| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41407342
Identifier: 41407342
GI number: 41407342
Start: 1322077
End: 1323195
Strand: Direct
Name: 41407342
Synonym: MAP1244
Alternate gene names: NA
Gene position: 1322077-1323195 (Clockwise)
Preceding gene: 41407341
Following gene: 41407343
Centisome position: 27.37
GC content: 72.65
Gene sequence:
>1119_bases ATGAGAACCAGGGTCGCCGAGTTGCTCGGGGTGGAATTCCCGATCTGCGCGTTCAGCCACTGCCGCGACGTGGTGGCCGC GGTGACCAATGCGGGTGGATTCGGCATCCTGGGCGCCACCGCGCACAGCCCGCAGCGGCTGGACAACGAACTGAACTGGA TCGAGCAGCAGACCGGCGGCAAGCCCTACGGCGTCGACCTGTTGCTGCCACCCAAATACGTCGGCGCCGAGCAGGGCGGC ATCGACGCCGGCCAGGCCCGCACCCTGCTGCCCGACGAGCACCGCGCGTTCGTCGACGACCTGCTGGCCCGCTACGGGGT GACCGCGCCCGCCGCGGACATCCGTGCCGGCGGGCTGAACATCTCGCCCAAGACCTACCAGCCGCTGCTCGACGTGGCCT TCGCCCACGACATCCGGCTCATCGCCTCCGCGCTCGGCCCGCCCCCGCCCGACCTCGTCGAACGCGCGCACGACCGCGAT GTGCTGGTGGCCGCGCTGGCCGGCACCACCGCGCACGCCCAACGGCACGCCGCCGCCGGGGTGGACCTGATCGTCGCGCA GGGCACCGAGGCGGGCGGGCACACCGGTGAGGTGGCGACCATGGTCCTGGTGCCCGAAGTGGTCGACGCCGTCGCGCCGG TGCCGGTGCTGGCCGCGGGCGGCATCGCCCGCGGCCGCCAGATCGCGGCGGCCCTGGCGCTGGGCGCCGAGGGCGTGTGG TGCGGGTCGGTGTGGCTGACCACCGAGGAGGCCGAGACGGTGCCGGTGGTCAAGGAGAAGTTCCTGGCCGCCACCTCCTC CGACACCGTGCGGTCGCGCTCGATGACGGGCAAGCCGGCCCGGATGCTGCGCACCGCGTGGACCGACGAGTGGGACCGCC CGGAAAACCCCGACCCGCTGGGCATGCCGCTGCAGACCGCGCTGATCACCGAGCCGCAGCTGCGGATCAACGCCGCCGCC ACCCAGCCGGGTGCCAAGGCCCGCGAGCTGGCCACCTACTTCGTCGGGCAGGTGGTGGGCTCGCTGGACCGGATCTGCCC CACCCGCTCGGTGGTGCTGGACATGGTCGAGGAGTTCATCGACACCGTCGGACGGCTCGACGGCCTGATCGAGAACTGA
Upstream 100 bases:
>100_bases CGAGCTGGCCTCCGGACGGCCGGGAGCCCGCGAGCTGACGCCGAATCACCCACGGCCGTAACCGATTGACTTCTCTGTCG AGAGCTCTTAGCGTCGGGCA
Downstream 100 bases:
>100_bases TCGGCCATCGCCATACGGCCAGGTCAGCGCCGGTAGCTGACCGAATGCTGTGGGCGCCCCCACGGAACGCGTAAAGAATC GCGGACACGCTGGCGGGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MRTRVAELLGVEFPICAFSHCRDVVAAVTNAGGFGILGATAHSPQRLDNELNWIEQQTGGKPYGVDLLLPPKYVGAEQGG IDAGQARTLLPDEHRAFVDDLLARYGVTAPAADIRAGGLNISPKTYQPLLDVAFAHDIRLIASALGPPPPDLVERAHDRD VLVAALAGTTAHAQRHAAAGVDLIVAQGTEAGGHTGEVATMVLVPEVVDAVAPVPVLAAGGIARGRQIAAALALGAEGVW CGSVWLTTEEAETVPVVKEKFLAATSSDTVRSRSMTGKPARMLRTAWTDEWDRPENPDPLGMPLQTALITEPQLRINAAA TQPGAKARELATYFVGQVVGSLDRICPTRSVVLDMVEEFIDTVGRLDGLIEN
Sequences:
>Translated_372_residues MRTRVAELLGVEFPICAFSHCRDVVAAVTNAGGFGILGATAHSPQRLDNELNWIEQQTGGKPYGVDLLLPPKYVGAEQGG IDAGQARTLLPDEHRAFVDDLLARYGVTAPAADIRAGGLNISPKTYQPLLDVAFAHDIRLIASALGPPPPDLVERAHDRD VLVAALAGTTAHAQRHAAAGVDLIVAQGTEAGGHTGEVATMVLVPEVVDAVAPVPVLAAGGIARGRQIAAALALGAEGVW CGSVWLTTEEAETVPVVKEKFLAATSSDTVRSRSMTGKPARMLRTAWTDEWDRPENPDPLGMPLQTALITEPQLRINAAA TQPGAKARELATYFVGQVVGSLDRICPTRSVVLDMVEEFIDTVGRLDGLIEN >Mature_372_residues MRTRVAELLGVEFPICAFSHCRDVVAAVTNAGGFGILGATAHSPQRLDNELNWIEQQTGGKPYGVDLLLPPKYVGAEQGG IDAGQARTLLPDEHRAFVDDLLARYGVTAPAADIRAGGLNISPKTYQPLLDVAFAHDIRLIASALGPPPPDLVERAHDRD VLVAALAGTTAHAQRHAAAGVDLIVAQGTEAGGHTGEVATMVLVPEVVDAVAPVPVLAAGGIARGRQIAAALALGAEGVW CGSVWLTTEEAETVPVVKEKFLAATSSDTVRSRSMTGKPARMLRTAWTDEWDRPENPDPLGMPLQTALITEPQLRINAAA TQPGAKARELATYFVGQVVGSLDRICPTRSVVLDMVEEFIDTVGRLDGLIEN
Specific function: Unknown
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: NA
Molecular weight: Translated: 39253; Mature: 39253
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTRVAELLGVEFPICAFSHCRDVVAAVTNAGGFGILGATAHSPQRLDNELNWIEQQTGG CCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHCCC KPYGVDLLLPPKYVGAEQGGIDAGQARTLLPDEHRAFVDDLLARYGVTAPAADIRAGGLN CCCCEEEEECCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHCCCCCC ISPKTYQPLLDVAFAHDIRLIASALGPPPPDLVERAHDRDVLVAALAGTTAHAQRHAAAG CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEEHHCCHHHHHHHHHCC VDLIVAQGTEAGGHTGEVATMVLVPEVVDAVAPVPVLAAGGIARGRQIAAALALGAEGVW CEEEEECCCCCCCCCCCHHHEEEHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHCCCCEE CGSVWLTTEEAETVPVVKEKFLAATSSDTVRSRSMTGKPARMLRTAWTDEWDRPENPDPL ECEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCC GMPLQTALITEPQLRINAAATQPGAKARELATYFVGQVVGSLDRICPTRSVVLDMVEEFI CCCHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH DTVGRLDGLIEN HHHHHHHHHCCC >Mature Secondary Structure MRTRVAELLGVEFPICAFSHCRDVVAAVTNAGGFGILGATAHSPQRLDNELNWIEQQTGG CCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHCCC KPYGVDLLLPPKYVGAEQGGIDAGQARTLLPDEHRAFVDDLLARYGVTAPAADIRAGGLN CCCCEEEEECCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHCCCCCC ISPKTYQPLLDVAFAHDIRLIASALGPPPPDLVERAHDRDVLVAALAGTTAHAQRHAAAG CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEEHHCCHHHHHHHHHCC VDLIVAQGTEAGGHTGEVATMVLVPEVVDAVAPVPVLAAGGIARGRQIAAALALGAEGVW CEEEEECCCCCCCCCCCHHHEEEHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHCCCCEE CGSVWLTTEEAETVPVVKEKFLAATSSDTVRSRSMTGKPARMLRTAWTDEWDRPENPDPL ECEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCC GMPLQTALITEPQLRINAAATQPGAKARELATYFVGQVVGSLDRICPTRSVVLDMVEEFI CCCHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH DTVGRLDGLIEN HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230 [H]