The gene/protein map for NC_002944 is currently unavailable.
Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41407072

Identifier: 41407072

GI number: 41407072

Start: 1011946

End: 1013064

Strand: Direct

Name: 41407072

Synonym: MAP0974

Alternate gene names: NA

Gene position: 1011946-1013064 (Clockwise)

Preceding gene: 41407071

Following gene: 41407073

Centisome position: 20.95

GC content: 69.71

Gene sequence:

>1119_bases
TTGACAAAACTTCATCAGAACCCTTCGCCGATGTTGCGGCTCGTGGTCGGGGGGCTGCTGGTAGTCCTGGCATTCGCGGG
CGGATACGCGGTTTCGGTGTGCAAGACGGTGACGTTGACCGTCGACGGTGTCGCCATGCGGGTGACCACGATGAAGTCCA
AGGTGATCGACGTCGTCGAGGAGAACGGCTTCGTCGTCGACGACCGTGACGACCTGTACCCCGCCGCCGATGTCGCGGTG
CACGACGCCGGCAAGATCGTGCTGCGGCGCAGCCGCCCGCTGCAGATCTCCCTGGACGGCCACGACAGCAAGCAGGTGTG
GACCACGGCCTCCACGGTCGACGAGGCGCTGGCCCAGCTGGCCATGACAGATACCGCCCCGGCCGCGGCCAACCGCGGCA
GCCGGGTGCCGCTGGCCGGCATGGCCCTGCCCGTCGTCAGCGCCAAGACGGTGCGCATCAACGACGGCGGCGCCGTGCGC
ACCGTGCATCTGGCGGCATCCAACGTCGCGGGCCTGCTCAGCGCCGCCGGCGCGCCGCTGGCCGAAAGCGACCAGGTGGC
GCCCCCGGCGTCGGCGCCGATCGTCGACGGCATGGAGATCCAGGTGACCCGCAACCGGATTCAGCAGGTCACCGAGCGGA
TGCCGTTGCCGCCCAACGCCCGCCGGATCGAAGACCCGGACATGAACATGAGCCGCCAGGTGGTCGAGGATCCCGGCAGC
CCGGGCACGCAGGACGTCACCTTCTCGGTGGCCACCGTCAACGGCGTGGAGACCGGCCGGCTGCCGATCGCCAACACGGT
GATCACCCCGGCCCGCGAATCGGTGGTGAGGGTCGGCACCAAGCCCGGCACCGAGGTCCCGCCGATCAGCGACGGCTCCA
TCTGGGACGCCATCGCGGGCTGCGAAGCCGGCGGAAACTGGGCGATCAACACCGGTAACGGGTATTACGGCGGTGTGCAG
TTCGACCAGGGCACGTGGGAGCGCAACGGCGGGTTGCGGTTCGCCCCGCGCGCCGACCTGGCCACCCGCGAAGAGCAGAT
CACCGTCGCCGAGGTGACCCGAGAGCGCCAGGGTTGGGGTGCGTGGCCAGTGTGCAGCGGAAGAGCTGGTGCGCGCTGA

Upstream 100 bases:

>100_bases
TTACCGTCTTGTGATCGAACGGGTGGGCCTGCGGGCCCTTCATTTGTGAATTGCCGCTGAGTGAGTGGTTGCTGAGGTTG
GGTAGCGCGCGTTGAGTGTA

Downstream 100 bases:

>100_bases
CCATCCGGCTCCTCGGGCGCACCGAGATCAGGCGGCTGGCCAAAGAACTTGAATTTCGGCCACGGAAATCCCTCGGCCAG
AACTTCGTGCACGACGCCAA

Product: hypothetical protein

Products: NA

Alternate protein names: Secreted Protein; Transglycosylase Domain Protein; Resuscitation-Promoting Factor RpfA; Resuscitation-Promoting Factor; Resuscitation-Promoting Factor RpfB; Transglycosylase-Like Protein; Peptidase; G5 Domain-Containing Protein; Transglycosylase Family Protein; M23 Family Secreted Peptidase; M23 Peptidase Domain-Containing Protein; Resuscitation-Promoting Factor RpfC; Resuscitation-Promoting Factor RpfE; Transglycosylase-Like Domain Protein; Resuscitation-Promoting Factor-Like Protein; Transglycosylase; Resuscitation-Promoting Factor Rpfe; Resuscitation-Promoting Factor RpfD; N-Acetylmuramoyl-L-Alanine Amidase; Secreted Esterase; Resuscitation-Promoting Factor Rpfd; LOW QUALITY PROTEIN Lipoprotein; G5 Domain Protein; Secreted Transglycosydase; Resuscitation-Promoting Factor Rpfb; G5 Domain Transglycosylase; 3D Domain Protein; Resuscitation-Promoting Factor Rpfa; Transglycosylase Domain Containing Protein; Vegetative Cell Wall; Cell Wall Catabolism Protein; FHA Domain-Containing Protein; Cell Wall Function Protein; Transglycosylase-Like Domain-Containing Protein; Resuscitation-Promoting Factor Rpfc; Lipoprotein; M24/M37 Family Peptidase

Number of amino acids: Translated: 372; Mature: 371

Protein sequence:

>372_residues
MTKLHQNPSPMLRLVVGGLLVVLAFAGGYAVSVCKTVTLTVDGVAMRVTTMKSKVIDVVEENGFVVDDRDDLYPAADVAV
HDAGKIVLRRSRPLQISLDGHDSKQVWTTASTVDEALAQLAMTDTAPAAANRGSRVPLAGMALPVVSAKTVRINDGGAVR
TVHLAASNVAGLLSAAGAPLAESDQVAPPASAPIVDGMEIQVTRNRIQQVTERMPLPPNARRIEDPDMNMSRQVVEDPGS
PGTQDVTFSVATVNGVETGRLPIANTVITPARESVVRVGTKPGTEVPPISDGSIWDAIAGCEAGGNWAINTGNGYYGGVQ
FDQGTWERNGGLRFAPRADLATREEQITVAEVTRERQGWGAWPVCSGRAGAR

Sequences:

>Translated_372_residues
MTKLHQNPSPMLRLVVGGLLVVLAFAGGYAVSVCKTVTLTVDGVAMRVTTMKSKVIDVVEENGFVVDDRDDLYPAADVAV
HDAGKIVLRRSRPLQISLDGHDSKQVWTTASTVDEALAQLAMTDTAPAAANRGSRVPLAGMALPVVSAKTVRINDGGAVR
TVHLAASNVAGLLSAAGAPLAESDQVAPPASAPIVDGMEIQVTRNRIQQVTERMPLPPNARRIEDPDMNMSRQVVEDPGS
PGTQDVTFSVATVNGVETGRLPIANTVITPARESVVRVGTKPGTEVPPISDGSIWDAIAGCEAGGNWAINTGNGYYGGVQ
FDQGTWERNGGLRFAPRADLATREEQITVAEVTRERQGWGAWPVCSGRAGAR
>Mature_371_residues
TKLHQNPSPMLRLVVGGLLVVLAFAGGYAVSVCKTVTLTVDGVAMRVTTMKSKVIDVVEENGFVVDDRDDLYPAADVAVH
DAGKIVLRRSRPLQISLDGHDSKQVWTTASTVDEALAQLAMTDTAPAAANRGSRVPLAGMALPVVSAKTVRINDGGAVRT
VHLAASNVAGLLSAAGAPLAESDQVAPPASAPIVDGMEIQVTRNRIQQVTERMPLPPNARRIEDPDMNMSRQVVEDPGSP
GTQDVTFSVATVNGVETGRLPIANTVITPARESVVRVGTKPGTEVPPISDGSIWDAIAGCEAGGNWAINTGNGYYGGVQF
DQGTWERNGGLRFAPRADLATREEQITVAEVTRERQGWGAWPVCSGRAGAR

Specific function: Unknown

COG id: COG3583

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39186; Mature: 39055

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: PS51109 G5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKLHQNPSPMLRLVVGGLLVVLAFAGGYAVSVCKTVTLTVDGVAMRVTTMKSKVIDVVE
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCEEEEEEHHHHHHHHHHH
ENGFVVDDRDDLYPAADVAVHDAGKIVLRRSRPLQISLDGHDSKQVWTTASTVDEALAQL
CCCEEEECCCCCCCCHHEEEECCCEEEEECCCCEEEEECCCCCCEEEEEHHHHHHHHHHH
AMTDTAPAAANRGSRVPLAGMALPVVSAKTVRINDGGAVRTVHLAASNVAGLLSAAGAPL
HHCCCCCHHCCCCCCCCCCCEEEEEECEEEEEECCCCCEEEEEEEHHHHHHHHHHCCCCC
AESDQVAPPASAPIVDGMEIQVTRNRIQQVTERMPLPPNARRIEDPDMNMSRQVVEDPGS
CCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCC
PGTQDVTFSVATVNGVETGRLPIANTVITPARESVVRVGTKPGTEVPPISDGSIWDAIAG
CCCCEEEEEEEEECCCCCCCCCCCCEEECCCHHHHEEECCCCCCCCCCCCCCCHHHHHHC
CEAGGNWAINTGNGYYGGVQFDQGTWERNGGLRFAPRADLATREEQITVAEVTRERQGWG
CCCCCCEEEECCCCEECCEEECCCCEECCCCEEECCCCCCCCCCCCEEHHHHHHHHCCCC
AWPVCSGRAGAR
CCCCCCCCCCCC
>Mature Secondary Structure 
TKLHQNPSPMLRLVVGGLLVVLAFAGGYAVSVCKTVTLTVDGVAMRVTTMKSKVIDVVE
CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCEEEEEEHHHHHHHHHHH
ENGFVVDDRDDLYPAADVAVHDAGKIVLRRSRPLQISLDGHDSKQVWTTASTVDEALAQL
CCCEEEECCCCCCCCHHEEEECCCEEEEECCCCEEEEECCCCCCEEEEEHHHHHHHHHHH
AMTDTAPAAANRGSRVPLAGMALPVVSAKTVRINDGGAVRTVHLAASNVAGLLSAAGAPL
HHCCCCCHHCCCCCCCCCCCEEEEEECEEEEEECCCCCEEEEEEEHHHHHHHHHHCCCCC
AESDQVAPPASAPIVDGMEIQVTRNRIQQVTERMPLPPNARRIEDPDMNMSRQVVEDPGS
CCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCC
PGTQDVTFSVATVNGVETGRLPIANTVITPARESVVRVGTKPGTEVPPISDGSIWDAIAG
CCCCEEEEEEEEECCCCCCCCCCCCEEECCCHHHHEEECCCCCCCCCCCCCCCHHHHHHC
CEAGGNWAINTGNGYYGGVQFDQGTWERNGGLRFAPRADLATREEQITVAEVTRERQGWG
CCCCCCEEEECCCCEECCEEECCCCEECCCCEEECCCCCCCCCCCCEEHHHHHHHHCCCC
AWPVCSGRAGAR
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA