| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406963
Identifier: 41406963
GI number: 41406963
Start: 886451
End: 887722
Strand: Direct
Name: 41406963
Synonym: MAP0865
Alternate gene names: NA
Gene position: 886451-887722 (Clockwise)
Preceding gene: 41406962
Following gene: 41406964
Centisome position: 18.35
GC content: 58.96
Gene sequence:
>1272_bases GTGCGCGGCCAGTATGGATATACATCGCCGGCGTTGACCGCGGTGAGATGCCTCTCCGATGCTCGATGGACAAGAAGCAT GTTGGAGCTCGTTGGGTTGAGTCGAGCGCTTCCGACGAAGCGTTCAGCTTGGTCGTTGCTGGCTGAGGGCGCCGTGAGGA ATCGTGTGCCGACGCGGATGACATACCTAAAGTCGTATGTGCCGACGTTGATCTCGGTGGCTCCGGCACCGTACGGAGCG AATGCGCGATTTGCTGGGCTGCTCGGGCAAGATCTCAGACAGTGGCAGGTGGCGGCTCCGAAGCTGGCGTCAGCTATTGG TGTACCGAATGTTGTTGTCACCGAGCCGGTCCCAGGTGTGTTCGAGTTGCAGCTGAGAATTGTCGATCCGCTTAGTTCGC CGCTTGAATGGTCGTCTGTGCCAGCCGCCCACTCGTGGTCTCTGAGTTTGGGTATCGATGAAATGGGCGTCTACCAGTCG CTCCCGTTGGCGAACGTATCGGGCGTTGTAGTGGGAGGCGTACCAGGGTCGGGGAAAACCGCGTGGCTGACGAGTGCTCT GGGGTCGTTCGGTGCGTCAGCGGCGGTCCAGTTCGCTGTCATCGACGGGAAGGGTGGTCAGGACTTGGAATGCCTGCGTG CTCGTAGCTGCCGATTCATGAATGACGATCTGGAGCTGCCTGAGATTGCAGCGATTCTGAATGACGCGACCGGTCTAGTC CGTGATCGAATTAGACAGGGCAACAACATATTCGGATCGTCCAACTTTTGGGATCGCGGCCCGACGCCGCAGGTTCCGCT GGTGTTCGTGGTGATTGACGAGTGCCAAGCGTTCCTGGACCCGCGCCAGTTGGTGACGAAGGAGAGGAAAGCTATCGGGG CCGAGATCCATGCCTCGGTTAACTACTTGGTGAGGAAAGGGCGATCGGCGGGAGTCGTATCGATCTTGTCGACGCAAAAG CCGACGGCCGATTCGTTGCCCACGGACATCAGAGATAACGCGTCGTTGAGAGTGTGCTTCGGTGTCCAATCTACATATGC GGCAACGGCAGTCCTTGGAGACGGGTGGCGAAGTGACACGGATGTGTCGCCGCTCGGGATGTCGTCGGGCGTCGGAGTCT CATTTATCGGCGGCCACTTTCGGCGGTTCCGGGCTCCCTTCGTTCGAGAGCGCGTAATTGCGACCCATTCGTGGCGTTGG TCATCCCTGAATCGTGACCCATGGGAACTCCTTCGACCGGAATTGGCAGATGGTCATGTTCGCGATTCCTAG
Upstream 100 bases:
>100_bases TTGCCGTGACGGTATTCGTCGAGCGGCTGGTTCCAATCGGAAACGCGAATGATGTAGTGCGCTCATCGCCTCAGAGGCGC CCGGCGGCGGGTGAGTAACC
Downstream 100 bases:
>100_bases GGAAAGCGGTCTATTCCGCCGTATATCTGTCGGTCCGACATCCTCAGCGGCGCGCTTGCGGATTGGCGGTCATAACTGTT GCAACGGCACTCGGGCACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 423; Mature: 423
Protein sequence:
>423_residues MRGQYGYTSPALTAVRCLSDARWTRSMLELVGLSRALPTKRSAWSLLAEGAVRNRVPTRMTYLKSYVPTLISVAPAPYGA NARFAGLLGQDLRQWQVAAPKLASAIGVPNVVVTEPVPGVFELQLRIVDPLSSPLEWSSVPAAHSWSLSLGIDEMGVYQS LPLANVSGVVVGGVPGSGKTAWLTSALGSFGASAAVQFAVIDGKGGQDLECLRARSCRFMNDDLELPEIAAILNDATGLV RDRIRQGNNIFGSSNFWDRGPTPQVPLVFVVIDECQAFLDPRQLVTKERKAIGAEIHASVNYLVRKGRSAGVVSILSTQK PTADSLPTDIRDNASLRVCFGVQSTYAATAVLGDGWRSDTDVSPLGMSSGVGVSFIGGHFRRFRAPFVRERVIATHSWRW SSLNRDPWELLRPELADGHVRDS
Sequences:
>Translated_423_residues MRGQYGYTSPALTAVRCLSDARWTRSMLELVGLSRALPTKRSAWSLLAEGAVRNRVPTRMTYLKSYVPTLISVAPAPYGA NARFAGLLGQDLRQWQVAAPKLASAIGVPNVVVTEPVPGVFELQLRIVDPLSSPLEWSSVPAAHSWSLSLGIDEMGVYQS LPLANVSGVVVGGVPGSGKTAWLTSALGSFGASAAVQFAVIDGKGGQDLECLRARSCRFMNDDLELPEIAAILNDATGLV RDRIRQGNNIFGSSNFWDRGPTPQVPLVFVVIDECQAFLDPRQLVTKERKAIGAEIHASVNYLVRKGRSAGVVSILSTQK PTADSLPTDIRDNASLRVCFGVQSTYAATAVLGDGWRSDTDVSPLGMSSGVGVSFIGGHFRRFRAPFVRERVIATHSWRW SSLNRDPWELLRPELADGHVRDS >Mature_423_residues MRGQYGYTSPALTAVRCLSDARWTRSMLELVGLSRALPTKRSAWSLLAEGAVRNRVPTRMTYLKSYVPTLISVAPAPYGA NARFAGLLGQDLRQWQVAAPKLASAIGVPNVVVTEPVPGVFELQLRIVDPLSSPLEWSSVPAAHSWSLSLGIDEMGVYQS LPLANVSGVVVGGVPGSGKTAWLTSALGSFGASAAVQFAVIDGKGGQDLECLRARSCRFMNDDLELPEIAAILNDATGLV RDRIRQGNNIFGSSNFWDRGPTPQVPLVFVVIDECQAFLDPRQLVTKERKAIGAEIHASVNYLVRKGRSAGVVSILSTQK PTADSLPTDIRDNASLRVCFGVQSTYAATAVLGDGWRSDTDVSPLGMSSGVGVSFIGGHFRRFRAPFVRERVIATHSWRW SSLNRDPWELLRPELADGHVRDS
Specific function: Unknown
COG id: COG1674
COG function: function code D; DNA segregation ATPase FtsK/SpoIIIE and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45727; Mature: 45727
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: PS50901 FTSK
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGQYGYTSPALTAVRCLSDARWTRSMLELVGLSRALPTKRSAWSLLAEGAVRNRVPTRM CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHH TYLKSYVPTLISVAPAPYGANARFAGLLGQDLRQWQVAAPKLASAIGVPNVVVTEPVPGV HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCE FELQLRIVDPLSSPLEWSSVPAAHSWSLSLGIDEMGVYQSLPLANVSGVVVGGVPGSGKT EEEEEEEECCCCCCCCCCCCCCCCCEEEEECCHHHHHHHCCCCCCCCEEEEECCCCCCCH AWLTSALGSFGASAAVQFAVIDGKGGQDLECLRARSCRFMNDDLELPEIAAILNDATGLV HHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH RDRIRQGNNIFGSSNFWDRGPTPQVPLVFVVIDECQAFLDPRQLVTKERKAIGAEIHASV HHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHCCHHHHHHHHHHHHCHHHHHHH NYLVRKGRSAGVVSILSTQKPTADSLPTDIRDNASLRVCFGVQSTYAATAVLGDGWRSDT HHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHEECCCCCCCC DVSPLGMSSGVGVSFIGGHFRRFRAPFVRERVIATHSWRWSSLNRDPWELLRPELADGHV CCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHCCHHCCCCC RDS CCC >Mature Secondary Structure MRGQYGYTSPALTAVRCLSDARWTRSMLELVGLSRALPTKRSAWSLLAEGAVRNRVPTRM CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHH TYLKSYVPTLISVAPAPYGANARFAGLLGQDLRQWQVAAPKLASAIGVPNVVVTEPVPGV HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCE FELQLRIVDPLSSPLEWSSVPAAHSWSLSLGIDEMGVYQSLPLANVSGVVVGGVPGSGKT EEEEEEEECCCCCCCCCCCCCCCCCEEEEECCHHHHHHHCCCCCCCCEEEEECCCCCCCH AWLTSALGSFGASAAVQFAVIDGKGGQDLECLRARSCRFMNDDLELPEIAAILNDATGLV HHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH RDRIRQGNNIFGSSNFWDRGPTPQVPLVFVVIDECQAFLDPRQLVTKERKAIGAEIHASV HHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHCCHHHHHHHHHHHHCHHHHHHH NYLVRKGRSAGVVSILSTQKPTADSLPTDIRDNASLRVCFGVQSTYAATAVLGDGWRSDT HHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHEECCCCCCCC DVSPLGMSSGVGVSFIGGHFRRFRAPFVRERVIATHSWRWSSLNRDPWELLRPELADGHV CCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHCCHHCCCCC RDS CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA