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The map label for this gene is 41406917

Identifier: 41406917

GI number: 41406917

Start: 836645

End: 837076

Strand: Direct

Name: 41406917

Synonym: MAP0819

Alternate gene names: NA

Gene position: 836645-837076 (Clockwise)

Preceding gene: 41406914

Following gene: 41406918

Centisome position: 17.32

GC content: 71.3

Gene sequence:

>432_bases
ATGCCTGACAGCGATGCCCGGCTGGCCAGCGACCTGTCACTGGCTGTCATGCGGCTGGCCCGCCAACTGCGATTCCGCAA
CCCCTCGTCGCCGGTGTCGCTGTCCCAACTGTCGGCGCTGGCGATGCTGGCCAACGAGGGCCCGATGACGCCCGGGGCGC
TGGCGATCCGCGAACGCGTCCGGCCCCCGTCGATGACCCGGGTGATCGCCTCGCTGGCCGAGATGGGCCTGGTGGACCGC
ACCCCGCATCCCGTCGACGGCCGGCAGGTGCTGGTCTCGGTCTCCGAGGCCGGGGCCGAATTGGTCAAGGCCAACCGGCG
CGCCCGTCAGGAGTGGTTGGCCAAGCGGCTGTCCACGCTGGACGACGACGAGCGCGAAACCCTGCGCCACGCGGCCGATC
TGATGCTGGCCCTGGTCGACGAAGGCCCGTGA

Upstream 100 bases:

>100_bases
GCGTTTCGATGAAACGGCGGGCGGTTCGGCCGGGGGCGTCAACACCCGTCGTTCACCGGTTCGTGTCCCGGTTTCTCAGG
CTTGCGTGTAACCTCGCGCC

Downstream 100 bases:

>100_bases
ACACCGATGCGCTGGACGTTCGCGACGTTGACGACCCCGACGACCCGAGGCTCGACGACTTCCGCGACCTGAACAGTGTC
GATCGGCGTCCCGATCTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MPDSDARLASDLSLAVMRLARQLRFRNPSSPVSLSQLSALAMLANEGPMTPGALAIRERVRPPSMTRVIASLAEMGLVDR
TPHPVDGRQVLVSVSEAGAELVKANRRARQEWLAKRLSTLDDDERETLRHAADLMLALVDEGP

Sequences:

>Translated_143_residues
MPDSDARLASDLSLAVMRLARQLRFRNPSSPVSLSQLSALAMLANEGPMTPGALAIRERVRPPSMTRVIASLAEMGLVDR
TPHPVDGRQVLVSVSEAGAELVKANRRARQEWLAKRLSTLDDDERETLRHAADLMLALVDEGP
>Mature_142_residues
PDSDARLASDLSLAVMRLARQLRFRNPSSPVSLSQLSALAMLANEGPMTPGALAIRERVRPPSMTRVIASLAEMGLVDRT
PHPVDGRQVLVSVSEAGAELVKANRRARQEWLAKRLSTLDDDERETLRHAADLMLALVDEGP

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 15618; Mature: 15487

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDSDARLASDLSLAVMRLARQLRFRNPSSPVSLSQLSALAMLANEGPMTPGALAIRERV
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHC
RPPSMTRVIASLAEMGLVDRTPHPVDGRQVLVSVSEAGAELVKANRRARQEWLAKRLSTL
CCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DDDERETLRHAADLMLALVDEGP
CCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PDSDARLASDLSLAVMRLARQLRFRNPSSPVSLSQLSALAMLANEGPMTPGALAIRERV
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHC
RPPSMTRVIASLAEMGLVDRTPHPVDGRQVLVSVSEAGAELVKANRRARQEWLAKRLSTL
CCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DDDERETLRHAADLMLALVDEGP
CCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]