Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

Click here to switch to the map view.

The map label for this gene is 41406962

Identifier: 41406962

GI number: 41406962

Start: 886023

End: 886448

Strand: Direct

Name: 41406962

Synonym: MAP0864

Alternate gene names: NA

Gene position: 886023-886448 (Clockwise)

Preceding gene: 41406961

Following gene: 41406963

Centisome position: 18.34

GC content: 61.97

Gene sequence:

>426_bases
ATGGCTGACATCGCGAGACTGACGCTGAACGTGGATCCAGCATCTGTCCTTCTCTTGGGTACCGGTGGCACTTCCCGGAC
AAGGGCGGCATACGAGAATGGAGTGAAGACCGAAGCTAACGTCCAGCGTGGCGGTGTGGATGTTCACCGGTTGACCGGAG
TCGCCGTATCGGTGAGCGGAACTGGGCTCGACGGAGCGGTCGTGGAGACGTCGACCCCACTTGAGAATGTTCCTGCCGGC
GCGATTTTCCGCGCAGAAGGAGCTGCCGAAGTATCGGTACGCGCCGAGGGCCGGCAAGGATTCGGTGGGGGTAGTCCGCG
AGGTGTGCTTGCCGTGACGGTATTCGTCGAGCGGCTGGTTCCAATCGGAAACGCGAATGATGTAGTGCGCTCATCGCCTC
AGAGGCGCCCGGCGGCGGGTGAGTAA

Upstream 100 bases:

>100_bases
GCTGATTCGGGCGACGACGAGGAGGGGCCACTGATCCTTGAACTACGCCAGTAGTGGCAATCAAAAGCACTGTTACGAAA
GAACGAATTGAGGAAATCAA

Downstream 100 bases:

>100_bases
CCGTGCGCGGCCAGTATGGATATACATCGCCGGCGTTGACCGCGGTGAGATGCCTCTCCGATGCTCGATGGACAAGAAGC
ATGTTGGAGCTCGTTGGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MADIARLTLNVDPASVLLLGTGGTSRTRAAYENGVKTEANVQRGGVDVHRLTGVAVSVSGTGLDGAVVETSTPLENVPAG
AIFRAEGAAEVSVRAEGRQGFGGGSPRGVLAVTVFVERLVPIGNANDVVRSSPQRRPAAGE

Sequences:

>Translated_141_residues
MADIARLTLNVDPASVLLLGTGGTSRTRAAYENGVKTEANVQRGGVDVHRLTGVAVSVSGTGLDGAVVETSTPLENVPAG
AIFRAEGAAEVSVRAEGRQGFGGGSPRGVLAVTVFVERLVPIGNANDVVRSSPQRRPAAGE
>Mature_140_residues
ADIARLTLNVDPASVLLLGTGGTSRTRAAYENGVKTEANVQRGGVDVHRLTGVAVSVSGTGLDGAVVETSTPLENVPAGA
IFRAEGAAEVSVRAEGRQGFGGGSPRGVLAVTVFVERLVPIGNANDVVRSSPQRRPAAGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14304; Mature: 14173

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADIARLTLNVDPASVLLLGTGGTSRTRAAYENGVKTEANVQRGGVDVHRLTGVAVSVSG
CCCCEEEEEECCCCEEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCEEEEEEEEEEEECC
TGLDGAVVETSTPLENVPAGAIFRAEGAAEVSVRAEGRQGFGGGSPRGVLAVTVFVERLV
CCCCCEEEECCCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCHHHHEEHHHHHC
PIGNANDVVRSSPQRRPAAGE
CCCCCCHHHHCCCCCCCCCCC
>Mature Secondary Structure 
ADIARLTLNVDPASVLLLGTGGTSRTRAAYENGVKTEANVQRGGVDVHRLTGVAVSVSG
CCCEEEEEECCCCEEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCEEEEEEEEEEEECC
TGLDGAVVETSTPLENVPAGAIFRAEGAAEVSVRAEGRQGFGGGSPRGVLAVTVFVERLV
CCCCCEEEECCCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCHHHHEEHHHHHC
PIGNANDVVRSSPQRRPAAGE
CCCCCCHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA