| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406914
Identifier: 41406914
GI number: 41406914
Start: 834749
End: 835681
Strand: Direct
Name: 41406914
Synonym: MAP0816
Alternate gene names: NA
Gene position: 834749-835681 (Clockwise)
Preceding gene: 41406910
Following gene: 41406917
Centisome position: 17.28
GC content: 72.78
Gene sequence:
>933_bases GTGGCTCGTCAACCTACTATTGGAACCGCGATGCAGACACAAGACAGCGTGACCACACCTCTCGAGGAGTCCTCGATGGC GACCGCGGGCGAGTGGCCCGAAGGGTTGGCGGCGGTGCTCACCGGCGCTGCCGACCAGGCCAGGGCCGCCGTCGTGGAGT TCAGCGGGGCGGAGACGGTCGGCGACTATCTGGCCGTCGGCTACGAAGACCCGTACGCCGCCACGCACCGGTTCCTGGCG CACCTGCCCGGCTACCAGGGCTGGCAGTGGGCGGTCGTGGTGGCCGCCTATCCCGGCGCCGACCACGCCACCATCAGCGA AGTGGTGTTGGTGCCGGGCCCGACGGCATTGCTGGCGCCGGAGTGGGTGCCGTGGGAACAGCGGGTGCGGCCCGGCGATC TCAGCCCGGGCGACCTGCTGGCTCCCGCCGCCAACGATCCGCGGCTGGTGCCCGGCTACACCGCCAGCGGCGACCCGCAG GTCGACGAGACCGCCGCCGAGATCGGGCTGGGCCGGCGCTGGGTGATGAGCGCCGAGGGCCGCGCGGAGGCCGCCGAACG CTGGCACACCGGCGCGTACGGCCCCGACTCGCCGATGGCCCGATCGACCAAGCGGGTGTGCCGCGACTGCGGGTTCTTCC TGCCGCTGTCGGGATCCCTGGGCAGGATGTTCGGGGTGTGCGGCAACGAGCTGTCGGCCGACGGGCACGTCGTCGACATG CACTACGGCTGCGGCGCGCACTCGGACACCCCCGCCCCGGCGGGCACCGGCTCGCCCGCCTACGAGCCCTACGACGACGG CCTGCTCGACGTGACGCAGACACCGGTCGAGCCGACGCCGCCGCCCGAGACGTCGCAAGCCGAGCCCGAGACGTCAGAAG TCGAGCCGGAGACGCAAGCCGAGCCGGAGCCCGAGACCGAGACGCCCAGCTAG
Upstream 100 bases:
>100_bases GCCCGGCTTGGCGGCCACCCGGCCCGGATCGCCTTGCCGCCGTCCAGACACGCCCCGATTCTCCCCTATGCCGACTCCGT GCGTCTGCAGGTAACGGGGC
Downstream 100 bases:
>100_bases CGCCGGTCCGTGTTCTCGGCGGCGGCCTTGATGCGCGCCAACGAGGCGTTCATGCCGTCGAGCAATTCGCGTTCGAAGTT GTCGGTGCCGCCGAGGAACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MARQPTIGTAMQTQDSVTTPLEESSMATAGEWPEGLAAVLTGAADQARAAVVEFSGAETVGDYLAVGYEDPYAATHRFLA HLPGYQGWQWAVVVAAYPGADHATISEVVLVPGPTALLAPEWVPWEQRVRPGDLSPGDLLAPAANDPRLVPGYTASGDPQ VDETAAEIGLGRRWVMSAEGRAEAAERWHTGAYGPDSPMARSTKRVCRDCGFFLPLSGSLGRMFGVCGNELSADGHVVDM HYGCGAHSDTPAPAGTGSPAYEPYDDGLLDVTQTPVEPTPPPETSQAEPETSEVEPETQAEPEPETETPS
Sequences:
>Translated_310_residues MARQPTIGTAMQTQDSVTTPLEESSMATAGEWPEGLAAVLTGAADQARAAVVEFSGAETVGDYLAVGYEDPYAATHRFLA HLPGYQGWQWAVVVAAYPGADHATISEVVLVPGPTALLAPEWVPWEQRVRPGDLSPGDLLAPAANDPRLVPGYTASGDPQ VDETAAEIGLGRRWVMSAEGRAEAAERWHTGAYGPDSPMARSTKRVCRDCGFFLPLSGSLGRMFGVCGNELSADGHVVDM HYGCGAHSDTPAPAGTGSPAYEPYDDGLLDVTQTPVEPTPPPETSQAEPETSEVEPETQAEPEPETETPS >Mature_309_residues ARQPTIGTAMQTQDSVTTPLEESSMATAGEWPEGLAAVLTGAADQARAAVVEFSGAETVGDYLAVGYEDPYAATHRFLAH LPGYQGWQWAVVVAAYPGADHATISEVVLVPGPTALLAPEWVPWEQRVRPGDLSPGDLLAPAANDPRLVPGYTASGDPQV DETAAEIGLGRRWVMSAEGRAEAAERWHTGAYGPDSPMARSTKRVCRDCGFFLPLSGSLGRMFGVCGNELSADGHVVDMH YGCGAHSDTPAPAGTGSPAYEPYDDGLLDVTQTPVEPTPPPETSQAEPETSEVEPETQAEPEPETETPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021391 [H]
Pfam domain/function: PF11228 DUF3027 [H]
EC number: NA
Molecular weight: Translated: 32655; Mature: 32524
Theoretical pI: Translated: 3.99; Mature: 3.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARQPTIGTAMQTQDSVTTPLEESSMATAGEWPEGLAAVLTGAADQARAAVVEFSGAETV CCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHEEEEEECCCHHH GDYLAVGYEDPYAATHRFLAHLPGYQGWQWAVVVAAYPGADHATISEVVLVPGPTALLAP HHHHEECCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCCCC EWVPWEQRVRPGDLSPGDLLAPAANDPRLVPGYTASGDPQVDETAAEIGLGRRWVMSAEG CCCCHHHCCCCCCCCCCCEECCCCCCCEECCCCCCCCCCCHHHHHHHHCCCCEEEECCCC RAEAAERWHTGAYGPDSPMARSTKRVCRDCGFFLPLSGSLGRMFGVCGNELSADGHVVDM CHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCHHHHHHHCCCCCCCCCCEEEE HYGCGAHSDTPAPAGTGSPAYEPYDDGLLDVTQTPVEPTPPPETSQAEPETSEVEPETQA ECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EPEPETETPS CCCCCCCCCC >Mature Secondary Structure ARQPTIGTAMQTQDSVTTPLEESSMATAGEWPEGLAAVLTGAADQARAAVVEFSGAETV CCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHEEEEEECCCHHH GDYLAVGYEDPYAATHRFLAHLPGYQGWQWAVVVAAYPGADHATISEVVLVPGPTALLAP HHHHEECCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCCCC EWVPWEQRVRPGDLSPGDLLAPAANDPRLVPGYTASGDPQVDETAAEIGLGRRWVMSAEG CCCCHHHCCCCCCCCCCCEECCCCCCCEECCCCCCCCCCCHHHHHHHHCCCCEEEECCCC RAEAAERWHTGAYGPDSPMARSTKRVCRDCGFFLPLSGSLGRMFGVCGNELSADGHVVDM CHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCHHHHHHHCCCCCCCCCCEEEE HYGCGAHSDTPAPAGTGSPAYEPYDDGLLDVTQTPVEPTPPPETSQAEPETSEVEPETQA ECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EPEPETETPS CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]