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The map label for this gene is legD1

Identifier: 52842900

GI number: 52842900

Start: 3046318

End: 3047175

Strand: Reverse

Name: legD1

Synonym: lpg2694

Alternate gene names: NA

Gene position: 3047175-3046318 (Counterclockwise)

Preceding gene: 52842901

Following gene: 52842899

Centisome position: 89.68

GC content: 36.13

Gene sequence:

>858_bases
CTGATTTTGATTTTTGAGGAGCATAGGATGCAACTTTCTTCTGAGCAATGTGATTTTTTTTTCACAAATGGATATTTGGT
AATAAATAATTTCTTTTCAGAATCTGTATGCGATCTATTAAAGCAACGCATTGAAACATTGCTTGAAAATAATCAGGCAG
AGATACCTAAAACAATTTTTTCCACGCAAACCAACGAACATGCAAAAAAACAATATTTCCTTGATTCTGGAGATAAAATT
CATTATTTTTTTGAGCCGGGTGCTTTTGATGAAGCCGGTGATTGGCTACGTCCTTTTAATCAATCAATTAATAAAATTGG
ACATGCTTTACATGAATTGGATCCTGTTTTTAGGCAATATTCCCGAGATGATCGAATTAAGAAGATAGCACATCAGCTTG
GGTTGAAAACACTTGGATTGGTCCAATCGATGTACATATTCAAACAGCCGGGAATAGGGGCTGAAGTACTTTGCCATCAG
GATAGTACCTATATTTTTGGTGAGGATAGTGATGCTTTAGGGTTTTGGTTTGCAATAGAAGATGCTACTTTGGAAAATGG
CTGTTTGGAAGTGATTCCAAGCCCGTGTACCACACCCTTAAAGCAGAGGATGTTTCGTCGAGAAAACGAAATTTATTTTG
AAAATTTCGATTCAAGTCCTTGGCCAGAAGAAAACAGTGTCCCTTTACCTGTTAAAAAAGGCGCTTTAATTATACTACAT
GGCAGAGTTCCACATAAAAGCCAGGCTAATTTTTCTAATCAATCCAGACATGCCTATACTTTGCATTTGGTTGATATTTC
ATTACCTTATCCTGAGAAAAATTGGTTGCAATGGCCTAATGGGATTCCTTGTTTATAA

Upstream 100 bases:

>100_bases
AACAATACCTAATCTTTGTGCGGGAAAGGCTTTTAATGAGAGCATTTCGCTTATGCTCATTAAAAGCTGTTTGCCCTTAC
CCTGGTGATTTCCCCAAGTA

Downstream 100 bases:

>100_bases
CATCACTAGTTTAGAGATCTCAGAGAATACAACATCAAAAGCTTCCAATTTTTAGAAAATTGTGTTGGAGAACTCTATAA
TTTACAAGAGGCTCTTGGTA

Product: phytanoyl-CoA dioxygenase

Products: NA

Alternate protein names: Phytanoyl-CoA Dioxygenase Family Protein

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MILIFEEHRMQLSSEQCDFFFTNGYLVINNFFSESVCDLLKQRIETLLENNQAEIPKTIFSTQTNEHAKKQYFLDSGDKI
HYFFEPGAFDEAGDWLRPFNQSINKIGHALHELDPVFRQYSRDDRIKKIAHQLGLKTLGLVQSMYIFKQPGIGAEVLCHQ
DSTYIFGEDSDALGFWFAIEDATLENGCLEVIPSPCTTPLKQRMFRRENEIYFENFDSSPWPEENSVPLPVKKGALIILH
GRVPHKSQANFSNQSRHAYTLHLVDISLPYPEKNWLQWPNGIPCL

Sequences:

>Translated_285_residues
MILIFEEHRMQLSSEQCDFFFTNGYLVINNFFSESVCDLLKQRIETLLENNQAEIPKTIFSTQTNEHAKKQYFLDSGDKI
HYFFEPGAFDEAGDWLRPFNQSINKIGHALHELDPVFRQYSRDDRIKKIAHQLGLKTLGLVQSMYIFKQPGIGAEVLCHQ
DSTYIFGEDSDALGFWFAIEDATLENGCLEVIPSPCTTPLKQRMFRRENEIYFENFDSSPWPEENSVPLPVKKGALIILH
GRVPHKSQANFSNQSRHAYTLHLVDISLPYPEKNWLQWPNGIPCL
>Mature_285_residues
MILIFEEHRMQLSSEQCDFFFTNGYLVINNFFSESVCDLLKQRIETLLENNQAEIPKTIFSTQTNEHAKKQYFLDSGDKI
HYFFEPGAFDEAGDWLRPFNQSINKIGHALHELDPVFRQYSRDDRIKKIAHQLGLKTLGLVQSMYIFKQPGIGAEVLCHQ
DSTYIFGEDSDALGFWFAIEDATLENGCLEVIPSPCTTPLKQRMFRRENEIYFENFDSSPWPEENSVPLPVKKGALIILH
GRVPHKSQANFSNQSRHAYTLHLVDISLPYPEKNWLQWPNGIPCL

Specific function: Unknown

COG id: COG5285

COG function: function code Q; Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI154937350, Length=284, Percent_Identity=44.3661971830986, Blast_Score=222, Evalue=2e-58,
Organism=Homo sapiens, GI154937352, Length=284, Percent_Identity=41.1971830985916, Blast_Score=188, Evalue=6e-48,
Organism=Homo sapiens, GI154937348, Length=157, Percent_Identity=43.312101910828, Blast_Score=122, Evalue=3e-28,
Organism=Caenorhabditis elegans, GI17544346, Length=268, Percent_Identity=40.2985074626866, Blast_Score=197, Evalue=6e-51,
Organism=Drosophila melanogaster, GI161078170, Length=284, Percent_Identity=38.0281690140845, Blast_Score=195, Evalue=3e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32978; Mature: 32978

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILIFEEHRMQLSSEQCDFFFTNGYLVINNFFSESVCDLLKQRIETLLENNQAEIPKTIF
CEEEEEHHHHHCCCCCCCEEEECCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
STQTNEHAKKQYFLDSGDKIHYFFEPGAFDEAGDWLRPFNQSINKIGHALHELDPVFRQY
HCCCCHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRDDRIKKIAHQLGLKTLGLVQSMYIFKQPGIGAEVLCHQDSTYIFGEDSDALGFWFAIE
CCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEECCCCCEEEEEEEE
DATLENGCLEVIPSPCTTPLKQRMFRRENEIYFENFDSSPWPEENSVPLPVKKGALIILH
CCCCCCCHHEECCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEE
GRVPHKSQANFSNQSRHAYTLHLVDISLPYPEKNWLQWPNGIPCL
CCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MILIFEEHRMQLSSEQCDFFFTNGYLVINNFFSESVCDLLKQRIETLLENNQAEIPKTIF
CEEEEEHHHHHCCCCCCCEEEECCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
STQTNEHAKKQYFLDSGDKIHYFFEPGAFDEAGDWLRPFNQSINKIGHALHELDPVFRQY
HCCCCHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRDDRIKKIAHQLGLKTLGLVQSMYIFKQPGIGAEVLCHQDSTYIFGEDSDALGFWFAIE
CCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEECCCCCEEEEEEEE
DATLENGCLEVIPSPCTTPLKQRMFRRENEIYFENFDSSPWPEENSVPLPVKKGALIILH
CCCCCCCHHEECCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEE
GRVPHKSQANFSNQSRHAYTLHLVDISLPYPEKNWLQWPNGIPCL
CCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA