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The map label for this gene is opsX [H]

Identifier: 52842901

GI number: 52842901

Start: 3047264

End: 3048325

Strand: Reverse

Name: opsX [H]

Synonym: lpg2695

Alternate gene names: 52842901

Gene position: 3048325-3047264 (Counterclockwise)

Preceding gene: 52842902

Following gene: 52842900

Centisome position: 89.72

GC content: 41.34

Gene sequence:

>1062_bases
GTGGCTCTCGTTTTGTATTGCAGAATGATTAAATCGGTTTGTGTTATAAGGCTTTCAGCTTTAGGGGATGTTTTGATGTT
GGTCCCACTGATAAGGACCTTGCAAAATAAATTGCCTAATGCTCAATTGACCTGGATTATTTCAAAACCTGCCTTTTATT
TGGTGGAAGGAATGGAAGGCGTGGAGTTTATTGTTATTGATAAACCTAAAACGCTTGCTGACTATTGGCGGTTTAGGAAA
CAAATGTTGCCTCGCCAGTTTGATGTGTTGTTAGCGCCTCAAGCCAGTTTTAGAACTAATTGGCTTATTCCATTTATTAA
AGCTAAACGCAAAGTTGGCTATGATTCTCACAGAGCGAATGATGGCCATCGTCTGTTTATAAGGGAAAGCATTTCTCCTG
GATTGGAGCACACACTTGAGGGCTTTTTAAAATTTGCTGAGCCTTTAGGTGTCACTGAAAAAATAATCCACTGGGATTTA
CCGATTACCAAGGCAGATTATGAATGGGCTCAAAATCATTTGCCGGAACAAGAAAGGCCAATTTTAGTTGTTAATCCCGC
AGCCAGCAAACCTGAGCGCAGTTGGTTGGCGGAGCGATACATTGAGGTTCTGAAACAGGCGCAAGTTAAATGGGATGTCA
AAGTTGTTTTAACCGGAGGGCCAGGCGATCATGATAAATCATTGGCAGAGGAAATAGCGAAAGAAATTCCAGTGGTTAAT
TTAGTTGGAAAGACAAAACCTAAGCAATTGTTGGCTGTGATCAGTAAAGCAAAAGCAGTCTTGTGTCCTGATACAGGACC
TTCTCATATGGCGGCAGCGGTAGGCACGCCTGTTGTGGCTTTGCATGCTGTTACCAATCCCTCTATTTCTGGCCCGTATA
CTTTTCAACATTTGGTAGTTAACAGGTATTCGCAAGCTATCCAAACTGTATTAGGAGTGAGTCCAGAGAAGAGTGTTTGG
GGTACGCAGGTCCATGGATATGAAGCCATGAAATTAATTACCGTAGATGATGTAATGGAAAAATTAACTGAAATATTTTC
AGGACTTATGAACAATACCTAA

Upstream 100 bases:

>100_bases
TTACCATTGAGTTGCCCAACAGATGAGATGGAGTTATGGAATGCTCATCCCAAGGTTTATTTGCCTATAGAGAAAACCGG
GGTGGAGGTTTGCCCTTATT

Downstream 100 bases:

>100_bases
TCTTTGTGCGGGAAAGGCTTTTAATGAGAGCATTTCGCTTATGCTCATTAAAAGCTGTTTGCCCTTACCCTGGTGATTTC
CCCAAGTACTGATTTTGATT

Product: heptosyl transferase glycosyltransferase family 9 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 352

Protein sequence:

>353_residues
MALVLYCRMIKSVCVIRLSALGDVLMLVPLIRTLQNKLPNAQLTWIISKPAFYLVEGMEGVEFIVIDKPKTLADYWRFRK
QMLPRQFDVLLAPQASFRTNWLIPFIKAKRKVGYDSHRANDGHRLFIRESISPGLEHTLEGFLKFAEPLGVTEKIIHWDL
PITKADYEWAQNHLPEQERPILVVNPAASKPERSWLAERYIEVLKQAQVKWDVKVVLTGGPGDHDKSLAEEIAKEIPVVN
LVGKTKPKQLLAVISKAKAVLCPDTGPSHMAAAVGTPVVALHAVTNPSISGPYTFQHLVVNRYSQAIQTVLGVSPEKSVW
GTQVHGYEAMKLITVDDVMEKLTEIFSGLMNNT

Sequences:

>Translated_353_residues
MALVLYCRMIKSVCVIRLSALGDVLMLVPLIRTLQNKLPNAQLTWIISKPAFYLVEGMEGVEFIVIDKPKTLADYWRFRK
QMLPRQFDVLLAPQASFRTNWLIPFIKAKRKVGYDSHRANDGHRLFIRESISPGLEHTLEGFLKFAEPLGVTEKIIHWDL
PITKADYEWAQNHLPEQERPILVVNPAASKPERSWLAERYIEVLKQAQVKWDVKVVLTGGPGDHDKSLAEEIAKEIPVVN
LVGKTKPKQLLAVISKAKAVLCPDTGPSHMAAAVGTPVVALHAVTNPSISGPYTFQHLVVNRYSQAIQTVLGVSPEKSVW
GTQVHGYEAMKLITVDDVMEKLTEIFSGLMNNT
>Mature_352_residues
ALVLYCRMIKSVCVIRLSALGDVLMLVPLIRTLQNKLPNAQLTWIISKPAFYLVEGMEGVEFIVIDKPKTLADYWRFRKQ
MLPRQFDVLLAPQASFRTNWLIPFIKAKRKVGYDSHRANDGHRLFIRESISPGLEHTLEGFLKFAEPLGVTEKIIHWDLP
ITKADYEWAQNHLPEQERPILVVNPAASKPERSWLAERYIEVLKQAQVKWDVKVVLTGGPGDHDKSLAEEIAKEIPVVNL
VGKTKPKQLLAVISKAKAVLCPDTGPSHMAAAVGTPVVALHAVTNPSISGPYTFQHLVVNRYSQAIQTVLGVSPEKSVWG
TQVHGYEAMKLITVDDVMEKLTEIFSGLMNNT

Specific function: Lipopolysaccharide core biosynthesis. [C]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 9 family [H]

Homologues:

Organism=Escherichia coli, GI1790062, Length=292, Percent_Identity=25, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1790051, Length=319, Percent_Identity=21.9435736677116, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1790050, Length=366, Percent_Identity=24.0437158469945, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 39572; Mature: 39441

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: PS00063 ALDOKETO_REDUCTASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALVLYCRMIKSVCVIRLSALGDVLMLVPLIRTLQNKLPNAQLTWIISKPAFYLVEGMEG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCC
VEFIVIDKPKTLADYWRFRKQMLPRQFDVLLAPQASFRTNWLIPFIKAKRKVGYDSHRAN
CEEEEEECCHHHHHHHHHHHHHCCHHHCEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCC
DGHRLFIRESISPGLEHTLEGFLKFAEPLGVTEKIIHWDLPITKADYEWAQNHLPEQERP
CCCEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHEEECCCCCCCCHHHHHHCCCCCCCC
ILVVNPAASKPERSWLAERYIEVLKQAQVKWDVKVVLTGGPGDHDKSLAEEIAKEIPVVN
EEEECCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCHHHHHHHHHHHCCEEE
LVGKTKPKQLLAVISKAKAVLCPDTGPSHMAAAVGTPVVALHAVTNPSISGPYTFQHLVV
ECCCCCHHHHHHHHHHCCEEECCCCCHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHH
NRYSQAIQTVLGVSPEKSVWGTQVHGYEAMKLITVDDVMEKLTEIFSGLMNNT
HHHHHHHHHHHCCCCCCCCCCCEECCCHHEEEEEHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ALVLYCRMIKSVCVIRLSALGDVLMLVPLIRTLQNKLPNAQLTWIISKPAFYLVEGMEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCC
VEFIVIDKPKTLADYWRFRKQMLPRQFDVLLAPQASFRTNWLIPFIKAKRKVGYDSHRAN
CEEEEEECCHHHHHHHHHHHHHCCHHHCEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCC
DGHRLFIRESISPGLEHTLEGFLKFAEPLGVTEKIIHWDLPITKADYEWAQNHLPEQERP
CCCEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHEEECCCCCCCCHHHHHHCCCCCCCC
ILVVNPAASKPERSWLAERYIEVLKQAQVKWDVKVVLTGGPGDHDKSLAEEIAKEIPVVN
EEEECCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCHHHHHHHHHHHCCEEE
LVGKTKPKQLLAVISKAKAVLCPDTGPSHMAAAVGTPVVALHAVTNPSISGPYTFQHLVV
ECCCCCHHHHHHHHHHCCEEECCCCCHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHH
NRYSQAIQTVLGVSPEKSVWGTQVHGYEAMKLITVDDVMEKLTEIFSGLMNNT
HHHHHHHHHHHCCCCCCCCCCCEECCCHHEEEEEHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Transferring other glycosyl groups [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]