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The map label for this gene is yjfR [C]

Identifier: 41406939

GI number: 41406939

Start: 860076

End: 861185

Strand: Direct

Name: yjfR [C]

Synonym: MAP0841

Alternate gene names: 41406939

Gene position: 860076-861185 (Clockwise)

Preceding gene: 41406938

Following gene: 41406940

Centisome position: 17.81

GC content: 72.52

Gene sequence:

>1110_bases
ATGCGGGGGACGCTTCGGCTGGTCGCCGGGACGGCGTCGCTGGCCGCCGGCGGTTGGCTGGTGCGCGCCCTGCACGGCGC
CCCGGACGCCCTGGGCGCCGACCCCGCGTCGATCGCGACCGTGACGTCCGGCTCGCCGCACTTCCGCGACGGCGCCTTCG
TCAACCTCGAGCCCGCCTCCGAAATCAAGATGGACCGCGAGCAGCTGCGGCTGATCGCCTGGGAGCTGATCGCGAACCGG
GGCGGCAGCCGTCCGCCGGCGGCGATCCCGCTGGCCTCACCGGGGGTCGTCGACGCCGACCCCAGCCGGCTGGCGGTCAG
CTGGTTCGGCCACTCCACGGCGCTGCTGGAAATCGACGGGTACCGGGTGCTCACCGATCCGGTGTGGAGCGAGCGGTGTT
CGCCGTCCGACATCGTGGGGCCGCAACGGCTGCATCCGCCGCCGATCCAACTCGAAGGGCTGCCCGCCGTCGATGCGGTG
GTGATCAGCCACGACCACTACGACCACCTCGACATCGACACCGTCCGGGCGCTGGCCCGCACCCAGCGCGCCCCGTTTTT
CGTGCCGCTGGGTGTCGGCGCCCACCTGCGCCGGTGGGGGATCCCCGAGCAGCGCATCGTCGAGCTCGACTGGCACCAGA
GCGGCAAGGTCGACGAGCTGACCGTGACCTGCGTGCCGGCGCGGCACTTCTCGGGACGCTTCCTGGACCGCAATACCACG
CTGTGGGCGTCGTGGGCGTTGGCCGGCCCGACCCATCGCGCCTACTTCGGCGGCGACACCGGCTACACCAAGACCTTCGC
CCAGACCGGCGCCGAGCACGGGCCGTTCGACCTGACCCTGCTGCCCATCGGGGCCTACAACACGGCCTGGCCGGACGTCC
ACATGAACCCCGAGGAAGCGGTGCGGGCACACCGGGACGTCACCGACGACGGACTGCTGGTGCCGATCCACTGGGGCACC
TTCCGATTGGCGCCGCACCCGTGGGCCGAACCCGTTGAGCGCCTGCTCGCCGCCGCCGAGCCGGCGAAGGTGAAGGTGGC
GGTGCCGGTCCCCGGTCAGCGCATCGATCCCGCGGCCCCGCAGAAACCCGACCCGTGGTGGCGGCTCTGA

Upstream 100 bases:

>100_bases
AGGAACTGTTCGACAAGGCCTGGGGCAGCCAGGACGTCATCGAAGCCCAGGTCGCCCGAATAGAGAAGCGGCCGCCGAAG
TTCCAGGGGGCCTGACGATC

Downstream 100 bases:

>100_bases
ATCTGCCGTCGCCGCGTTAGTGTTCGCGCATGAGCAAACGCGCGGCGGTCCTGACGGCGGTGCTGCTCGGGTTGACCGGA
TGCGGCTCCGCGCAGCAACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MRGTLRLVAGTASLAAGGWLVRALHGAPDALGADPASIATVTSGSPHFRDGAFVNLEPASEIKMDREQLRLIAWELIANR
GGSRPPAAIPLASPGVVDADPSRLAVSWFGHSTALLEIDGYRVLTDPVWSERCSPSDIVGPQRLHPPPIQLEGLPAVDAV
VISHDHYDHLDIDTVRALARTQRAPFFVPLGVGAHLRRWGIPEQRIVELDWHQSGKVDELTVTCVPARHFSGRFLDRNTT
LWASWALAGPTHRAYFGGDTGYTKTFAQTGAEHGPFDLTLLPIGAYNTAWPDVHMNPEEAVRAHRDVTDDGLLVPIHWGT
FRLAPHPWAEPVERLLAAAEPAKVKVAVPVPGQRIDPAAPQKPDPWWRL

Sequences:

>Translated_369_residues
MRGTLRLVAGTASLAAGGWLVRALHGAPDALGADPASIATVTSGSPHFRDGAFVNLEPASEIKMDREQLRLIAWELIANR
GGSRPPAAIPLASPGVVDADPSRLAVSWFGHSTALLEIDGYRVLTDPVWSERCSPSDIVGPQRLHPPPIQLEGLPAVDAV
VISHDHYDHLDIDTVRALARTQRAPFFVPLGVGAHLRRWGIPEQRIVELDWHQSGKVDELTVTCVPARHFSGRFLDRNTT
LWASWALAGPTHRAYFGGDTGYTKTFAQTGAEHGPFDLTLLPIGAYNTAWPDVHMNPEEAVRAHRDVTDDGLLVPIHWGT
FRLAPHPWAEPVERLLAAAEPAKVKVAVPVPGQRIDPAAPQKPDPWWRL
>Mature_369_residues
MRGTLRLVAGTASLAAGGWLVRALHGAPDALGADPASIATVTSGSPHFRDGAFVNLEPASEIKMDREQLRLIAWELIANR
GGSRPPAAIPLASPGVVDADPSRLAVSWFGHSTALLEIDGYRVLTDPVWSERCSPSDIVGPQRLHPPPIQLEGLPAVDAV
VISHDHYDHLDIDTVRALARTQRAPFFVPLGVGAHLRRWGIPEQRIVELDWHQSGKVDELTVTCVPARHFSGRFLDRNTT
LWASWALAGPTHRAYFGGDTGYTKTFAQTGAEHGPFDLTLLPIGAYNTAWPDVHMNPEEAVRAHRDVTDDGLLVPIHWGT
FRLAPHPWAEPVERLLAAAEPAKVKVAVPVPGQRIDPAAPQKPDPWWRL

Specific function: Unknown

COG id: COG2220

COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To K.pneumoniae romA [H]

Homologues:

Organism=Homo sapiens, GI170932483, Length=245, Percent_Identity=42.8571428571429, Blast_Score=196, Evalue=2e-50,
Organism=Homo sapiens, GI170932481, Length=245, Percent_Identity=42.8571428571429, Blast_Score=196, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI17543102, Length=277, Percent_Identity=37.5451263537906, Blast_Score=189, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI25148824, Length=277, Percent_Identity=38.2671480144404, Blast_Score=189, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI17543100, Length=277, Percent_Identity=37.5451263537906, Blast_Score=189, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI17543104, Length=247, Percent_Identity=40.080971659919, Blast_Score=181, Evalue=5e-46,
Organism=Saccharomyces cerevisiae, GI6325154, Length=247, Percent_Identity=32.3886639676113, Blast_Score=121, Evalue=2e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40204; Mature: 40204

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGTLRLVAGTASLAAGGWLVRALHGAPDALGADPASIATVTSGSPHFRDGAFVNLEPAS
CCCEEEEEECCCHHHCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCEEEECCHH
EIKMDREQLRLIAWELIANRGGSRPPAAIPLASPGVVDADPSRLAVSWFGHSTALLEIDG
HHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECC
YRVLTDPVWSERCSPSDIVGPQRLHPPPIQLEGLPAVDAVVISHDHYDHLDIDTVRALAR
EEEEECCHHHCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEECCCCCCCCHHHHHHHHH
TQRAPFFVPLGVGAHLRRWGIPEQRIVELDWHQSGKVDELTVTCVPARHFSGRFLDRNTT
HCCCCEEEEECCCHHHHHCCCCHHHEEEECCCCCCCCEEEEEEEEECCCCCCEEECCCCE
LWASWALAGPTHRAYFGGDTGYTKTFAQTGAEHGPFDLTLLPIGAYNTAWPDVHMNPEEA
EEEEEEECCCCCEEEECCCCCCHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHH
VRAHRDVTDDGLLVPIHWGTFRLAPHPWAEPVERLLAAAEPAKVKVAVPVPGQRIDPAAP
HHHHCCCCCCCEEEEEECCEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCC
QKPDPWWRL
CCCCCCCCC
>Mature Secondary Structure
MRGTLRLVAGTASLAAGGWLVRALHGAPDALGADPASIATVTSGSPHFRDGAFVNLEPAS
CCCEEEEEECCCHHHCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCEEEECCHH
EIKMDREQLRLIAWELIANRGGSRPPAAIPLASPGVVDADPSRLAVSWFGHSTALLEIDG
HHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECC
YRVLTDPVWSERCSPSDIVGPQRLHPPPIQLEGLPAVDAVVISHDHYDHLDIDTVRALAR
EEEEECCHHHCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEECCCCCCCCHHHHHHHHH
TQRAPFFVPLGVGAHLRRWGIPEQRIVELDWHQSGKVDELTVTCVPARHFSGRFLDRNTT
HCCCCEEEEECCCHHHHHCCCCHHHEEEECCCCCCCCEEEEEEEEECCCCCCEEECCCCE
LWASWALAGPTHRAYFGGDTGYTKTFAQTGAEHGPFDLTLLPIGAYNTAWPDVHMNPEEA
EEEEEEECCCCCEEEECCCCCCHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHH
VRAHRDVTDDGLLVPIHWGTFRLAPHPWAEPVERLLAAAEPAKVKVAVPVPGQRIDPAAP
HHHHCCCCCCCEEEEEECCEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCC
QKPDPWWRL
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]