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The map label for this gene is yebC [C]

Identifier: 41407128

GI number: 41407128

Start: 1075262

End: 1076014

Strand: Direct

Name: yebC [C]

Synonym: MAP1030

Alternate gene names: 41407128

Gene position: 1075262-1076014 (Clockwise)

Preceding gene: 41407127

Following gene: 41407131

Centisome position: 22.26

GC content: 67.73

Gene sequence:

>753_bases
ATGAGCGGCCATTCCAAGTGGGCCACCACCAAGCACAAGAAGGCCGTCATCGACGCCCGCCGCGGCAAGATGTTCGCCCG
GCTGATCAAGAACATCGAGGTCGCGGCCCGCGTCGGTGGCGGTGATCCGGCGGGCAACCCGACGCTCTACGACGCGATCC
AGAAGGCGAAGAAGAGCTCGGTGCCCAACGAGAACATCGAGCGGGCGCGCAAGCGCGGCGCCGGCGAGGAGGCCGGCGGC
GCCGACTGGCAGACCATCACCTACGAGGGGTATGCGCCCAACGGCGTGGCGGTGCTGATCGAGTGCCTGACCGACAACCG
CAACCGCGCCGCCAGCGAGGTGCGGGTGGCGATGACTCGCAACGGCGGCACCATGGCCGATCCGGGTTCGGTGTCCTACC
TGTTCTCCCGCAAGAGCGTCGTCACCTGTGAGAAGAACGGCCTGACCGAGGACGACATCCTGGCGGCCGTGCTGGATGCC
GGCGCCGAAGAGGTCGAGGACCTCGGCGACAGCTTCGAAATCATCTGCGAGCCAACCGATCTCGTCGCGGTGCGGACGGC
GCTGCAGGACGCGGGCATCGACTACGACTCCGCCGAGGCGGGATTCCAGCCGTCGGTGACGGTGCCGCTGAACGCCGACG
GCGCGCAGAAGGTGATGCGGCTGGTCGACGCGCTCGAGGACAGCGACGACGTCCAGGACGTGTGGACCAACGCCGACATT
CCCGACGAGATCCTGGCCCAGATCGAGGAGTGA

Upstream 100 bases:

>100_bases
TCGGCGACGACGGTCACGCTGGCGTGACGCTCGGCGCTTTCGGCGCCCACGTAGACTCGTCTGGCGACTTTCGACGAGAT
AGAAGAGGTACGACACACCG

Downstream 100 bases:

>100_bases
CGCAGGCCGATCAGTCGTAGCCGTGCCGCATGTCGCCGACGATGCGCGGATTGTCCAGCGTCGAGGGTTCCAGCGGGCGC
GGCCCGACGTCGCCGGAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MSGHSKWATTKHKKAVIDARRGKMFARLIKNIEVAARVGGGDPAGNPTLYDAIQKAKKSSVPNENIERARKRGAGEEAGG
ADWQTITYEGYAPNGVAVLIECLTDNRNRAASEVRVAMTRNGGTMADPGSVSYLFSRKSVVTCEKNGLTEDDILAAVLDA
GAEEVEDLGDSFEIICEPTDLVAVRTALQDAGIDYDSAEAGFQPSVTVPLNADGAQKVMRLVDALEDSDDVQDVWTNADI
PDEILAQIEE

Sequences:

>Translated_250_residues
MSGHSKWATTKHKKAVIDARRGKMFARLIKNIEVAARVGGGDPAGNPTLYDAIQKAKKSSVPNENIERARKRGAGEEAGG
ADWQTITYEGYAPNGVAVLIECLTDNRNRAASEVRVAMTRNGGTMADPGSVSYLFSRKSVVTCEKNGLTEDDILAAVLDA
GAEEVEDLGDSFEIICEPTDLVAVRTALQDAGIDYDSAEAGFQPSVTVPLNADGAQKVMRLVDALEDSDDVQDVWTNADI
PDEILAQIEE
>Mature_249_residues
SGHSKWATTKHKKAVIDARRGKMFARLIKNIEVAARVGGGDPAGNPTLYDAIQKAKKSSVPNENIERARKRGAGEEAGGA
DWQTITYEGYAPNGVAVLIECLTDNRNRAASEVRVAMTRNGGTMADPGSVSYLFSRKSVVTCEKNGLTEDDILAAVLDAG
AEEVEDLGDSFEIICEPTDLVAVRTALQDAGIDYDSAEAGFQPSVTVPLNADGAQKVMRLVDALEDSDDVQDVWTNADIP
DEILAQIEE

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family

Homologues:

Organism=Homo sapiens, GI27545315, Length=248, Percent_Identity=28.2258064516129, Blast_Score=115, Evalue=3e-26,
Organism=Escherichia coli, GI1788171, Length=249, Percent_Identity=46.1847389558233, Blast_Score=223, Evalue=1e-59,
Organism=Escherichia coli, GI1788294, Length=237, Percent_Identity=34.5991561181435, Blast_Score=119, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI17556100, Length=253, Percent_Identity=25.6916996047431, Blast_Score=67, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6321458, Length=264, Percent_Identity=32.9545454545455, Blast_Score=127, Evalue=1e-30,
Organism=Drosophila melanogaster, GI24583305, Length=248, Percent_Identity=25.8064516129032, Blast_Score=88, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1030_MYCPA (P62039)

Other databases:

- EMBL:   AE016958
- RefSeq:   NP_959964.1
- ProteinModelPortal:   P62039
- SMR:   P62039
- EnsemblBacteria:   EBMYCT00000039826
- GeneID:   2720757
- GenomeReviews:   AE016958_GR
- KEGG:   mpa:MAP1030
- NMPDR:   fig|262316.1.peg.1030
- GeneTree:   EBGT00050000017717
- HOGENOM:   HBG715231
- OMA:   VYANFDI
- ProtClustDB:   PRK00110
- HAMAP:   MF_00693
- InterPro:   IPR002876
- InterPro:   IPR017856
- Gene3D:   G3DSA:1.10.10.200
- PANTHER:   PTHR12532
- TIGRFAMs:   TIGR01033

Pfam domain/function: PF01709 DUF28; SSF75625 DUF28

EC number: NA

Molecular weight: Translated: 26784; Mature: 26653

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGHSKWATTKHKKAVIDARRGKMFARLIKNIEVAARVGGGDPAGNPTLYDAIQKAKKSS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHC
VPNENIERARKRGAGEEAGGADWQTITYEGYAPNGVAVLIECLTDNRNRAASEVRVAMTR
CCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCHHHHHEEEEEEC
NGGTMADPGSVSYLFSRKSVVTCEKNGLTEDDILAAVLDAGAEEVEDLGDSFEIICEPTD
CCCCCCCCCCEEEEECCCEEEEECCCCCCHHHHHHHHHHCCHHHHHHCCCCEEEEECCHH
LVAVRTALQDAGIDYDSAEAGFQPSVTVPLNADGAQKVMRLVDALEDSDDVQDVWTNADI
HHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHCCCCC
PDEILAQIEE
CHHHHHHCCC
>Mature Secondary Structure 
SGHSKWATTKHKKAVIDARRGKMFARLIKNIEVAARVGGGDPAGNPTLYDAIQKAKKSS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHC
VPNENIERARKRGAGEEAGGADWQTITYEGYAPNGVAVLIECLTDNRNRAASEVRVAMTR
CCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCHHHHHEEEEEEC
NGGTMADPGSVSYLFSRKSVVTCEKNGLTEDDILAAVLDAGAEEVEDLGDSFEIICEPTD
CCCCCCCCCCEEEEECCCEEEEECCCCCCHHHHHHHHHHCCHHHHHHCCCCEEEEECCHH
LVAVRTALQDAGIDYDSAEAGFQPSVTVPLNADGAQKVMRLVDALEDSDDVQDVWTNADI
HHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHCCCCC
PDEILAQIEE
CHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA