Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41407341

Identifier: 41407341

GI number: 41407341

Start: 1321445

End: 1322014

Strand: Direct

Name: 41407341

Synonym: MAP1243

Alternate gene names: NA

Gene position: 1321445-1322014 (Clockwise)

Preceding gene: 41407340

Following gene: 41407342

Centisome position: 27.36

GC content: 69.12

Gene sequence:

>570_bases
ATGCCCACAATGCGCCTGCCCAAACTGCCCCTGGACGAAGCCAAGGCCGCCGCCGACGAAGCAGCCGTGCCCAACTACAT
GGCCGAGCTCAGCATCTTCCAGGTGCTGCTCAACCATCCGCCGCTGGCCCGTGCCATCAACGACCTGCTCGCCACCATGC
TCTGGCACGGCGCGCTGGATTCCCGGTTGCGCGAATTGGTCATCATGCGCATCGGCTGGCTCACCGGCTGCGACTACGAG
TGGACGCAGCACTGGCGGGTCGCGTCCCGGCTCGGCGTGCCCGGCGACGATCTGCTCGGGGTGCGAGATTGGCGGAACTA
CCCGGGGTTTGGGCCCACCGAGCGGGCCGTGCTGGCCGCCACCGACGACGTGGTGCGCCACGGCTCGGTCAGCGCCGCCA
GCTGGGCGCAGTGCGAGCACGAATTCAACGGGGACACAACGGTTCTCGTTGAGCTGGTCACGGTCATCGGCGCGTGGCGG
ATGGTCGCCTCGATCCTGCAGAGCCTCGAGGTGCCGTTGGAGGACGGGGTGGCGAGCTGGCCTCCGGACGGCCGGGAGCC
CGCGAGCTGA

Upstream 100 bases:

>100_bases
CTCTGGTGATAGGTGCGCGGGCCGTCGTCGCCGCGCCCGGCGCTGGCTACCATGACCGTAGAACGCGACGGTCCCGCCAG
TACCGAGGAGTGCTCACCCG

Downstream 100 bases:

>100_bases
CGCCGAATCACCCACGGCCGTAACCGATTGACTTCTCTGTCGAGAGCTCTTAGCGTCGGGCAATGAGAACCAGGGTCGCC
GAGTTGCTCGGGGTGGAATT

Product: hypothetical protein

Products: NA

Alternate protein names: Carboxymuconolactone Decarboxylase Family; Alkylhydroperoxidase AhpD Family Core Domain-Containing; Alkylhydroperoxidase

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MPTMRLPKLPLDEAKAAADEAAVPNYMAELSIFQVLLNHPPLARAINDLLATMLWHGALDSRLRELVIMRIGWLTGCDYE
WTQHWRVASRLGVPGDDLLGVRDWRNYPGFGPTERAVLAATDDVVRHGSVSAASWAQCEHEFNGDTTVLVELVTVIGAWR
MVASILQSLEVPLEDGVASWPPDGREPAS

Sequences:

>Translated_189_residues
MPTMRLPKLPLDEAKAAADEAAVPNYMAELSIFQVLLNHPPLARAINDLLATMLWHGALDSRLRELVIMRIGWLTGCDYE
WTQHWRVASRLGVPGDDLLGVRDWRNYPGFGPTERAVLAATDDVVRHGSVSAASWAQCEHEFNGDTTVLVELVTVIGAWR
MVASILQSLEVPLEDGVASWPPDGREPAS
>Mature_188_residues
PTMRLPKLPLDEAKAAADEAAVPNYMAELSIFQVLLNHPPLARAINDLLATMLWHGALDSRLRELVIMRIGWLTGCDYEW
TQHWRVASRLGVPGDDLLGVRDWRNYPGFGPTERAVLAATDDVVRHGSVSAASWAQCEHEFNGDTTVLVELVTVIGAWRM
VASILQSLEVPLEDGVASWPPDGREPAS

Specific function: Unknown

COG id: COG2128

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20849; Mature: 20718

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTMRLPKLPLDEAKAAADEAAVPNYMAELSIFQVLLNHPPLARAINDLLATMLWHGALD
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
SRLRELVIMRIGWLTGCDYEWTQHWRVASRLGVPGDDLLGVRDWRNYPGFGPTERAVLAA
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHCCCHHHCCCCCCCCCCCEEEHH
TDDVVRHGSVSAASWAQCEHEFNGDTTVLVELVTVIGAWRMVASILQSLEVPLEDGVASW
HHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCC
PPDGREPAS
CCCCCCCCC
>Mature Secondary Structure 
PTMRLPKLPLDEAKAAADEAAVPNYMAELSIFQVLLNHPPLARAINDLLATMLWHGALD
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
SRLRELVIMRIGWLTGCDYEWTQHWRVASRLGVPGDDLLGVRDWRNYPGFGPTERAVLAA
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHCCCHHHCCCCCCCCCCCEEEHH
TDDVVRHGSVSAASWAQCEHEFNGDTTVLVELVTVIGAWRMVASILQSLEVPLEDGVASW
HHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCC
PPDGREPAS
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA