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The map label for this gene is 41407083

Identifier: 41407083

GI number: 41407083

Start: 1023277

End: 1023891

Strand: Direct

Name: 41407083

Synonym: MAP0985

Alternate gene names: NA

Gene position: 1023277-1023891 (Clockwise)

Preceding gene: 41407075

Following gene: 41407085

Centisome position: 21.19

GC content: 69.43

Gene sequence:

>615_bases
GTGCGGGCGCCGCGCGCGCGGATGACCGGCAGCGAGCGCCGGCAGCAGCTCATCGGCATCGCGCGCTCGCTGTTCGCCGA
ACGCGGCTACGAGGGCACCTCGATCGAGGAGATCGCGCTGCGCGCCAACGTGTCCAAGCCGGTGGTCTACGAGCATTTCG
GCGGCAAGGAGGGCCTGTACGCCGTCGTCGTCGACCGGGAGATGTCGGCGTTGCTGGACGGCATCACCTCGTCGCTTACC
AACAACCGGTCCCGGGTGCGCGTCGAGCGGGTCGCGCTGGCGTTGCTCACCTACGTCGAGGAGCGCACCGACGGCTTCCG
GATCATGATCCGCGACTCGCCGGCCGCGATCAGCTCGGGCACCTACTCCAGCCTGCTCAACGACGCCGTCAGCCAGGTCA
GCTCCATCCTGGCCGGCGACTTCGCCCGGCGCGGCCTGGACCCCGACCTGGCGCCGCTGTACGCCCAGGCGCTGGTGGGT
TCGGTGTCGATGACGGCGCAGTGGTGGCTCGACACCCGCGAGCCCAAGAAGGAAGTGGTGGCCGCCCACCTGGTCAACCT
GATGTGGAACGGGTTGACGCATCTGGAAGCCGACCCCCGGCTGCAAGACGAGTGA

Upstream 100 bases:

>100_bases
GGCGCCGCGGGAAAGACGGGCGGCGCGGCGCGGGCGACGCTATACGCTGATTGACGTGGCCGTGCTGGACTCGCAAACCC
ACAAGGACCCGGACAAGGAG

Downstream 100 bases:

>100_bases
GCGTTCCGCGGGTGTAACGCCACGGCGGTCTCCGGCCGGATTCGGCCGCCGTGGCGTTACGAGCGGCGAGCCGGGGCTAC
CCGCGGTCGCGGGCCAGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; TetR-Family Transcriptional Regulator; Transcriptional Regulator; Regulatory Protein TetR; TetR-Type Transcriptional Regulator; TetR/AcrR Family Transcriptional Regulator; Transcriptional Regulatory Protein; Transcriptional Regulator TetR-Family; Transcriptional Regulator TetR Family Protein; TetR-Family Protein Regulatory Protein; Transcription Regulator; Transcriptional Regulator Tetr Family; TetR-Family Regulatory Protein; TetR-Family Transcriptional Regulator Protein

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MRAPRARMTGSERRQQLIGIARSLFAERGYEGTSIEEIALRANVSKPVVYEHFGGKEGLYAVVVDREMSALLDGITSSLT
NNRSRVRVERVALALLTYVEERTDGFRIMIRDSPAAISSGTYSSLLNDAVSQVSSILAGDFARRGLDPDLAPLYAQALVG
SVSMTAQWWLDTREPKKEVVAAHLVNLMWNGLTHLEADPRLQDE

Sequences:

>Translated_204_residues
MRAPRARMTGSERRQQLIGIARSLFAERGYEGTSIEEIALRANVSKPVVYEHFGGKEGLYAVVVDREMSALLDGITSSLT
NNRSRVRVERVALALLTYVEERTDGFRIMIRDSPAAISSGTYSSLLNDAVSQVSSILAGDFARRGLDPDLAPLYAQALVG
SVSMTAQWWLDTREPKKEVVAAHLVNLMWNGLTHLEADPRLQDE
>Mature_204_residues
MRAPRARMTGSERRQQLIGIARSLFAERGYEGTSIEEIALRANVSKPVVYEHFGGKEGLYAVVVDREMSALLDGITSSLT
NNRSRVRVERVALALLTYVEERTDGFRIMIRDSPAAISSGTYSSLLNDAVSQVSSILAGDFARRGLDPDLAPLYAQALVG
SVSMTAQWWLDTREPKKEVVAAHLVNLMWNGLTHLEADPRLQDE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22563; Mature: 22563

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAPRARMTGSERRQQLIGIARSLFAERGYEGTSIEEIALRANVSKPVVYEHFGGKEGLY
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEEECCCCCCCCEE
AVVVDREMSALLDGITSSLTNNRSRVRVERVALALLTYVEERTDGFRIMIRDSPAAISSG
EEEECHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC
TYSSLLNDAVSQVSSILAGDFARRGLDPDLAPLYAQALVGSVSMTAQWWLDTREPKKEVV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
AAHLVNLMWNGLTHLEADPRLQDE
HHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRAPRARMTGSERRQQLIGIARSLFAERGYEGTSIEEIALRANVSKPVVYEHFGGKEGLY
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEEECCCCCCCCEE
AVVVDREMSALLDGITSSLTNNRSRVRVERVALALLTYVEERTDGFRIMIRDSPAAISSG
EEEECHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC
TYSSLLNDAVSQVSSILAGDFARRGLDPDLAPLYAQALVGSVSMTAQWWLDTREPKKEVV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
AAHLVNLMWNGLTHLEADPRLQDE
HHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA