| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41407049
Identifier: 41407049
GI number: 41407049
Start: 983019
End: 984644
Strand: Direct
Name: 41407049
Synonym: MAP0951
Alternate gene names: NA
Gene position: 983019-984644 (Clockwise)
Preceding gene: 41407047
Following gene: 41407050
Centisome position: 20.35
GC content: 67.47
Gene sequence:
>1626_bases GTGTGCTTGGCGCTGCTGCTCGACGGGTGCGGTCAGCGCGGCGATCTCGGTCCGCTTTCGCTGATCGCCAGCCCGGCCAT CCCGTTGTCGGTGCAGGACGTTCCGAATCCGCTGCGCGGCCAGTACGAAGATCTGTTGCAACCGCTTTTCCCGCAAGGCA ATCCGGCGCAGCGTCGCTACCCGGCCTGGCCGGCGTCGCAGGACGCCAGTTTGCGTGTTCCGTGGCGGCAGCTGCAGCCC ACCGATCCGAGCAGCCTGCCGCCCGACGCTCCCGACGACCGCAAATTCGATTTCAGCGTGATCGACGACGCGCTGGCGAA GCTGGCCAGCCGCAACATGCGGTTGACCCTGCGGGTGGTCGCCTACAACTCCTGTTGCGACACCGTCTATCCGAACAACA CCAACATCGCGATGCCCGACTGGATGCGCCCGGCGGCCACCAATTACACCGGTCCGCAACGGTATTGGTGGTCACCCGGG GTGACGCAGGTCGTGCCGAACTGGAACGACCAGAACTACCTCAACGCCTTCGGGCAGCTGTTGGCCGCGTTGGGGCGCCG GTACGACGGCGACGAGCGGCTCAGCGTGTTCGAGTTCTCCGGCTACGGCGATTTCAGCGAGAACCACATCTCGTATCTGC GTGACTCGTTGGGCGCGCCGGGTCCGGCGCCCGACGAAAGTGTGGCGAAACTGGGGTATTTCAGCCAGTTCCGGGACCAG AACATCACCGCCGGTTCCATTCGCCAGCTGGTCGAGGCGACCGTAAAGGCTTTTCCCCACACGCAATTGGTGACGACGGC GCTCAACCCGGAGATCGTGCGCCAGTTGATCGCCGACGACGTCACCAAGCGGCTGTCCGCCCCGGTCGGCATCCGCGCCG ACTGCCTGGGCGTGCAGGACCCGCTGCCGGCCTGGGCGGAAAGGGACGGCTCGCACTACGTGCAGACCAAAGACCCGCTG GTCGGCGCGCTGCGCGACCGGATGGCCGCGGCACCGGTGATCACCGAATGGTGCCAGCTGCCGGCCGGGACCGATCCGCG GTCCTACTACGAAAAGGGCCTGCGCGACGTCATGAAGTACCACGTGTCGATGACGTCGAGCTTCAACTTCCCGGCGGTGG ATGCGAGCACCCCGATGGACCCGGCGCTGTACCTGCTGTGGGCGCAGGCCAACGTCGTGGCCGGCTACCGGTATTCGGCC GAGGCGCGGCAGGGATCGCAATCGTTGGCCGACGGCAAGGCGACATTGGACGTCACGTGGACCAATTACGGTTCCGCGGC CGCCACCGAGAACTGGGTCCCCGGCTACCGGCTGGTCGACTTCTCGGGGGCGGTGGTGCGCACGCTGCCCGCGCGGGTGA CGCTGAAAACGCTGGTGCCGGGACCGGACGGCGCGGGCAAGGAACCCGCCCCGGTGTCGTCTGTCGAGACCGTTCACATC GACCTGGCGGGCGTGTCGCCGGGGCACTACACGTTGTGCGCGGCGGTCGGTTGGCAACAGCACAAGCCGGGCGCCGAGCA CGTGGTGAACTACCCGCCCATGCGGCTGGCGCGCGACGGACGCGACGGCAACGGATGCTATCCGCTCGCCACGCTGAACC TGGCGCGCGAAGCCTCGACCGCCTGA
Upstream 100 bases:
>100_bases CGATGCCGTTCCGCAACCACGGCGAGCCGTCGCCGCCGGGCGCGGATCAGCCCGCGCCACGGCGGCGGCGAGAACGAGGA AGTTCGTTCTGGTCGTCGGG
Downstream 100 bases:
>100_bases TCCCGGCGGCGCACCACCTGGCCGAACAAGCCGCCGGAGCCGTGGTGAACCCGCGCAGCGGGACTTCCGATTCCGCCAAA CCCCGCCTGACGATGCTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 541; Mature: 541
Protein sequence:
>541_residues MCLALLLDGCGQRGDLGPLSLIASPAIPLSVQDVPNPLRGQYEDLLQPLFPQGNPAQRRYPAWPASQDASLRVPWRQLQP TDPSSLPPDAPDDRKFDFSVIDDALAKLASRNMRLTLRVVAYNSCCDTVYPNNTNIAMPDWMRPAATNYTGPQRYWWSPG VTQVVPNWNDQNYLNAFGQLLAALGRRYDGDERLSVFEFSGYGDFSENHISYLRDSLGAPGPAPDESVAKLGYFSQFRDQ NITAGSIRQLVEATVKAFPHTQLVTTALNPEIVRQLIADDVTKRLSAPVGIRADCLGVQDPLPAWAERDGSHYVQTKDPL VGALRDRMAAAPVITEWCQLPAGTDPRSYYEKGLRDVMKYHVSMTSSFNFPAVDASTPMDPALYLLWAQANVVAGYRYSA EARQGSQSLADGKATLDVTWTNYGSAAATENWVPGYRLVDFSGAVVRTLPARVTLKTLVPGPDGAGKEPAPVSSVETVHI DLAGVSPGHYTLCAAVGWQQHKPGAEHVVNYPPMRLARDGRDGNGCYPLATLNLAREASTA
Sequences:
>Translated_541_residues MCLALLLDGCGQRGDLGPLSLIASPAIPLSVQDVPNPLRGQYEDLLQPLFPQGNPAQRRYPAWPASQDASLRVPWRQLQP TDPSSLPPDAPDDRKFDFSVIDDALAKLASRNMRLTLRVVAYNSCCDTVYPNNTNIAMPDWMRPAATNYTGPQRYWWSPG VTQVVPNWNDQNYLNAFGQLLAALGRRYDGDERLSVFEFSGYGDFSENHISYLRDSLGAPGPAPDESVAKLGYFSQFRDQ NITAGSIRQLVEATVKAFPHTQLVTTALNPEIVRQLIADDVTKRLSAPVGIRADCLGVQDPLPAWAERDGSHYVQTKDPL VGALRDRMAAAPVITEWCQLPAGTDPRSYYEKGLRDVMKYHVSMTSSFNFPAVDASTPMDPALYLLWAQANVVAGYRYSA EARQGSQSLADGKATLDVTWTNYGSAAATENWVPGYRLVDFSGAVVRTLPARVTLKTLVPGPDGAGKEPAPVSSVETVHI DLAGVSPGHYTLCAAVGWQQHKPGAEHVVNYPPMRLARDGRDGNGCYPLATLNLAREASTA >Mature_541_residues MCLALLLDGCGQRGDLGPLSLIASPAIPLSVQDVPNPLRGQYEDLLQPLFPQGNPAQRRYPAWPASQDASLRVPWRQLQP TDPSSLPPDAPDDRKFDFSVIDDALAKLASRNMRLTLRVVAYNSCCDTVYPNNTNIAMPDWMRPAATNYTGPQRYWWSPG VTQVVPNWNDQNYLNAFGQLLAALGRRYDGDERLSVFEFSGYGDFSENHISYLRDSLGAPGPAPDESVAKLGYFSQFRDQ NITAGSIRQLVEATVKAFPHTQLVTTALNPEIVRQLIADDVTKRLSAPVGIRADCLGVQDPLPAWAERDGSHYVQTKDPL VGALRDRMAAAPVITEWCQLPAGTDPRSYYEKGLRDVMKYHVSMTSSFNFPAVDASTPMDPALYLLWAQANVVAGYRYSA EARQGSQSLADGKATLDVTWTNYGSAAATENWVPGYRLVDFSGAVVRTLPARVTLKTLVPGPDGAGKEPAPVSSVETVHI DLAGVSPGHYTLCAAVGWQQHKPGAEHVVNYPPMRLARDGRDGNGCYPLATLNLAREASTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59045; Mature: 59045
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCLALLLDGCGQRGDLGPLSLIASPAIPLSVQDVPNPLRGQYEDLLQPLFPQGNPAQRRY CCCEEEECCCCCCCCCCHHHHHHCCCCCEEHHCCCCCCCCHHHHHHHHHCCCCCCCCCCC PAWPASQDASLRVPWRQLQPTDPSSLPPDAPDDRKFDFSVIDDALAKLASRNMRLTLRVV CCCCCCCCCEEECCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEE AYNSCCDTVYPNNTNIAMPDWMRPAATNYTGPQRYWWSPGVTQVVPNWNDQNYLNAFGQL EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEECCCCCCCHHHHHHHHH LAALGRRYDGDERLSVFEFSGYGDFSENHISYLRDSLGAPGPAPDESVAKLGYFSQFRDQ HHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCC NITAGSIRQLVEATVKAFPHTQLVTTALNPEIVRQLIADDVTKRLSAPVGIRADCLGVQD CCCHHHHHHHHHHHHHHCCCHHEEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCC PLPAWAERDGSHYVQTKDPLVGALRDRMAAAPVITEWCQLPAGTDPRSYYEKGLRDVMKY CCCHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH HVSMTSSFNFPAVDASTPMDPALYLLWAQANVVAGYRYSAEARQGSQSLADGKATLDVTW HHHHCCCCCCCCCCCCCCCCCEEEEEEECCCEEECEEECCHHHCCCHHHCCCCEEEEEEE TNYGSAAATENWVPGYRLVDFSGAVVRTLPARVTLKTLVPGPDGAGKEPAPVSSVETVHI CCCCCCCCCCCCCCCEEEEECCCHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEE DLAGVSPGHYTLCAAVGWQQHKPGAEHVVNYPPMRLARDGRDGNGCYPLATLNLAREAST EEEECCCCCEEEEEECCCCCCCCCHHHCCCCCCHHHHCCCCCCCCCEEEHHHHHHHHCCC A C >Mature Secondary Structure MCLALLLDGCGQRGDLGPLSLIASPAIPLSVQDVPNPLRGQYEDLLQPLFPQGNPAQRRY CCCEEEECCCCCCCCCCHHHHHHCCCCCEEHHCCCCCCCCHHHHHHHHHCCCCCCCCCCC PAWPASQDASLRVPWRQLQPTDPSSLPPDAPDDRKFDFSVIDDALAKLASRNMRLTLRVV CCCCCCCCCEEECCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEE AYNSCCDTVYPNNTNIAMPDWMRPAATNYTGPQRYWWSPGVTQVVPNWNDQNYLNAFGQL EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEECCCCCCCHHHHHHHHH LAALGRRYDGDERLSVFEFSGYGDFSENHISYLRDSLGAPGPAPDESVAKLGYFSQFRDQ HHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCC NITAGSIRQLVEATVKAFPHTQLVTTALNPEIVRQLIADDVTKRLSAPVGIRADCLGVQD CCCHHHHHHHHHHHHHHCCCHHEEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCC PLPAWAERDGSHYVQTKDPLVGALRDRMAAAPVITEWCQLPAGTDPRSYYEKGLRDVMKY CCCHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH HVSMTSSFNFPAVDASTPMDPALYLLWAQANVVAGYRYSAEARQGSQSLADGKATLDVTW HHHHCCCCCCCCCCCCCCCCCEEEEEEECCCEEECEEECCHHHCCCHHHCCCCEEEEEEE TNYGSAAATENWVPGYRLVDFSGAVVRTLPARVTLKTLVPGPDGAGKEPAPVSSVETVHI CCCCCCCCCCCCCCCEEEEECCCHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEE DLAGVSPGHYTLCAAVGWQQHKPGAEHVVNYPPMRLARDGRDGNGCYPLATLNLAREAST EEEECCCCCEEEEEECCCCCCCCCHHHCCCCCCHHHHCCCCCCCCCEEEHHHHHHHHCCC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA