| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is mshB [H]
Identifier: 41407127
GI number: 41407127
Start: 1074188
End: 1075078
Strand: Direct
Name: mshB [H]
Synonym: MAP1029
Alternate gene names: 41407127
Gene position: 1074188-1075078 (Clockwise)
Preceding gene: 41407124
Following gene: 41407128
Centisome position: 22.24
GC content: 68.69
Gene sequence:
>891_bases GTGAGCGAATTGCGGTTGATGGCGGTGCACGCCCATCCCGACGACGAGTCCAGCAAGGGCGCGGCGACCCTGGCCCGCTA CGCCGACGAGGGCCATCGGGTGCTGGTGGTGACGTTAACCGGCGGCGAGCGCGGCGACATCCTCAACCCGGCGATGGACC TGCCCGAGGTGCACGGCCACATCGCCGAAATCCGGCGCGACGAAATGGCCAAGGCCGCCGAGATACTCGGCGTCGAGCAC ACCTGGCTGGGGTTCGTCGACTCCGGATTGCCCAAGGGCGACCCGCCGCCGCCGCTGCCCGAGGGATGCTTCGCGCTGGT GCCGCTGGAGGAGGCGATCGAGGCGCTGGTCCGCGTGGTCCGCGAATTCCGGCCGCACGTGATGACCACCTACGACGAAA CCGGCGGCTACCCGCATCCCGATCACATTCGCTGCCACCAGGTTTCGGTCGGCGCCTACGAGGCGGCCGGCGACTACCGG CGCTTCCCGGACGCCGGCGAGCCGTGGACGGTGTCCAAGCTGTACTACAACCACGGCTTCCTGCGGGCGCGGATGCAGCT GCTGCACGACGAAGCGGTCAAACACGGTCACGAACCGCCGTTCAAGAAGTGGCTCGAGCATTGGGATCCCGCCCACGACC CGTTCGAGTCCCGCGTCACCACCCGCGTGGAATGCTCGGCCTATTTCAGCCAGCGCGACGACGCGCTGCGGGCGCACACC ACCCAGATCGACCCGGACCACGACTTCTTCGCCGCCCCCATCGCATGGCAGCAACGGCTTTGGCCCACTGAGGAATTCGA GTTGGCCCGCTCCCGGGTCCCGGTCCGGTTGCCCGAAGACGACCTGTGCGCCAGGGCGCCAGGCTGGCCACGGCGTTTCA CCCCGAGATGA
Upstream 100 bases:
>100_bases CCTGGTCATTGGGCGCCGGCAGCGGCCGGCAGCGGGCACGGATGCGGAACTGGAATTATAGGGTCAGATCGGGCGACCAC CGGAAGTGACAAGGGAGCAC
Downstream 100 bases:
>100_bases CCGGCGACCGGCGCATCCACCGGCTGTTCGTCGACCTGGTCACCGGGGTGGTCTGAGCGCCGGCCGTCACGCTGGCGTGA CGCTCGGCGACGACGGTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: GlcNAc-Ins deacetylase; N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase [H]
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MSELRLMAVHAHPDDESSKGAATLARYADEGHRVLVVTLTGGERGDILNPAMDLPEVHGHIAEIRRDEMAKAAEILGVEH TWLGFVDSGLPKGDPPPPLPEGCFALVPLEEAIEALVRVVREFRPHVMTTYDETGGYPHPDHIRCHQVSVGAYEAAGDYR RFPDAGEPWTVSKLYYNHGFLRARMQLLHDEAVKHGHEPPFKKWLEHWDPAHDPFESRVTTRVECSAYFSQRDDALRAHT TQIDPDHDFFAAPIAWQQRLWPTEEFELARSRVPVRLPEDDLCARAPGWPRRFTPR
Sequences:
>Translated_296_residues MSELRLMAVHAHPDDESSKGAATLARYADEGHRVLVVTLTGGERGDILNPAMDLPEVHGHIAEIRRDEMAKAAEILGVEH TWLGFVDSGLPKGDPPPPLPEGCFALVPLEEAIEALVRVVREFRPHVMTTYDETGGYPHPDHIRCHQVSVGAYEAAGDYR RFPDAGEPWTVSKLYYNHGFLRARMQLLHDEAVKHGHEPPFKKWLEHWDPAHDPFESRVTTRVECSAYFSQRDDALRAHT TQIDPDHDFFAAPIAWQQRLWPTEEFELARSRVPVRLPEDDLCARAPGWPRRFTPR >Mature_295_residues SELRLMAVHAHPDDESSKGAATLARYADEGHRVLVVTLTGGERGDILNPAMDLPEVHGHIAEIRRDEMAKAAEILGVEHT WLGFVDSGLPKGDPPPPLPEGCFALVPLEEAIEALVRVVREFRPHVMTTYDETGGYPHPDHIRCHQVSVGAYEAAGDYRR FPDAGEPWTVSKLYYNHGFLRARMQLLHDEAVKHGHEPPFKKWLEHWDPAHDPFESRVTTRVECSAYFSQRDDALRAHTT QIDPDHDFFAAPIAWQQRLWPTEEFELARSRVPVRLPEDDLCARAPGWPRRFTPR
Specific function: Catalyzes the deacetylation of 1D-myo-inositol 2- acetamido-2-deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway [H]
COG id: COG2120
COG function: function code S; Uncharacterized proteins, LmbE homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MshB deacetylase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003737 - InterPro: IPR017810 [H]
Pfam domain/function: PF02585 PIG-L [H]
EC number: =3.5.1.103 [H]
Molecular weight: Translated: 33634; Mature: 33503
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELRLMAVHAHPDDESSKGAATLARYADEGHRVLVVTLTGGERGDILNPAMDLPEVHGH CCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHH IAEIRRDEMAKAAEILGVEHTWLGFVDSGLPKGDPPPPLPEGCFALVPLEEAIEALVRVV HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHH REFRPHVMTTYDETGGYPHPDHIRCHQVSVGAYEAAGDYRRFPDAGEPWTVSKLYYNHGF HHHCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCHHCCCCCCCCEEEHHHHHHCHH LRARMQLLHDEAVKHGHEPPFKKWLEHWDPAHDPFESRVTTRVECSAYFSQRDDALRAHT HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHCEEEEHHHHHHHCCCHHHHHHC TQIDPDHDFFAAPIAWQQRLWPTEEFELARSRVPVRLPEDDLCARAPGWPRRFTPR CCCCCCCCEEECCHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCC >Mature Secondary Structure SELRLMAVHAHPDDESSKGAATLARYADEGHRVLVVTLTGGERGDILNPAMDLPEVHGH CCEEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHH IAEIRRDEMAKAAEILGVEHTWLGFVDSGLPKGDPPPPLPEGCFALVPLEEAIEALVRVV HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHH REFRPHVMTTYDETGGYPHPDHIRCHQVSVGAYEAAGDYRRFPDAGEPWTVSKLYYNHGF HHHCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCHHCCCCCCCCEEEHHHHHHCHH LRARMQLLHDEAVKHGHEPPFKKWLEHWDPAHDPFESRVTTRVECSAYFSQRDDALRAHT HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHCEEEEHHHHHHHCCCHHHHHHC TQIDPDHDFFAAPIAWQQRLWPTEEFELARSRVPVRLPEDDLCARAPGWPRRFTPR CCCCCCCCEEECCHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA