| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406858
Identifier: 41406858
GI number: 41406858
Start: 783428
End: 784450
Strand: Direct
Name: 41406858
Synonym: MAP0760
Alternate gene names: NA
Gene position: 783428-784450 (Clockwise)
Preceding gene: 41406857
Following gene: 41406859
Centisome position: 16.22
GC content: 64.13
Gene sequence:
>1023_bases ATGAGAACACGCGCCACACTGATCAAGTTCGCCATCTTCGCGGTCGTGATGGCGATGCTGACCGCCTTCCTGTTCTTCAT CTTCGGCCAGTACCGCACGGGTGCGACGAACGGCTATTCGGCGGTGTTCACCGACGTGTCGCGGCTCAAGCCGGGGCAGT CGGTGCGGGTCGCCGGGATCCGGGTGGGCACGGTCAACAGCGTTTCGTTGCAGCCGGACAAAAAGGTCGTGGTGAAGTTC GACGCCGACCGCAACATCGTCCTCACCGAGGGCACCCGGGCGGCGGTCCGCTACCTGAACCTGGTCGGCGATCGCTACCT GGAACTGGTCGACGGTCCGGGCTCGCCCAAGCGGCTGCCGGCCGGCGGTCAGATTCCCGTCAGTCGCACCGCGCCGGCGC TCGATCTCGACCTGCTGCTCGGTGGGCTCAAACCCGTTACCCAGGGCCTGAATGCGCGCGACGTCAACGCGTTGACCTCA GGACTCCTGCAGGTCTTCCAGGGGCAGGGCGGCACTCTCGACTCGCTGTTCACCAAGGCGACGTCGTTCTCGAATGCCCT GGCCGACAACGACCAAACCGTGCAGCAACTGATCGACAACCTCAACATCGTGATCGGCACGATCTCCAAAGACGGCAAAC AATTTTCCGGCGCGGTCGATCGCCTCGAGCGTCTCGTCAGCGGACTGTCCGATGACCGCAACACCATCGGTTCCGCCATC GACGCCCTGGACCGGGGAACCGCCTCGCTGGCGGATCTGCTTGCCCAGGCGCGGCCGCCGCTGACCGGAACCATCGATCA GTTGAATCGGCTGGCGCCGATTCTCGACAACGACAAGGACCGCCTCGACGCGGCAATTGGCAAGGCGCCCAAGAACTATC GCAAGCTGGTTCGGCTCGGCGCGAACGGCGCCACCATCCCCTACTACCTATGCATGTTGGAGCTGCGCGGCACGGACCTT CAGGGCAAGACGGTGCGAGCTCCCATATTCCGTTCAGATGCTGGAAGGTGCACGGAACCCTGA
Upstream 100 bases:
>100_bases GAAACCCGCAGCTGCTGATCAACTCCGATCTGCTCAAGCAGCTGTTGTACGGGCCGATCGCGGGCCCGCCCCGCAACTCC GCACAGGTGGGGATGCCCGG
Downstream 100 bases:
>100_bases TGCTCAAGTATCGCGGATCTGGGCTCGTCAAGGCCGGGCTCATCGGTGTCGTCCTGGCGGTGATGGTGATCCTGGTGGGA CTGTCGCCGGACCGGTTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: Mce Family Protein; Secreted Protein; MCE-Family B; MCE Family Protein; MCE-Family Protein; Mammalian Cell Entry Related Domain Protein; MCE-Family C; Mce-Related Protein; Mce Family B; Virulence Factor MCE-Like Protein; Mce Family Protein Mce5B; MCE-Family; Mammalian Cell Entry-Like Domain-Containing Protein; Mce Family Lipob; Mce Family C; Mce-Family C
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MRTRATLIKFAIFAVVMAMLTAFLFFIFGQYRTGATNGYSAVFTDVSRLKPGQSVRVAGIRVGTVNSVSLQPDKKVVVKF DADRNIVLTEGTRAAVRYLNLVGDRYLELVDGPGSPKRLPAGGQIPVSRTAPALDLDLLLGGLKPVTQGLNARDVNALTS GLLQVFQGQGGTLDSLFTKATSFSNALADNDQTVQQLIDNLNIVIGTISKDGKQFSGAVDRLERLVSGLSDDRNTIGSAI DALDRGTASLADLLAQARPPLTGTIDQLNRLAPILDNDKDRLDAAIGKAPKNYRKLVRLGANGATIPYYLCMLELRGTDL QGKTVRAPIFRSDAGRCTEP
Sequences:
>Translated_340_residues MRTRATLIKFAIFAVVMAMLTAFLFFIFGQYRTGATNGYSAVFTDVSRLKPGQSVRVAGIRVGTVNSVSLQPDKKVVVKF DADRNIVLTEGTRAAVRYLNLVGDRYLELVDGPGSPKRLPAGGQIPVSRTAPALDLDLLLGGLKPVTQGLNARDVNALTS GLLQVFQGQGGTLDSLFTKATSFSNALADNDQTVQQLIDNLNIVIGTISKDGKQFSGAVDRLERLVSGLSDDRNTIGSAI DALDRGTASLADLLAQARPPLTGTIDQLNRLAPILDNDKDRLDAAIGKAPKNYRKLVRLGANGATIPYYLCMLELRGTDL QGKTVRAPIFRSDAGRCTEP >Mature_340_residues MRTRATLIKFAIFAVVMAMLTAFLFFIFGQYRTGATNGYSAVFTDVSRLKPGQSVRVAGIRVGTVNSVSLQPDKKVVVKF DADRNIVLTEGTRAAVRYLNLVGDRYLELVDGPGSPKRLPAGGQIPVSRTAPALDLDLLLGGLKPVTQGLNARDVNALTS GLLQVFQGQGGTLDSLFTKATSFSNALADNDQTVQQLIDNLNIVIGTISKDGKQFSGAVDRLERLVSGLSDDRNTIGSAI DALDRGTASLADLLAQARPPLTGTIDQLNRLAPILDNDKDRLDAAIGKAPKNYRKLVRLGANGATIPYYLCMLELRGTDL QGKTVRAPIFRSDAGRCTEP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36449; Mature: 36449
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTRATLIKFAIFAVVMAMLTAFLFFIFGQYRTGATNGYSAVFTDVSRLKPGQSVRVAGI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEEEEEE RVGTVNSVSLQPDKKVVVKFDADRNIVLTEGTRAAVRYLNLVGDRYLELVDGPGSPKRLP EEECCCCEEECCCCEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC AGGQIPVSRTAPALDLDLLLGGLKPVTQGLNARDVNALTSGLLQVFQGQGGTLDSLFTKA CCCCCCCCCCCCCHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHH TSFSNALADNDQTVQQLIDNLNIVIGTISKDGKQFSGAVDRLERLVSGLSDDRNTIGSAI HHHHHHHCCCHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH DALDRGTASLADLLAQARPPLTGTIDQLNRLAPILDNDKDRLDAAIGKAPKNYRKLVRLG HHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHC ANGATIPYYLCMLELRGTDLQGKTVRAPIFRSDAGRCTEP CCCCHHHHHHHHHHHCCCCCCCCEEECCCEECCCCCCCCC >Mature Secondary Structure MRTRATLIKFAIFAVVMAMLTAFLFFIFGQYRTGATNGYSAVFTDVSRLKPGQSVRVAGI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEEEEEE RVGTVNSVSLQPDKKVVVKFDADRNIVLTEGTRAAVRYLNLVGDRYLELVDGPGSPKRLP EEECCCCEEECCCCEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC AGGQIPVSRTAPALDLDLLLGGLKPVTQGLNARDVNALTSGLLQVFQGQGGTLDSLFTKA CCCCCCCCCCCCCHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHH TSFSNALADNDQTVQQLIDNLNIVIGTISKDGKQFSGAVDRLERLVSGLSDDRNTIGSAI HHHHHHHCCCHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH DALDRGTASLADLLAQARPPLTGTIDQLNRLAPILDNDKDRLDAAIGKAPKNYRKLVRLG HHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHC ANGATIPYYLCMLELRGTDLQGKTVRAPIFRSDAGRCTEP CCCCHHHHHHHHHHHCCCCCCCCEEECCCEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA