Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
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Accession | NC_002944 |
Length | 4,829,781 |
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The map label for this gene is rpmF
Identifier: 41407013
GI number: 41407013
Start: 948112
End: 948285
Strand: Direct
Name: rpmF
Synonym: MAP0915
Alternate gene names: 41407013
Gene position: 948112-948285 (Clockwise)
Preceding gene: 41407005
Following gene: 41407014
Centisome position: 19.63
GC content: 68.97
Gene sequence:
>174_bases ATGGCCGTACCCAAGCGCAGAATGTCGCGCGCGAACACCCGTAGCCGGCGCGCGCAGTGGAAGGCGGAGAAGACCGAGCT CGTCGGTGTGACGGTGGCAGGTCAGCGGCACAAGGTGCCGCGCAGGCTGCTCAAGGCGGCCCGTCTCGGCCTGATCGATC TCGACCGCCGCTGA
Upstream 100 bases:
>100_bases CAACGACTATCCTGATGTCCAATCGTCGCACGTTCGGCCCGACCGGCCACGCCGCGCGACATGCCCGTTCAAGCCCCCGA CCGAGGAGTTAGGCCCGACC
Downstream 100 bases:
>100_bases CCTTGATGGCGGCGGCCCGCTGCGCCCGGCTTTCGCCGCGCTGGCGACCGCCGCTGACCTTGATGGCGGCGCGCCTCTCA GGTCAGTCTCAGGCGGTGGG
Product: 50S ribosomal protein L32
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 57; Mature: 56
Protein sequence:
>57_residues MAVPKRRMSRANTRSRRAQWKAEKTELVGVTVAGQRHKVPRRLLKAARLGLIDLDRR
Sequences:
>Translated_57_residues MAVPKRRMSRANTRSRRAQWKAEKTELVGVTVAGQRHKVPRRLLKAARLGLIDLDRR >Mature_56_residues AVPKRRMSRANTRSRRAQWKAEKTELVGVTVAGQRHKVPRRLLKAARLGLIDLDRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribosomal protein L32P family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002677 [H]
Pfam domain/function: PF01783 Ribosomal_L32p [H]
EC number: NA
Molecular weight: Translated: 6606; Mature: 6475
Theoretical pI: Translated: 12.66; Mature: 12.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVPKRRMSRANTRSRRAQWKAEKTELVGVTVAGQRHKVPRRLLKAARLGLIDLDRR CCCCHHHHHHCCHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCEECCCC >Mature Secondary Structure AVPKRRMSRANTRSRRAQWKAEKTELVGVTVAGQRHKVPRRLLKAARLGLIDLDRR CCCHHHHHHCCHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA