| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41407046
Identifier: 41407046
GI number: 41407046
Start: 978179
End: 979888
Strand: Direct
Name: 41407046
Synonym: MAP0948
Alternate gene names: NA
Gene position: 978179-979888 (Clockwise)
Preceding gene: 41407042
Following gene: 41407047
Centisome position: 20.25
GC content: 68.36
Gene sequence:
>1710_bases GTGGTCGGCGGTTGTCCCCGGGTGCGATCTGACGCGCTGACGATGGTGTGCTCATCGGGGAAACGAGCGCTGGCCGCTGT CATCTGCATCGCGGCGGTGCTGAGCGGATGCGGCGGCAAGCCCGATCCGGGGCCGCTGTCGGCCATGGTCAGCCCGGCCA TCCCGCCCACCGCGCAGGAGATCCCCAACCCGCTGCGCGGCCAGTACGAGCAGATGCTGAATCCGCTTTTCCCGCAAGGT AATTCGGCGCAGCAACGGTACTCTCCGTGGCCCGCCTCCTACGACGCCAGCCTGCGGGTCTCCTGGCGGCAGCTGCAGCC CGTCGACCCGCGCACGCTGCCCCCCGACGCGCCCGACGACCGCAAGTTCGACTTCTCCGCGATCGACGACGCGCTGGCCA AGCTGGGCGCCCGCAACATGCGCCTGACCCTGGGCGTGTACACCTACCGGTCCTGTTGCAACGACACCTATCCGGACAAC ACCGCCATCGCGATTCCGGACTGGCTGCGCCCGTCGTCGACGAGTTATCCGCCGCCGAACCAGGCCCCCGGCGTCACCCA GGTGGTGCCGAACTTCAACGACCCCGACTACCTCAACGGCGTCACCGCGCTGCTGGCCGCGCTGGGCCGCCGGTACGACG GCGACGAGCGGGTGAGCGTGTTCGAGTTCTCCGGCTACGGCGACTTCGGTGAGAACCAGCTCGGCTATCCGCGCGATTCG CTGGGCGCGCCGGGCCCCGCTCCGGACGACAGCGTGGCAAAGCTGGGTTATTACAGCCAATTCCGCGACCAGAGCATCAC CAAGGCCTCCATCGCGCAGCTGGTCGCGGCCAACACCAACGCCTTCCCGCACACCCAGTTGGTGGTGGCGCCGCAGAATC CGGAGATCGTGCGCCAACTGCTCGCCGACGACGTCACCAAGAAACTGTCCGCGCCGGTCGGGATCCGCGCGGATTGCCTC GGGGTGCAGTCGCCGTTGCCGGAATGGGCCGAGGCCAACGACTCTCACTACGTCCGGTCCAACGACGCCGTCGTCGCGGC CATCAAGCAGCGGCTCGGTTCGGGACTGGTGATCAGTCAGTGGTGCCGGCCGCCCAAGGGCGCCGACTCCCGGTCGTACT ACGAGAAGGGGCTGCACGACGTCATCCGCTACCACGTCTCGATGACGTCGAGCGCCGACTTCCCGGACCGGGATGCGACG TCGGCGATGGACCCCGAGCTGTATCTGCTGTGGGGGCAGGCCAATACGTCGGCTGGTTACCGGTACTCGGTGGAGGCCAA GCCCGGATCGCAGTCGATCCAGGGCAAGGTGGCCAGCATCTCGGTGGTGTGGACCAACTACGGCGCGGCGGCCGCCACCG AGCACTGGGTGCCCGGCTACAAGCTGGTGGACTTCTCCGGGGCGATCGTTCGCAGCCTGCCCGCGACGGTCAACCTCAAG ACGCTGGTGCACGACGAATCCAGCACGTCACGCGAGGAACCGGTCCCGGAATCGGCCACCGAATCGGTGCACGTCGACGT GACCGGCCTGGCGCCCGGCCACTACACGCTGCGCGCCACGGTGGACTGGCAGCAACACAAGCCGGACGCCTCGCACGTCG TCAACTACGCGCCCATGGCACTGGCCCGCGACGGCCGCGACGGTGCCGGCCTGTATCCGATTGCCACACTTGACATCCCG AGCGACGCGGGCTCGGCAAGCGGTCACTGA
Upstream 100 bases:
>100_bases CCGGGGCCACTTGCCCGCGCATCGGTGTGTATTGGGAGAAGCAAACCGTGACGACGACCATCTCTTCGAGTGGACCCGGC GCGCCGACCGGTCGCGGCGG
Downstream 100 bases:
>100_bases CCGTCGCGGCTTTTTCCGCAGAATCCCGATCGCCGGGCCGGTGCGTGATACCGTTTCCGCACGTATTTCGGCCCCGTGAC GTGGGGTCGGCACCCAGACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 569; Mature: 569
Protein sequence:
>569_residues MVGGCPRVRSDALTMVCSSGKRALAAVICIAAVLSGCGGKPDPGPLSAMVSPAIPPTAQEIPNPLRGQYEQMLNPLFPQG NSAQQRYSPWPASYDASLRVSWRQLQPVDPRTLPPDAPDDRKFDFSAIDDALAKLGARNMRLTLGVYTYRSCCNDTYPDN TAIAIPDWLRPSSTSYPPPNQAPGVTQVVPNFNDPDYLNGVTALLAALGRRYDGDERVSVFEFSGYGDFGENQLGYPRDS LGAPGPAPDDSVAKLGYYSQFRDQSITKASIAQLVAANTNAFPHTQLVVAPQNPEIVRQLLADDVTKKLSAPVGIRADCL GVQSPLPEWAEANDSHYVRSNDAVVAAIKQRLGSGLVISQWCRPPKGADSRSYYEKGLHDVIRYHVSMTSSADFPDRDAT SAMDPELYLLWGQANTSAGYRYSVEAKPGSQSIQGKVASISVVWTNYGAAAATEHWVPGYKLVDFSGAIVRSLPATVNLK TLVHDESSTSREEPVPESATESVHVDVTGLAPGHYTLRATVDWQQHKPDASHVVNYAPMALARDGRDGAGLYPIATLDIP SDAGSASGH
Sequences:
>Translated_569_residues MVGGCPRVRSDALTMVCSSGKRALAAVICIAAVLSGCGGKPDPGPLSAMVSPAIPPTAQEIPNPLRGQYEQMLNPLFPQG NSAQQRYSPWPASYDASLRVSWRQLQPVDPRTLPPDAPDDRKFDFSAIDDALAKLGARNMRLTLGVYTYRSCCNDTYPDN TAIAIPDWLRPSSTSYPPPNQAPGVTQVVPNFNDPDYLNGVTALLAALGRRYDGDERVSVFEFSGYGDFGENQLGYPRDS LGAPGPAPDDSVAKLGYYSQFRDQSITKASIAQLVAANTNAFPHTQLVVAPQNPEIVRQLLADDVTKKLSAPVGIRADCL GVQSPLPEWAEANDSHYVRSNDAVVAAIKQRLGSGLVISQWCRPPKGADSRSYYEKGLHDVIRYHVSMTSSADFPDRDAT SAMDPELYLLWGQANTSAGYRYSVEAKPGSQSIQGKVASISVVWTNYGAAAATEHWVPGYKLVDFSGAIVRSLPATVNLK TLVHDESSTSREEPVPESATESVHVDVTGLAPGHYTLRATVDWQQHKPDASHVVNYAPMALARDGRDGAGLYPIATLDIP SDAGSASGH >Mature_569_residues MVGGCPRVRSDALTMVCSSGKRALAAVICIAAVLSGCGGKPDPGPLSAMVSPAIPPTAQEIPNPLRGQYEQMLNPLFPQG NSAQQRYSPWPASYDASLRVSWRQLQPVDPRTLPPDAPDDRKFDFSAIDDALAKLGARNMRLTLGVYTYRSCCNDTYPDN TAIAIPDWLRPSSTSYPPPNQAPGVTQVVPNFNDPDYLNGVTALLAALGRRYDGDERVSVFEFSGYGDFGENQLGYPRDS LGAPGPAPDDSVAKLGYYSQFRDQSITKASIAQLVAANTNAFPHTQLVVAPQNPEIVRQLLADDVTKKLSAPVGIRADCL GVQSPLPEWAEANDSHYVRSNDAVVAAIKQRLGSGLVISQWCRPPKGADSRSYYEKGLHDVIRYHVSMTSSADFPDRDAT SAMDPELYLLWGQANTSAGYRYSVEAKPGSQSIQGKVASISVVWTNYGAAAATEHWVPGYKLVDFSGAIVRSLPATVNLK TLVHDESSTSREEPVPESATESVHVDVTGLAPGHYTLRATVDWQQHKPDASHVVNYAPMALARDGRDGAGLYPIATLDIP SDAGSASGH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61156; Mature: 61156
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGGCPRVRSDALTMVCSSGKRALAAVICIAAVLSGCGGKPDPGPLSAMVSPAIPPTAQE CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCHHH IPNPLRGQYEQMLNPLFPQGNSAQQRYSPWPASYDASLRVSWRQLQPVDPRTLPPDAPDD CCCHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCEEEEEHHHCCCCCCCCCCCCCCCC RKFDFSAIDDALAKLGARNMRLTLGVYTYRSCCNDTYPDNTAIAIPDWLRPSSTSYPPPN CCCCHHHHHHHHHHHCCCCEEEEEEHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCC QAPGVTQVVPNFNDPDYLNGVTALLAALGRRYDGDERVSVFEFSGYGDFGENQLGYPRDS CCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCHH LGAPGPAPDDSVAKLGYYSQFRDQSITKASIAQLVAANTNAFPHTQLVVAPQNPEIVRQL CCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHH LADDVTKKLSAPVGIRADCLGVQSPLPEWAEANDSHYVRSNDAVVAAIKQRLGSGLVISQ HHHHHHHHHCCCCCCCHHHCCCCCCCCHHHCCCCCCEEECCCHHHHHHHHHHCCCCEEHH WCRPPKGADSRSYYEKGLHDVIRYHVSMTSSADFPDRDATSAMDPELYLLWGQANTSAGY HCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCE RYSVEAKPGSQSIQGKVASISVVWTNYGAAAATEHWVPGYKLVDFSGAIVRSLPATVNLK EEEEECCCCCCCCCCEEEEEEEEEECCCCHHHHHCCCCCEEEEECCCHHHHHCCCCEEEE TLVHDESSTSREEPVPESATESVHVDVTGLAPGHYTLRATVDWQQHKPDASHVVNYAPMA EEEECCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEEECHHHCCCCHHHHHHHCCHH LARDGRDGAGLYPIATLDIPSDAGSASGH HCCCCCCCCCEEEEEEEECCCCCCCCCCC >Mature Secondary Structure MVGGCPRVRSDALTMVCSSGKRALAAVICIAAVLSGCGGKPDPGPLSAMVSPAIPPTAQE CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCHHH IPNPLRGQYEQMLNPLFPQGNSAQQRYSPWPASYDASLRVSWRQLQPVDPRTLPPDAPDD CCCHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCEEEEEHHHCCCCCCCCCCCCCCCC RKFDFSAIDDALAKLGARNMRLTLGVYTYRSCCNDTYPDNTAIAIPDWLRPSSTSYPPPN CCCCHHHHHHHHHHHCCCCEEEEEEHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCC QAPGVTQVVPNFNDPDYLNGVTALLAALGRRYDGDERVSVFEFSGYGDFGENQLGYPRDS CCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCHH LGAPGPAPDDSVAKLGYYSQFRDQSITKASIAQLVAANTNAFPHTQLVVAPQNPEIVRQL CCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHH LADDVTKKLSAPVGIRADCLGVQSPLPEWAEANDSHYVRSNDAVVAAIKQRLGSGLVISQ HHHHHHHHHCCCCCCCHHHCCCCCCCCHHHCCCCCCEEECCCHHHHHHHHHHCCCCEEHH WCRPPKGADSRSYYEKGLHDVIRYHVSMTSSADFPDRDATSAMDPELYLLWGQANTSAGY HCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCE RYSVEAKPGSQSIQGKVASISVVWTNYGAAAATEHWVPGYKLVDFSGAIVRSLPATVNLK EEEEECCCCCCCCCCEEEEEEEEEECCCCHHHHHCCCCCEEEEECCCHHHHHCCCCEEEE TLVHDESSTSREEPVPESATESVHVDVTGLAPGHYTLRATVDWQQHKPDASHVVNYAPMA EEEECCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEEECHHHCCCCHHHHHHHCCHH LARDGRDGAGLYPIATLDIPSDAGSASGH HCCCCCCCCCEEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA