Definition | Legionella pneumophila subsp. pneumophila str. Philadelphia 1 chromosome, complete genome. |
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Accession | NC_002942 |
Length | 3,397,754 |
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The map label for this gene is paiA
Identifier: 52841351
GI number: 52841351
Start: 1225771
End: 1226244
Strand: Reverse
Name: paiA
Synonym: lpg1117
Alternate gene names: NA
Gene position: 1226244-1225771 (Counterclockwise)
Preceding gene: 52841352
Following gene: 52841349
Centisome position: 36.09
GC content: 35.65
Gene sequence:
>474_bases ATGGCTATTTACAAATTTGAAATCTCAACTATGCAAAACGGCAATATACAGATATCAGCAAAGCACAAATTAACAGGAGA GATACACGGCTATGTTCAACTCGCCTCATCGGACAGGTTAGAAAGCAGAAATTTGTTAGAAATAGATCAGCTTTATGTTG ACAATAATGCCAGAGGACATGGATTGGGAAGTGAACTTGCCTCAAGAGCCATTAAATATGCTCTTAAAATGGACAAAGGA ATTCATATGATGATTCAACCAGGTTCGGATGTGTTTTGGAAAAAATATTTTAATTCTCGTTTTGATGGAAAACGCATTAC CCTGTTTGGTGGAGAAGCTTTAAATACTAATTTAGCTGATGGAAAAGTATTTGAAATTTCTAAAGAAAGTCTGGTTGCCA ATTACAAATTTCCTCAAGATAGACACTTGCGTGATCGCGATATGGAAAGAATCTGCACCAAACTCTCTAATTAA
Upstream 100 bases:
>100_bases TCTGAATAACTGCTTAGCTGCACTCATCTAATGGAAGCCCGCAAAATAGATTATATGTTATACTAAGTGAAAATTATCTA GGCTTTTATGGGGGCAAAAT
Downstream 100 bases:
>100_bases TAAGTGTCAGGCTCTAAAGCCTGACTTGGTCAAATGAATTACTCACAAACACCATTAATAACACAATTTTTCAATTCTTT TGCAAATTTGAATTGATTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MAIYKFEISTMQNGNIQISAKHKLTGEIHGYVQLASSDRLESRNLLEIDQLYVDNNARGHGLGSELASRAIKYALKMDKG IHMMIQPGSDVFWKKYFNSRFDGKRITLFGGEALNTNLADGKVFEISKESLVANYKFPQDRHLRDRDMERICTKLSN
Sequences:
>Translated_157_residues MAIYKFEISTMQNGNIQISAKHKLTGEIHGYVQLASSDRLESRNLLEIDQLYVDNNARGHGLGSELASRAIKYALKMDKG IHMMIQPGSDVFWKKYFNSRFDGKRITLFGGEALNTNLADGKVFEISKESLVANYKFPQDRHLRDRDMERICTKLSN >Mature_156_residues AIYKFEISTMQNGNIQISAKHKLTGEIHGYVQLASSDRLESRNLLEIDQLYVDNNARGHGLGSELASRAIKYALKMDKGI HMMIQPGSDVFWKKYFNSRFDGKRITLFGGEALNTNLADGKVFEISKESLVANYKFPQDRHLRDRDMERICTKLSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17932; Mature: 17801
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIYKFEISTMQNGNIQISAKHKLTGEIHGYVQLASSDRLESRNLLEIDQLYVDNNARGH CEEEEEEEEEECCCCEEEEECCCCCEEEEEEEEECCCCCCCCCCCEEEEEEEECCCCCCC GLGSELASRAIKYALKMDKGIHMMIQPGSDVFWKKYFNSRFDGKRITLFGGEALNTNLAD CCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCCCCCCEEEEECCCCCCCCCCC GKVFEISKESLVANYKFPQDRHLRDRDMERICTKLSN CEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure AIYKFEISTMQNGNIQISAKHKLTGEIHGYVQLASSDRLESRNLLEIDQLYVDNNARGH EEEEEEEEEECCCCEEEEECCCCCEEEEEEEEECCCCCCCCCCCEEEEEEEECCCCCCC GLGSELASRAIKYALKMDKGIHMMIQPGSDVFWKKYFNSRFDGKRITLFGGEALNTNLAD CCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCCCCCCEEEEECCCCCCCCCCC GKVFEISKESLVANYKFPQDRHLRDRDMERICTKLSN CEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA