| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is 41406857
Identifier: 41406857
GI number: 41406857
Start: 782169
End: 783431
Strand: Direct
Name: 41406857
Synonym: MAP0759
Alternate gene names: NA
Gene position: 782169-783431 (Clockwise)
Preceding gene: 41406856
Following gene: 41406858
Centisome position: 16.19
GC content: 65.95
Gene sequence:
>1263_bases GTGACGCAGAATGTGCCAGCCGGTCGCGGCGCGATCGCCGGTCGACCCGCGCGGCCGGGCCATGCCCACCCGCCCGCGGG GCGGAATTACCTGCCGCCCCTGCTCGGACTGGCCACCATCCTCATCATCGGCCTGATCTTCGCCGTGGCGGTGGGCCTGT TTCAGGGTTCGTTCACTGAAACCGTTCCGGTGACGGTGATTTCGCAACGAGCCGGTCTGGTCATGAACCCGGACGCCAAG GTCAAGATGCGCGGCGTGCAGGTGGGCAAGGTCGCCTCCATCGAATCACTGCCCAACGGCCAAGCGGCCATTCACCTCGC GATGGACCCGTCGCAGATGCACTTCATCCCGAGCAACGTGCTGGTCGACATCGCGTCGTCGACGGTGTTCGGCGCCAAGT CGATCCAACTGGTGGAACCCGCCCAACCCTCGGCCCAGCGGCTGCGCGCCGGTCAGACGCTGCAGGGCCAGCACGTCATG GTCGAGATCAACACGGTGTTCCAGGAATTGGTGTCGGTGCTGTCGCACATCGACCCGCCGAAACTCAACGAGTCTCTGGG TGCGCTTGCCCAAGCGTTCAGTGGGCGCGGCCCACAGCTGGGCCAGTCGCTCAGCGACCTGGATTCGTTCCTCGCCCGGC TGGAGCCGAGCCTTTCCGCGTTCCGCCATGACCTCTCCGTCCTGCCGACGGTGTCGAACGCCTATGCCGACGCGGCGCCC GACCTGGTGAAGACCGCGGCCAACGCGACCCGGATCAGCAAGACACTGGTCGACGAACAGCACAACCTGGACGCGCTGCT GATCAGCGCGATCGGCTTGGCCGACATCGGCAATGACGTCTTGTCGACGAACCGCCAACCGCTGACGAACGTGCTGCATC TACTCGTGCCGACGACCGATCTGACCAACGAGTACGGGCCGGCGCTCACTTGCAGTTTCGGCGGGCTGATAACCATCGCG CACGGTCCGCCGCTGTCGGAACCGAGCATCAACATCTCGGCGAGCCTCACCTGGGGCGGCGAACGCTATCGCTACCCGAC GAACCTGCCCAAGGTCGCGGCCACCGGCGGCCCCAAGTGCATGGGCCTGCCGACCCTGCCGTTCAACACCAACCCGCCGC AATTCATCACCGACATCGGGGCCAACCCGGTGGGATACGGAAACCCGCAGCTGCTGATCAACTCCGATCTGCTCAAGCAG CTGTTGTACGGGCCGATCGCGGGCCCGCCCCGCAACTCCGCACAGGTGGGGATGCCCGGATGA
Upstream 100 bases:
>100_bases CTCATCGTCGTGGTGTCGGTGACGCTGTTGGTCTCGCTGTCTATCTACGGTACGAACGGCAACTTCAACCTTTCCGGTTA GCAGAGGAGGTGAAACGGCA
Downstream 100 bases:
>100_bases GAACACGCGCCACACTGATCAAGTTCGCCATCTTCGCGGTCGTGATGGCGATGCTGACCGCCTTCCTGTTCTTCATCTTC GGCCAGTACCGCACGGGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: Mce Family Protein; Secreted Protein; MCE-Family A; Virulence Factor; Mce Family A; Mammalian Cell Entry Related Domain-Containing Protein; MCE Family Protein; MCE-Family Protein; Mce-Related Protein; Cell Invasion Protein; MCE-Family; Virulence Factor MCE-Like Protein
Number of amino acids: Translated: 420; Mature: 419
Protein sequence:
>420_residues MTQNVPAGRGAIAGRPARPGHAHPPAGRNYLPPLLGLATILIIGLIFAVAVGLFQGSFTETVPVTVISQRAGLVMNPDAK VKMRGVQVGKVASIESLPNGQAAIHLAMDPSQMHFIPSNVLVDIASSTVFGAKSIQLVEPAQPSAQRLRAGQTLQGQHVM VEINTVFQELVSVLSHIDPPKLNESLGALAQAFSGRGPQLGQSLSDLDSFLARLEPSLSAFRHDLSVLPTVSNAYADAAP DLVKTAANATRISKTLVDEQHNLDALLISAIGLADIGNDVLSTNRQPLTNVLHLLVPTTDLTNEYGPALTCSFGGLITIA HGPPLSEPSINISASLTWGGERYRYPTNLPKVAATGGPKCMGLPTLPFNTNPPQFITDIGANPVGYGNPQLLINSDLLKQ LLYGPIAGPPRNSAQVGMPG
Sequences:
>Translated_420_residues MTQNVPAGRGAIAGRPARPGHAHPPAGRNYLPPLLGLATILIIGLIFAVAVGLFQGSFTETVPVTVISQRAGLVMNPDAK VKMRGVQVGKVASIESLPNGQAAIHLAMDPSQMHFIPSNVLVDIASSTVFGAKSIQLVEPAQPSAQRLRAGQTLQGQHVM VEINTVFQELVSVLSHIDPPKLNESLGALAQAFSGRGPQLGQSLSDLDSFLARLEPSLSAFRHDLSVLPTVSNAYADAAP DLVKTAANATRISKTLVDEQHNLDALLISAIGLADIGNDVLSTNRQPLTNVLHLLVPTTDLTNEYGPALTCSFGGLITIA HGPPLSEPSINISASLTWGGERYRYPTNLPKVAATGGPKCMGLPTLPFNTNPPQFITDIGANPVGYGNPQLLINSDLLKQ LLYGPIAGPPRNSAQVGMPG >Mature_419_residues TQNVPAGRGAIAGRPARPGHAHPPAGRNYLPPLLGLATILIIGLIFAVAVGLFQGSFTETVPVTVISQRAGLVMNPDAKV KMRGVQVGKVASIESLPNGQAAIHLAMDPSQMHFIPSNVLVDIASSTVFGAKSIQLVEPAQPSAQRLRAGQTLQGQHVMV EINTVFQELVSVLSHIDPPKLNESLGALAQAFSGRGPQLGQSLSDLDSFLARLEPSLSAFRHDLSVLPTVSNAYADAAPD LVKTAANATRISKTLVDEQHNLDALLISAIGLADIGNDVLSTNRQPLTNVLHLLVPTTDLTNEYGPALTCSFGGLITIAH GPPLSEPSINISASLTWGGERYRYPTNLPKVAATGGPKCMGLPTLPFNTNPPQFITDIGANPVGYGNPQLLINSDLLKQL LYGPIAGPPRNSAQVGMPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44038; Mature: 43907
Theoretical pI: Translated: 7.37; Mature: 7.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQNVPAGRGAIAGRPARPGHAHPPAGRNYLPPLLGLATILIIGLIFAVAVGLFQGSFTE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC TVPVTVISQRAGLVMNPDAKVKMRGVQVGKVASIESLPNGQAAIHLAMDPSQMHFIPSNV CCCEEEEECCCCEEECCCCCEEEECEEECCCHHHHCCCCCCEEEEEEECCCCEEEECCHH LVDIASSTVFGAKSIQLVEPAQPSAQRLRAGQTLQGQHVMVEINTVFQELVSVLSHIDPP HHHHHCCCEECCCCEEEECCCCCHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCC KLNESLGALAQAFSGRGPQLGQSLSDLDSFLARLEPSLSAFRHDLSVLPTVSNAYADAAP CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHCCH DLVKTAANATRISKTLVDEQHNLDALLISAIGLADIGNDVLSTNRQPLTNVLHLLVPTTD HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHCCCH LTNEYGPALTCSFGGLITIAHGPPLSEPSINISASLTWGGERYRYPTNLPKVAATGGPKC HCCCCCCEEEEECCCEEEEECCCCCCCCCEEEEEEEEECCCEECCCCCCCCEECCCCCCC MGLPTLPFNTNPPQFITDIGANPVGYGNPQLLINSDLLKQLLYGPIAGPPRNSAQVGMPG CCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEECHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure TQNVPAGRGAIAGRPARPGHAHPPAGRNYLPPLLGLATILIIGLIFAVAVGLFQGSFTE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC TVPVTVISQRAGLVMNPDAKVKMRGVQVGKVASIESLPNGQAAIHLAMDPSQMHFIPSNV CCCEEEEECCCCEEECCCCCEEEECEEECCCHHHHCCCCCCEEEEEEECCCCEEEECCHH LVDIASSTVFGAKSIQLVEPAQPSAQRLRAGQTLQGQHVMVEINTVFQELVSVLSHIDPP HHHHHCCCEECCCCEEEECCCCCHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCC KLNESLGALAQAFSGRGPQLGQSLSDLDSFLARLEPSLSAFRHDLSVLPTVSNAYADAAP CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHCCH DLVKTAANATRISKTLVDEQHNLDALLISAIGLADIGNDVLSTNRQPLTNVLHLLVPTTD HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHCCCH LTNEYGPALTCSFGGLITIAHGPPLSEPSINISASLTWGGERYRYPTNLPKVAATGGPKC HCCCCCCEEEEECCCEEEEECCCCCCCCCEEEEEEEEECCCEECCCCCCCCEECCCCCCC MGLPTLPFNTNPPQFITDIGANPVGYGNPQLLINSDLLKQLLYGPIAGPPRNSAQVGMPG CCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEECHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA