| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41407361
Identifier: 41407361
GI number: 41407361
Start: 1345604
End: 1346041
Strand: Direct
Name: 41407361
Synonym: MAP1263
Alternate gene names: NA
Gene position: 1345604-1346041 (Clockwise)
Preceding gene: 41407360
Following gene: 41407362
Centisome position: 27.86
GC content: 67.35
Gene sequence:
>438_bases ATGCCGCTTTCAGGTGAATACGCACCCAGCCCGTGGGATTGGTCCCGCGAGCAAGCCGACAAGTACGTCGCATCGGGCGG GGCCGAGGCCGCCGACATGAAGGACAAGCCCATCATCGTGCTGACCACGGTCGGCGCCAAGACCGGCAAGCTGCGCAGGA CGCCGCTGATGCGGGTCGAGCACGACGGGCAGTACGCCGTCGTCGCCTCGCTCGGCGGGGCGCCGAAGAACCCGGTCTGG TACCACAACATCAAGAAGAACCCCCGCGTCGAACTGCAGGACGGCCCGGTCACCCGGGAGTACGACGCCCGGGAGGTGTT CGGCGACGAGAAGGCCGTCTGGTGGCAGCGGGCCGTCGAAGCCTGGCCCGACTACGCCGAATACCAGACCAAAACCGACC GCCAGATCCCGGTATTCGTGCTGACCCCGGTCGCCTGA
Upstream 100 bases:
>100_bases ACCCGGGGCGCCCGACCACCAGACCCGGCGCCGTCTGCGTTCGTTCGTCGCGCGCCCGGCCGTCGGGCCGCCCCACCCGG ACCGCGCTTAAGGTTGTGTC
Downstream 100 bases:
>100_bases ATTCCGTAGTTGACCAGCCCGCATGGCACCATTAGTCCGTGTCCGCCGAATTGAGCCAGTCCCCGAGCGTCGCGCCGCTT TCAGCGGCTGACATCGACGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MPLSGEYAPSPWDWSREQADKYVASGGAEAADMKDKPIIVLTTVGAKTGKLRRTPLMRVEHDGQYAVVASLGGAPKNPVW YHNIKKNPRVELQDGPVTREYDAREVFGDEKAVWWQRAVEAWPDYAEYQTKTDRQIPVFVLTPVA
Sequences:
>Translated_145_residues MPLSGEYAPSPWDWSREQADKYVASGGAEAADMKDKPIIVLTTVGAKTGKLRRTPLMRVEHDGQYAVVASLGGAPKNPVW YHNIKKNPRVELQDGPVTREYDAREVFGDEKAVWWQRAVEAWPDYAEYQTKTDRQIPVFVLTPVA >Mature_144_residues PLSGEYAPSPWDWSREQADKYVASGGAEAADMKDKPIIVLTTVGAKTGKLRRTPLMRVEHDGQYAVVASLGGAPKNPVWY HNIKKNPRVELQDGPVTREYDAREVFGDEKAVWWQRAVEAWPDYAEYQTKTDRQIPVFVLTPVA
Specific function: May be involved in the activation of oxazole analogs [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the deazaflavin-dependent nitroreductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004378 [H]
Pfam domain/function: PF04075 DUF385 [H]
EC number: NA
Molecular weight: Translated: 16330; Mature: 16198
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLSGEYAPSPWDWSREQADKYVASGGAEAADMKDKPIIVLTTVGAKTGKLRRTPLMRVE CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCEECCCEEEEE HDGQYAVVASLGGAPKNPVWYHNIKKNPRVELQDGPVTREYDAREVFGDEKAVWWQRAVE CCCCEEEEEECCCCCCCCEEEECCCCCCCEEECCCCCCCCCCHHHHCCCCHHHHHHHHHH AWPDYAEYQTKTDRQIPVFVLTPVA HCCCCHHHCCCCCCCCCEEEEECCC >Mature Secondary Structure PLSGEYAPSPWDWSREQADKYVASGGAEAADMKDKPIIVLTTVGAKTGKLRRTPLMRVE CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCEECCCEEEEE HDGQYAVVASLGGAPKNPVWYHNIKKNPRVELQDGPVTREYDAREVFGDEKAVWWQRAVE CCCCEEEEEECCCCCCCCEEEECCCCCCCEEECCCCCCCCCCHHHHCCCCHHHHHHHHHH AWPDYAEYQTKTDRQIPVFVLTPVA HCCCCHHHCCCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]