSSGSEQARRAAAPWSRAIVGSAVSAAEWWCRAGTMPRAELV
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH
EHLTALCWDGGAALPFDADDIRTIDSGPH
HHHHHHHHCCCCCCCCCCHHCCCCCCCCC
>Mature Secondary Structure 
PAARRRRGRPAGSRVDPDERRTALLDAAERAIRAKGPSAGLVDIAGEAGFVRSAVYAMY
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHC
PGRDALLAELSRRTAQRLLGEITTRAAGSTDLRQRMALFFDVISAWMQAEPNLYRALTGD
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEHCCCC
PSTSVFEQLAGAVEQMLTTSSGSEQARRAAAPWSRAIVGSAVSAAEWWCRAGTMPRAELV
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH
EHLTALCWDGGAALPFDADDIRTIDSGPH
HHHHHHHHCCCCCCCCCCHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA