| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41407360
Identifier: 41407360
GI number: 41407360
Start: 1344806
End: 1345594
Strand: Direct
Name: 41407360
Synonym: MAP1262
Alternate gene names: NA
Gene position: 1344806-1345594 (Clockwise)
Preceding gene: 41407359
Following gene: 41407361
Centisome position: 27.84
GC content: 68.06
Gene sequence:
>789_bases ATGACGGAGCAGTCCGAGGGGCCGCAGCGCCCGTTGATCGGGTACATCACCCATGACATCGCGCCGCAGATCGCCCCCGC GCCGATCGGGCGCGCCTGGATGTCGCAGATGCGCCAGGGCTGGCCACACCGATGCCTGCCGATGTTGATCGCCAACCAGA GCGGCTGGGAGGTGCGCAACCGCAGCGCCTTCACCGCGACGTGGATGGGCGGTGATGATCGCACCAGCCTGACGATCGTG CCCGACACCCGTGCCAGCGGTCAGTTTTTGCCGGACAGTCACTTCGGCTTCGGCATCCTGACCTGGCATCTGCCGATCCT GTTCCGCACCCCGCCGGGCTACAACCTGTTGGTCCGCGGACCGGCCAACCATCCCAAGGACGCGATATCGCCGTTGGAGG GCATCGTCGAAACCGATTGGTCCAGTTCGAGTTTCAGCATGAACTGGAAATTCACCCGGGAATTCATGCCGGTGCGGTTC GAGGTGGACGAGCCGATCTGCATGATCGTGCCGCAGCGGCGGGCCGAGCTGGAGGAGTTCGCCCCGGAACTGCGGCCCAT CGAGTCCGACGAAGAACTGCACCGCAAGCACGAGTTCTTCCTGAGCTCGCGCGGCGCGCTGGGGCGCGAGCAGGAAGTGG CCGACGAGCGCGTGCCGTGGCAGGGCGACTACACCCGCGGCCGGCACAGCGACGGCGAACCCGGGGCGCCCGACCACCAG ACCCGGCGCCGTCTGCGTTCGTTCGTCGCGCGCCCGGCCGTCGGGCCGCCCCACCCGGACCGCGCTTAA
Upstream 100 bases:
>100_bases CGAAACGTTCACGTCCGGTCCCGATACTGTGCCGCGCGCGCCGACGCCCGGCGTGCGCTATGCCTGTAGGGGACCAGCGA GCCGGTGAAGCGAGGATCTG
Downstream 100 bases:
>100_bases GGTTGTGTCATGCCGCTTTCAGGTGAATACGCACCCAGCCCGTGGGATTGGTCCCGCGAGCAAGCCGACAAGTACGTCGC ATCGGGCGGGGCCGAGGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MTEQSEGPQRPLIGYITHDIAPQIAPAPIGRAWMSQMRQGWPHRCLPMLIANQSGWEVRNRSAFTATWMGGDDRTSLTIV PDTRASGQFLPDSHFGFGILTWHLPILFRTPPGYNLLVRGPANHPKDAISPLEGIVETDWSSSSFSMNWKFTREFMPVRF EVDEPICMIVPQRRAELEEFAPELRPIESDEELHRKHEFFLSSRGALGREQEVADERVPWQGDYTRGRHSDGEPGAPDHQ TRRRLRSFVARPAVGPPHPDRA
Sequences:
>Translated_262_residues MTEQSEGPQRPLIGYITHDIAPQIAPAPIGRAWMSQMRQGWPHRCLPMLIANQSGWEVRNRSAFTATWMGGDDRTSLTIV PDTRASGQFLPDSHFGFGILTWHLPILFRTPPGYNLLVRGPANHPKDAISPLEGIVETDWSSSSFSMNWKFTREFMPVRF EVDEPICMIVPQRRAELEEFAPELRPIESDEELHRKHEFFLSSRGALGREQEVADERVPWQGDYTRGRHSDGEPGAPDHQ TRRRLRSFVARPAVGPPHPDRA >Mature_261_residues TEQSEGPQRPLIGYITHDIAPQIAPAPIGRAWMSQMRQGWPHRCLPMLIANQSGWEVRNRSAFTATWMGGDDRTSLTIVP DTRASGQFLPDSHFGFGILTWHLPILFRTPPGYNLLVRGPANHPKDAISPLEGIVETDWSSSSFSMNWKFTREFMPVRFE VDEPICMIVPQRRAELEEFAPELRPIESDEELHRKHEFFLSSRGALGREQEVADERVPWQGDYTRGRHSDGEPGAPDHQT RRRLRSFVARPAVGPPHPDRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29836; Mature: 29705
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEQSEGPQRPLIGYITHDIAPQIAPAPIGRAWMSQMRQGWPHRCLPMLIANQSGWEVRN CCCCCCCCCCCEEEHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHHEEECCCCCCCCC RSAFTATWMGGDDRTSLTIVPDTRASGQFLPDSHFGFGILTWHLPILFRTPPGYNLLVRG CCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEEC PANHPKDAISPLEGIVETDWSSSSFSMNWKFTREFMPVRFEVDEPICMIVPQRRAELEEF CCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEECCCCEEEECCCHHHHHHHH APELRPIESDEELHRKHEFFLSSRGALGREQEVADERVPWQGDYTRGRHSDGEPGAPDHQ HHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHH TRRRLRSFVARPAVGPPHPDRA HHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TEQSEGPQRPLIGYITHDIAPQIAPAPIGRAWMSQMRQGWPHRCLPMLIANQSGWEVRN CCCCCCCCCCEEEHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHHEEECCCCCCCCC RSAFTATWMGGDDRTSLTIVPDTRASGQFLPDSHFGFGILTWHLPILFRTPPGYNLLVRG CCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEEC PANHPKDAISPLEGIVETDWSSSSFSMNWKFTREFMPVRFEVDEPICMIVPQRRAELEEF CCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEECCCCEEEECCCHHHHHHHH APELRPIESDEELHRKHEFFLSSRGALGREQEVADERVPWQGDYTRGRHSDGEPGAPDHQ HHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHH TRRRLRSFVARPAVGPPHPDRA HHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA